Walker M A MA - OmicsDI

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Unknown (1808)
Proteomics (43)
Genomics (30)
Transcriptomics (16)
Metabolomics (6)

Organisms

Homo sapiens (42)
Mus musculus (10)
Escherichia coli (4)
Chlamydomonas reinhardtii (3)
Nasonia vitripennis (2)
Klebsiella pneumoniae (2)
Klebsiella variicola (2)
Staphylococcus aureus (2)
Streptococcus pyogenes (2)
Rhodospirillum rubrum (1)
Populus x canadensis (1)
Porphyromonas gingivalis (1)
Vitis vinifera (1)
Acharia stimulea (1)
Ammoxenus amphalodes (1)
Arma chinensis (1)
Bos taurus (1)
Candida albicans SC5314 (1)
Comana monomorpha (1)
Doratifera vulnerans (1)
Ectomocoris (1)
Giardia lamblia ATCC 50803 (1)
Lampona murina (1)
Megalopyge opercularis (1)
Ochrogaster lunifer (1)
Oncocephalus (1)
Plasmodium berghei ANKA (1)
Rattus norvegicus (1)
Rhytidoponera metallica (1)
Saccharomyces cerevisiae (1)

Organisms

Populus x canadensis (1)

Repository

pride (43)
EGA (26)
biostudies-arrayexpress (18)
MetaboLights (6)
ENA (2)

Tissue

Cell culture (13)
Permanent cell line cell (4)
Venom (4)
Embryonic stem cell (2)
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Venom gland (2)
Acute myeloid leukemia cell (1)
Blood plasma (1)
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Cuticle (1)
Epidermal cell (1)
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Neuronal stem cell (1)
Periodontal ligament (1)
Saliva (1)

Disease

Amyotrophic lateral sclerosis (4)
Frontotemporal dementia (2)
With bone lytic lesion (1)
Breast carcinoma (1)
Cardiovascular system disease (1)
Developmental and epileptic encephalopathy 2 (1)
Giardiasis (1)
Inflammation (1)
Kidney disease (1)
Laboratory infectious disease (1)
Lung cancer (1)
Malaria (1)
Neurodevelopmental abnormality (1)

Technology Type

Mass Spectrometry (43)
Shotgun proteomics (27)
Top-down proteomics (9)
Illumina 15K (8)
Mass spectrometry (5)
Bottom-up proteomics (5)
Affinity purification coupled with mass spectrometry proteomics (4)
SWATH MS (4)
Data-dependent acquisition (3)
Gel-based experiment (3)
Illumina HiSeq 2500, Illumina HiSeq 2000 (2)
MSE (2)
NMR spectroscopy (1)
Affinity proteomics (1)
Data-independent acquisition (1)
HDMSE (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (4)
Liquid Chromatography MS - positive - reverse phase (4)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Liquid Chromatography MS - negative - hilic (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2021 (12)
2024 (6)
2025 (6)
2023 (6)
2013 (5)
2010 (5)
2019 (5)
2015 (4)
2022 (4)
2026 (3)
2017 (3)
2018 (2)
2014 (1)
2012 (1)
2011 (1)
2009 (1)
2007 (1)
2006 (1)

CHEBI ID

CHEBI:15741 (3)
CHEBI:17368 (3)
CHEBI:32816 (3)
CHEBI:15428 (2)
CHEBI:16027 (2)
CHEBI:16335 (2)
CHEBI:16919 (2)
CHEBI:17148 (2)
CHEBI:17268 (2)
CHEBI:17295 (2)
CHEBI:17351 (2)
CHEBI:17509 (2)
CHEBI:17568 (2)
CHEBI:17596 (2)
CHEBI:17665 (2)
CHEBI:18012 (2)
CHEBI:18237 (2)
CHEBI:22653 (2)
CHEBI:22660 (2)
CHEBI:25017 (2)
CHEBI:25094 (2)
CHEBI:28044 (2)
CHEBI:28300 (2)
CHEBI:28842 (2)
CHEBI:29016 (2)
CHEBI:30769 (2)
CHEBI:30772 (2)
CHEBI:37084 (2)
CHEBI:6650 (2)
CHEBI:76233 (2)

Metabolite Name

Glucose (2)
Glucose 6-phosphate (2)
Glycine (2)
Myo-Inositol (2)
Trehalose (2)
1-octadecyl-sn-glycero-3-phosphoinositol-3-phosphate (1)
11-dehydrocorticosterone (1)
18-hydroxycorticosterone (1)
18-nonadecynoic acid (1)
2-Deoxyglucose phosphate (1)
2-hydroxyoctanoic acid (1)
3-Hydroxybutyrate (1)
3-Hydroxyisovalerate (1)
4-Deoxythreonic acid (1)
9,10,13-Trihydroxystearic acid (1)
9,10,18-trihydroxyoctadecanoic acid (1)
Acetate (1)
Acetoin (1)
Alanine (1)
Aldosterone (1)
Alpha-Linolenic acid (1)
Alpha-Tocopherol (1)
Antheraxanthin (1)
Arginine (1)
Ascorbic acid (1)
Asparagine (1)
Aspartate (1)
Azelaic acid (1)
Behenyl linolenate (1)
Benzoic acid (1)

First Public Date

2021 (1)
2014 (1)

Modification

15.994915 (1)
57.021464 (1)

Study type

Transcription profiling by array (10)
RNA-seq of coding RNA (4)
Methylation profiling by high throughput sequencing (2)
Genotyping by array (1)
Comparative genomic hybridization by array (1)

Release Date

2022 (191)
2021 (175)
2023 (163)
2025 (159)
2024 (152)
2018 (117)
2019 (110)
2020 (109)
2014 (86)
2015 (75)
2016 (73)
2017 (71)
2013 (70)
2012 (61)
2011 (54)
2010 (50)
2009 (33)
2008 (27)
2026 (23)
2007 (8)
2006 (6)
2005 (4)
2004 (4)
2001 (2)
2003 (1)
2002 (1)
1999 (1)

Lab affiliation

Bioplatforms Australia (7)
Institute for Molecular Biosciences, The University of Queensland (3)
Program in Molecular Medicine, UMass Chan Medical School (2)
1 Cambridge Systems Biology Centre, University of Cambridge, Cambridge, UK 2 Cambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge, Cambridge, UK 3 Department of Biochemistry, University of Cambridge, Cambridge, UK (1)
Associate Professor, Division of Hematology, Department of Internal Medicine, The Ohio State University Wexner Medical Center (1)
Astbury Centre for Structural Molecular Biology and School of Molecular and Cellulat Biology, University of Leeds (1)
Australian Proteome Analysis Facility, Macquarie University, North Ryde, NSW, 2109, Australia (1)
Babraham Institute Cambridge, UK (1)
Bioplatforms Australia (project manager) (1)
Bristol Renal University of Bristol UK (1)
Centre for Advanced Imaging, The University of Queensland, St Lucia, QLD 4072, Australia. Centre for Biodiversity Dynamics, Department of Biology, NTNU, N-7491 Trondheim, Norway Centre for Ecological and Evolutionary Synthesis, Department of Biosciences, University of Oslo, 0316 Oslo, Norway (1)
Centre for MND Research, Department of Biomedical Sciences, Faculty of Medicine, Health and Human Sciences, Macquarie University, North Ryde, NSW, 209, Australia (1)
Centro de Investigación y Desarrollo en Inmunología y Enfermedades Infecciosas (CIDIE), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)/Universidad Católica de Córdoba (UCC). Córdoba, Argentina. Facultad de Ciencias de la Salud, Universidad Católica de Córdoba (UCC). Córdoba, Argentina. (1)
Chemistry & Chemical Biology, Harvard University, 12 Oxford Street, Cambridge, MA 02138 and Department of Microbiology, Harvard Medical School, 4 Blackfan Circle, Boston, MA 02115 (1)
Department of Biochemistry and Molecular Biology, Section for Biomedical Mass Spectrometry and Systems Biology, University of Southern Denmark (1)
Department of Biochemistry, University of Cambridge (1)
Department of Biomedical Sciences, Macquarie University, North Ryde, NSW, 2109, Australia (1)
Department of Botany and Zoology Faculty of Science, Masaryk University Kotlarska 2, 611 37 Brno, Czech Republic (1)
Department of Entomology School of Plant Protection Nanjing Agricultural University Nanjing, Jiangsu province China (1)
Department of Molecular Microbiology and Molecular Medicine, Faculty of Medicine, University of Geneva, Switzerland (1)
Deptartment of Orthodontics, University Clinic of Dental Medicine, University of Geneva (1)
Group Leader, Institute for Molecular Biosciences, The University of Queensland, Australia (1)
Imperial College London (1)
Institute for Molecular Bioscience, The University of Queensland, Australia (1)
Institute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia. (1)
Institute for Molecular Bioscience, The University of Queensland, St Lucia, QLD 4072, Australia (1)
Institute of Cancer Sciences 1st floor, Wolfson Molecuar Imaging Centre 27 Palatine Road Withington Manchester M20 3LJ (1)
Memorial Sloan Kettering Cancer Center (1)
NHMRC Principal Research Fellow Editor-in-Chief, Toxicon & Toxicon:X Theme Leader, Australian Research Council Centre of Excellence for Innovations in Peptide & Protein Science Deputy Head, Division of Chemistry & Structural Biology Institute for Molecular Bioscience The University of Queensland (1)
Neurodegeneration Pathobiology Laboratory, Queensland Brain Institute, The University of Queensland, Brisbane, QLD, Australia (1)

Tags

xref:PubMed:18721163 (1)
xref:PubMed:35450835 (1)

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Temperature-Induced Phase Transition in 2D Alkylammonium Lead Halide Perovskites: A Molecular Dynamics Study.

Not available

S-EPMC11363124 | biostudies-literature

An IcmF family protein, ImpLM, is an integral inner membrane protein interacting with ImpKL, and its walker a motif is required for type VI secretion system-mediated Hcp secretion in Agrobacterium tumefaciens.

Not available

S-EPMC2698499 | biostudies-literature

The predatory stink bug Arma chinensis (Hemiptera: Pentatomidae) produces a complex proteinaceous venom to overcome caterpillar prey

Predatory bugs capture prey by injecting venom from their salivary glands using specialized stylets. Understanding venom function has been impeded by a scarcity of knowledge of their venom composition. We therefore examined the proteinaceous components of the salivary venom of the predatory stink bu...

ORGANISM(S): Arma chinensis

2023-07-20 | PXD040272 | Pride

Inhibition of glycolysis and mitochondrial respiration promotes radiosensitisation of neuroblastoma and glioma cells

BACKGROUND: Neuroblastoma accounts for 7% of paediatric malignancies but is responsible for 15% of all childhood cancer deaths. Despite rigorous treatment involving chemotherapy, surgery, radiotherapy and immunotherapy, the 5-year overall survival rate of high-risk disease remai...

2022-11-30 | MTBLS858 | MetaboLights

Exome sequencing and functional validation in zebrafish identify GTDC2 mutations as a cause of Walker-Warburg syndrome.

Not available

S-EPMC3512000 | biostudies-literature

Eupolyphaga sinensis walker displays inhibition on hepatocellular carcinoma through regulating cell growth and metastasis signaling.

Not available

S-EPMC4076680 | biostudies-literature

Structures of maintenance of carboxysome distribution Walker-box McdA and McdB adaptor homologs.

Not available

S-EPMC6582323 | biostudies-literature

A Novel Approach to Characterize the Lipidome of Marine Archaeon Nitrosopumilus maritimus by Ion Mobility Mass Spectrometry

Archaea are differentiated from the other two domains of life by their biomolecular characteristics. One such characteristic is the unique structure and composition of their lipids. Characterization of the whole set of lipids in a biological system (the lipidome) remains technologically challengi...

2021-12-16 | MTBLS3714 | MetaboLights

The Metabolic Fate of Oxaliplatin in the Biological Milieu Investigated During In Vivo Lung Perfusion Using a Unique Miniaturized Sampling Approach Based on Solid-Phase Microextraction Coupled with Liquid Chromatography-Mass Spectrometry

Adjuvant chemotherapy after pulmonary metastasectomy for colorectal cancer may reduce recurrence and improve survival rates; however, the benefits of this treatment are limited by the significant side effects that accompany it. The development of a novel in vivo lung perf...

2022-08-02 | MTBLS4982 | MetaboLights

F11R is a novel monocyte prognostic biomarker for malignant glioma [Seq]

Objective: Brain tumors (gliomas) contain large populations of infiltrating macrophages and recruited microglia, which in experimental murine glioma models promote tumor formation and progression. Among the barriers to understanding the contributions of these stromal elements to high-grade glioma (g...

ORGANISM(S): Mus musculus

2013-11-13 | E-GEOD-46688 | biostudies-arrayexpress

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1903 Results

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Organisms

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BACKGROUND: Neuroblastoma accounts for 7% of paediatric malignancies but is responsible for 15% of all childhood cancer deaths. Despite rigorous treatment involving chemotherapy, surgery, radiotherapy and immunotherapy, the 5-year overall survival rate of high-risk disease remai...

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