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TranscriptomicsRetrograde signalling during caused by heritable mitochondrial dysfunction is partly mediated by ANAC017 and improves plant performance.
Mitochondria are crucial for plant viability and are able to communicate information on their functional status to the cellular nucleus via retrograde signalling, thereby affecting gene expression. It is currently unclear if retrograde signalling in response to constitutive mitochondrial biogenesis ...
ORGANISM(S): Arabidopsis thaliana 
2016-07-28 | E-MTAB-4655 | biostudies-arrayexpress
TranscriptomicsRibo-seq of Arabidopsis mTRAN double mutants
mTRAN proteins are are plant specific-components of the mitoribosome. To asses of loss-of-function mtran1 mtran2 double mutants show decreased translation rates, we performed ribosome footprinting coupled to RNA-seq (Ribo-seq).
ORGANISM(S): Arabidopsis thaliana 
2023-09-01 | E-MTAB-13059 | biostudies-arrayexpress
TranscriptomicsThe outer mitochondrial membrane AAA ATPase AtOM66 affects cell death and pathogen resistance in Arabidopsis thaliana
3 week old AtOM66 overexpression and knockout plants were compared to wild type Col-0 plants during a drought stress time course. Samples were taken 2 days after last watering (untreated), 9 days (early drought) and 11 days (late drought).
ORGANISM(S): Arabidopsis thaliana 
2014-10-30 | E-MTAB-3044 | biostudies-arrayexpress
TranscriptomicsRNA-immunoprecipitation of mTRAN1-GFP
mTRAN proteins are components of the plant mitochondrial small subunits, thought to bind the mRNA 5' regions to initiate translation. This experiment was designed to identify the mTRAN1 binding regions on the plant mitochondrial mRNAs
ORGANISM(S): Arabidopsis thaliana 
2023-09-01 | E-MTAB-13060 | biostudies-arrayexpress
TranscriptomicsDark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
The role of ANAC017 in leaf senescence was assessed by covering leaf 6-7 of 5 week old plants. Samples of Col-0, anac017 knock-out and two ANAC017 overexpression lines were compared of day 0, 1 and 3 of the timecourse. ANAC017 OE lines show accelerated senescence during this time.
ORGANISM(S): Arabidopsis thaliana 
2021-05-06 | E-MTAB-8478 | biostudies-arrayexpress
TranscriptomicsTranscript profiling of Arabidopsis thaliana transgenic seedlings constitutively overexpressing UGT74E2 (35S::UGT74E2).
Transcript profiling of transgenic Arabidopsis thaliana seedlings constitutively overexpressing UGT74E2 (35S::UGT74E2).
ORGANISM(S): Arabidopsis thaliana 
2009-09-19 | E-MEXP-2358 | biostudies-arrayexpress
ProteomicsA MYC2, MYC3, MYC4-dependent transcription factor network regulates touch responses in plants
Plants are continuously exposed to environmental triggers, including mechanical stimulation. Our results demonstrate that jasmonic acid (JA)-signalling plays a key role in very early gene expression changes, well before it leads to touch-induced developmental changes. We show that the JA-activated t...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-10-29 | PXD014008 | Pride
Touch respose Arabidopsis Myc2 
TranscriptomicsExpression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue
Mitochondrial stress stimuli such as AA caused a transient suppression of auxin signaling and conversely, auxin treatment represses a part of the response to AA treatment. Expression data of Col:LUC Arabidopsis treated with antimycin A (AA) in the presence or absence of a synthetic auxin analogue To...
ORGANISM(S): Arabidopsis thaliana 
2014-06-01 | E-GEOD-57140 | biostudies-arrayexpress
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