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MetabolomicsMapping immune variation and var gene switching in naive hosts infected with Plasmodium falciparum
Falciparum malaria is clinically heterogeneous and the relative contribution of parasite and host in shaping disease severity remains unclear. We explored the interaction between inflammation and parasite variant surface antigen (VSA) expression, asking whether this relationship underpins the variat...
2020-12-02 | MTBLS1188 | MetaboLights
TranscriptomicsHP1a, Su(var)3-9, SETDB1 and POF stimulate or repress gene expression depending on genomic position, gene length and expression pattern in Drosophila melanogaster
Heterochromatin protein 1a (HP1a) is a chromatin associated protein that has been well studied in many model organisms, such as Drosophila, where it is a determining factor for classical heterochromatin. HP1a is associated with the two histone methyltransferases SETDB1 and Su(var)3-9, which mediate ...
ORGANISM(S): Drosophila melanogaster 
2013-04-05 | E-GEOD-43478 | biostudies-arrayexpress
ProteomicsComparative transcriptomic and proteomic analyses reveal multiple differences associated with albino leaves in Ananas comosus var. Bracteatus
Ananas comosus var. bracteatus has high ornamental value and widespread application because of its chimeric leaves. However, little is known about the molecular mechanism regulating this characteristic. Here, comparative transcriptomic and proteomic analyses of the white parts (Whs) and green parts ...
ORGANISM(S): Ananas comosus var. bracteatus 
2019-06-10 | PXD010375 | Pride
Molecular mechanism Chimeric leaves Proteome Ananas comosus var. bracteatus Transcriptome 
TranscriptomicsMolecular Analysis of the Genes Involved in Aroma Synthesis in the Species S. cerevisiae, S. kudriavzevii and S. bayanus var. uvarum in Winemaking
This research work investigates the hybridization of the genes of Saccharomyces bayanus var. uvarum CECT 12600 and S. kudriavzevii IFO1802 employing S. cerevisiae microarrays. Two strains,one S. kudriavzevii and one S. bayanus var. uvarum were employed for the study. The S. cerevisiae strain S288C w...
ORGANISM(S): Saccharomyces uvarum 
2014-06-23 | E-GEOD-52446 | biostudies-arrayexpress
GenomicsPanicum hallii var. filipes cultivar:var. Filipes
Panicum hallii var Filipes genome sequencing
PRJNA370715 | ENA
TranscriptomicsSmall RNA sequencing of control and Su(var)3-7 mutant Drosophila ovary
Comparison of small RNA fractions derived from piRNA clusters and transposon sequences in control and Su(var)3-7 null mutant. Small RNA profile of 3-day old control and Su(var)3-7 mutant ovaries were generated by high-throughput sequencing on Illumina HiSeq 2000
ORGANISM(S): Drosophila melanogaster 
2014-05-12 | E-GEOD-53015 | biostudies-arrayexpress
GenomicsPinus kesiya var. langbianensis
Transcriptome sequencing of Pinus kesiya var. langbianensis
PRJNA412687 | ENA
ProteomicsEffects of arbuscular mycorrhizal fungi on Pteris cretica L var. nervosa fronds antimony enrichment, morphology and proteome changes during antimony phytoremediation
Pteris cretica L var. nervosa is one of the dominent fern species at antimony mining area where arbuscular mycorrhizal fungi can be found as a symbiosis. The effect of AMF on fern exposed to long-term excessive Sb was pooly understood. The project applied this fern co-cultivting with or withour AMF ...
ORGANISM(S): Pteris cretica var. nervosa 
2024-01-19 | PXD012678 | Pride
Arbuscular mycorrhizal fungi Antimony phytoremediation Pteris cretica l var. nervosa Long-term exposure Fronds proteomic identification 
TranscriptomicsTranscriptionnal analysis of a Photorhabdus luminescens TT01 variant, named VAR*, which is a colonial and phenotypic variant displaying delayed pathogenicity in the insect, Spodoptera littoralis.
Photorhabdus luminescens lives in a mutualistic association with entomopathogenic nematodes and is pathogenic for insects. Variants of Photorhabdus frequently arise. VAR* is a colonial and phenotypic variant displaying delayed pathogenicity in the insect, Spodoptera littoralis. In this study, we eva...
ORGANISM(S): Photorhabdus luminescens subsp. laumondii TTO1 
2010-10-13 | E-GEOD-24627 | biostudies-arrayexpress
GenomicsOcimum basilicum var. basilicum cultivar:var. basilicum
Ocimum basilicum var. basilicum cultivar:var. basilicum Genome sequencing and assembly
PRJNA949446 | ENA
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