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TranscriptomicsNitrogen-regulated genes in Fusarium fujikuroi
Genome-wide search for AreA-dependent and -independent nitrogen-regulated genes in Fusarium fujikuroi by cross-species hybridization with F. verticillioides microarrays. Keywords: glutamine treatmet Compare expression of genes of Fusarium fujikuroi wild-type and areA mutant strains responding to ni...
ORGANISM(S): Gibberella fujikuroi 
2010-05-15 | E-GEOD-10692 | biostudies-arrayexpress
TranscriptomicsThe VELVET complex in the gray mold fungus Botrytis cinerea: impact of BcLAE1 on differentiation, secondary metabolism and virulence
Full transcriptomes of the Botrytis cinerea wild-type strain B0510 and the null-mutants deltaBcVEL1 and deltaBcLAE1, cultured onto solid grape juice medium with cellophane overlays , were compared to identify BcVEL1 or/and BcLAE1-dependent genes. The Botrytis cinerea wild-type strain and the null-m...
ORGANISM(S): Botrytis cinerea 
2015-02-01 | E-GEOD-63021 | biostudies-arrayexpress
ProteomicsGenome-wide functional analysis of AreA and AreB
"Background: The ascomycete Fusarium fujikuroi causes “bakanae” disease of rice due to its ability to produce gibberellins (GA), but is also known for producing a broad spectrum of other secondary metabolites, (SM) such as pigments and harmful mycotoxins. Biosynthesis of multiple SM is regulated by ...
ORGANISM(S): Fusarium fujikuroi IMI 58289 
2017-04-26 | PXD004664 | Pride
Phosphoproteomics Fusarium fujikuroi Label-free quantification 
TranscriptomicsGenome-wide analyses of Fusarium fujikuroi reveal complex regulation of secondary metabolism and new metabolites
Investigation of whole genome gene expression of the Fusarium fujikuroi wild type IMI58289 under gibberellin-inducing and -repressing conditions. Fusarium fujikuroi is a biotechnologically important fungus due to its almost unique ability to produce gibberellic acids (GAs), a family of phytohormone...
ORGANISM(S): Fusarium fujikuroi 
2013-07-01 | E-GEOD-43745 | biostudies-arrayexpress
TranscriptomicsThe global regulator FfSge1 is required for expression of secondary metabolite gene clusters but not for pathogenicity in Fusarium fujikuroi
The phytopathogenic fungus Fusarium fujikuroi is the causal agent of bakanae disease on rice due to its ability to produce gibberellins. Besides these phytohormones, F. fujikuroi is able to produce a wide range of other secondary metabolites (SMs), such as mycotoxins and pigments. Although much prog...
ORGANISM(S): Fusarium fujikuroi 
2014-10-08 | E-GEOD-53977 | biostudies-arrayexpress
GenomicsKnock-down of the methyltransferase Kmt6 reliefs H3K27me3 and results in induction of cryptic and otherwise silent secondary metabolite gene clusters in Fusarium fujikuroi [ChIP-seq]
We performed ChIP-seq of H3K27me3 in wild type Fusarium fujikuroi grown in synthetic ICI medium with low nitrogen conditions. Three replicates of F. fujikuroi wild-type strain were grown in low nitrogen. ChIP-Seq was performed with anti-H3K27me3 antibody.
ORGANISM(S): Fusarium fujikuroi 
2016-07-04 | E-GEOD-80478 | biostudies-arrayexpress
TranscriptomicsThe classical histone deacetylases FfHdF1 and FfHdF2 are both major regulators of secondary metabolism in Fusarium fujikuroi
Histone modifications have been shown to be crucial for secondary metabolism in various filamentous fungi. Here we studied the influence of histone acetylation on secondary metabolite production in the phytopathogenic fungus Fusarium fujikuroi, a known producer of several secondary metabolites inclu...
ORGANISM(S): Fusarium fujikuroi 
2013-10-05 | E-GEOD-43768 | biostudies-arrayexpress
TranscriptomicsKnock-down of the methyltransferase Kmt6 reliefs H3K27me3 and induces expression of cryptic otherwise silent secondary metabolite gene clusters in Fusarium fujikuroi [gene expression]
Filamentous fungi produce a vast array of secondary metabolites (SMs) and some of them are applied in agriculture or pharmacology. Recent sequencing of the rice pathogen Fusarium fujikuroi revealed the presence of far more SM-encoding genes than known products. SM production is energy-consuming and ...
ORGANISM(S): Fusarium fujikuroi 
2016-07-04 | E-GEOD-80477 | biostudies-arrayexpress
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