Virulence-activated genes

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Unknown (539)
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Organisms

Homo sapiens (41)
Mus musculus (26)
Pseudomonas aeruginosa (15)
Candida albicans (11)
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Staphylococcus aureus (10)
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Pseudomonas aeruginosa PAO1 (7)
Streptococcus pyogenes (7)
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Macaca mulatta (2)
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Campylobacter jejuni (2)
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Drosophila melanogaster (2)
Lathyrus sativus (1)

Organisms

Pseudomonas aeruginosa (7)
Staphylococcus aureus (5)
Cryptococcus neoformans H99 (4)
Streptococcus pyogenes (4)
Mus musculus (4)
Salmonella enterica subsp. enterica serovar Typhimurium (3)
Pseudomonas aeruginosa PAO1 (3)
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 (2)
Caulobacter vibrioides (2)
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Candida albicans (2)
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Fusobacterium nucleatum (1)
Brucella melitensis bv. 1 str. 16M (1)
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Chlorocebus sabaeus (1)
Aliivibrio fischeri (1)
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Bacillus cereus ATCC 14579 (1)
Nakaseomyces glabratus (1)
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2005 (5)
2024 (5)
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2020 (4)
2019 (4)
2021 (3)
2004 (1)

UNIPROT ID/AC

14331_ORYSJ (1)
14332_ORYSJ (1)
14333_ORYSJ (1)
14334_ORYSJ (1)
14335_ORYSJ (1)
14336_ORYSJ (1)
2ABA_ORYSJ (1)
40C1_ORYSJ (1)
40G2_ORYSJ (1)
40G3_ORYSJ (1)
4CL3_ORYSJ (1)
4CL4_ORYSJ (1)
4CLL1_ORYSJ (1)
4CLL4_ORYSJ (1)
4CLL5_ORYSJ (1)
6PGD1_ORYSJ (1)
6PGD2_ORYSJ (1)
6PGL2_ORYSJ (1)
6PGL3_ORYSJ (1)
6PGL4_ORYSJ (1)
A0A024FLK4_ORYSJ (1)
A0A0N7KC78_ORYSJ (1)
A0A0N7KD71_ORYSJ (1)
A0A0N7KDZ0_ORYSJ (1)
A0A0N7KE18_ORYSJ (1)
A0A0N7KE80_ORYSJ (1)
A0A0N7KEH6_ORYSJ (1)
A0A0N7KET0_ORYSJ (1)
A0A0N7KEW3_ORYSJ (1)
A0A0N7KF42_ORYSJ (1)

CHEBI ID

CHEBI:15940 (3)
CHEBI:15344 (2)
CHEBI:15428 (2)
CHEBI:16856 (2)
CHEBI:30763 (2)
CHEBI:18183 (2)
CHEBI:33508 (2)
CHEBI:28300 (2)
CHEBI:15728 (2)
CHEBI:15741 (2)
CHEBI:25094 (2)
CHEBI:16414 (2)
CHEBI:18012 (2)
CHEBI:36632 (2)
CHEBI:16857 (2)
CHEBI:15756 (2)
CHEBI:18287 (2)
CHEBI:192672 (1)
CHEBI:192668 (1)
CHEBI:192663 (1)
CHEBI:164184 (1)
CHEBI:160379 (1)
CHEBI:192658 (1)
CHEBI:192654 (1)
CHEBI:158305 (1)
CHEBI:192653 (1)
CHEBI:161806 (1)
CHEBI:161576 (1)
CHEBI:192649 (1)
CHEBI:192644 (1)

Metabolite Name

4-Guanidinobutyric acid (3)
Octadeca-11E,13E,15Z-trienoic acid (2)
3-Succinoylpyridine (2)
Guvacoline (2)
N-Acetyl-D-galactosamine (2)
S-Methyl-L-cysteine (2)
Phellamurin (2)
2-Phenylethylamine (2)
1-Methyladenine (2)
N6-Acetyl-L-lysine (2)
Coumarin (2)
N-Acetylputrescine (2)
L-Ornithine (2)
Hypoxanthine (2)
L-Pyroglutamic acid (2)
DL-Tryptophan (2)
L-Phenylalanine (2)
L-Tyrosine (2)
Betaine (2)
Guanine (2)
Choline (2)
L-Valine (2)
Histamine (2)
18-alpha-Glycyrrhetinic acid (1)
Lysopc 16:2 (1)
8(R)-Hydroxy-(5Z,9E,11Z,14Z)-eicosatetraenoic acid (1)
2,3-Dinor-11alpha-prostaglandin F2alpha (1)
3,3-dimethyl-1-[4-(trifluoromethoxy)phenyl]piperidine-2,6-dione (1)
Ethyl 2-cyano-3-[(2-oxoazepan-3-yl)amino]acrylate (1)
3,4-Methylenedioxy-¦Á-pyrrolidinopropiophenone (1)

First Public Date

2014 (28)
2016 (12)
2026 (8)
2024 (8)
2019 (8)
2020 (7)
2018 (7)
2023 (5)
2022 (5)
2021 (5)
2017 (4)
2025 (3)
2015 (2)
2013 (1)

Classification

bacteria (44)
fungi (9)
protozoa (1)

Study type

Transcription profiling by array (171)
RNA-seq of coding RNA (29)
Unknown experiment type (15)
ChIP-seq (5)
Transcription profiling by RT-PCR (3)
Cell line - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
Comparative genomic hybridization by array (1)
MicroRNA profiling by array (1)
RNA-seq of non coding RNA (1)

Release Date

2010 (64)
2013 (49)
2022 (47)
2012 (46)
2023 (43)
2011 (41)
2020 (41)
2016 (38)
2015 (36)
2021 (36)
2024 (35)
2017 (33)
2014 (33)
2009 (30)
2018 (29)
2025 (28)
2019 (28)
2008 (22)
2007 (18)
2006 (16)
2005 (12)
2004 (7)
2003 (7)
2002 (7)
2001 (7)
2000 (6)
2026 (4)
1999 (4)
1998 (2)

Lab affiliation

CSO, Bioaster, France (1)
Dr. Andreas Otto Institute for Microbiology Department of Microbial Proteomics Ernst-Moritz-Arndt-University Greifswald F.-L.-Jahn-Str. 15 17489 Greifswald phone: +49 3834 4205920 fax: +49 3834 4205902 (1)
Institut Pasteur, Université Paris Cité, CNRS UMR3528, Biochimie des Interactions Macromoléculaires, F-75015 Paris, France (1)
Universitat de Barcelona. Parc Cientific de Barcelona. Proteomics Lab. (1)
University Medicine Greifswald (1)

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A hierarchical transcriptional network controls appressorium-mediated plant infection by the rice blast fungus Magnaporthe oryzae

Rice blast is a pervasive and devastating disease that threatens rice production across the world. In spite of its importance to global food security, however, the underlying biology of plant infection by the blast fungus Magnaporthe oryzae remains poorly understood. In particular, it is unclear how...

ORGANISM(S): Pyricularia Oryzae

2022-09-05 | PXD028052 | panorama

AI-2-dependent gene regulation in Staphylococcus epidermidis

Autoinducer 2 (AI-2), a widespread by-product of the LuxS-catalyzed S-ribosylhomocysteine cleavage reaction in the activated methyl cycle, has been suggested to serve as an intra- and interspecies signaling molecule, but in many bacteria AI-2 control of gene expression is not completely understood. ...

ORGANISM(S): Staphylococcus epidermidis

2008-10-10 | E-GEOD-9427 | biostudies-arrayexpress

Salmonella typhimurium igaA(T191P) and related

We have exploited a spontaneously isolated mutant IgaA(T191P) that is near-maximally activated for the Rcs system, to identify a vast set of genes that respond, and report new regulatory properties of this signaling system in Salmonella enterica serovar Typhimurium. Microarray data show that the Rcs...

ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium

2008-06-24 | E-GEOD-9584 | biostudies-arrayexpress

Phosphoproteomic and Metabolomic Profiling Uncovers the Roles of CcPmk1 in the Pathogenicity of Cytospora chrysosperma

Pmk1, a highly conserved pathogenicity-related mitogen-activated protein kinase (MAPK) in pathogenic fungi, is phosphorylated and activated by MAP2K and acts as a global regulator of fungal infection and invasive growth by modulating downstream targets. However, the hierarchical CcPmk1 regulatory...

2022-07-11 | MTBLS4463 | MetaboLights

A novel extracytoplasmic function (ECF) sigma factor regulates virulence in Pseudomonas aeruginosa

Next to the two-component and quorum sensing systems, cell-surface signaling (CSS) has been recently identified as an important regulatory system in Pseudomonas aeruginosa. CSS senses signals from outside the cell and transmits them into the cytoplasm. It consists of a TonB-dependent outer membrane ...

ORGANISM(S): Pseudomonas aeruginosa

2009-04-21 | E-GEOD-15697 | biostudies-arrayexpress

Mitigation of quorum sensing mediated virulence factors of Pseudomonas aeruginosa: the role of Meldrum's acid activated furan.

Not available

S-EPMC10791761 | biostudies-literature

Metagenomic profiling of antibiotic resistance and virulence removal: Activated sludge vs. algal wastewater treatment system.

Not available

S-EPMC8338905 | biostudies-literature

Mitogen-activated protein kinases are associated with the regulation of physiological traits and virulence in Fusarium oxysporum f. sp. cubense.

Not available

S-EPMC4388850 | biostudies-literature

The Role of Mitogen-Activated Protein (MAP) Kinase Signaling Components in the Fungal Development, Stress Response and Virulence of the Fungal Cereal Pathogen Bipolaris sorokiniana.