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Unknown
(3120)
Transcriptomics
(39)
Proteomics
(22)
Genomics
(15)
Metabolomics
(9)
Models
(5)
Genomic
(1)
Organisms
Homo sapiens
(48)
Mus musculus
(9)
Rattus norvegicus
(5)
Saccharomyces cerevisiae
(4)
Zea mays
(3)
Ascaris suum
(2)
Macaca mulatta
(1)
Pseudomonas aeruginosa
(1)
330
(1)
Anaerostipes caccae L1-92
(1)
Bacteroides thetaiotaomicron
(1)
Bifidobacterium longum NCC2705
(1)
Blautia producta ATCC 27340 = DSM 2950
(1)
Clostridium butyricum DSM 10702
(1)
Escherichia coli str. K-12 substr. MG1655
(1)
Gallus gallus
(1)
Lactiplantibacillus plantarum
(1)
Thomasclavelia ramosa DSM 1402
(1)
Repository
biostudies-arrayexpress
(40)
pride
(19)
EGA
(14)
MetaboLights
(9)
BioModels
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MassIVE
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dbGaP
(1)
Tissue
Cell culture
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B cell
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Blood
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Lung
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Nerve
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Oligodendrocyte
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Permanent cell line cell
(1)
Prostate epithelium
(1)
Striated muscle cell
(1)
Striated muscle tissue
(1)
Tooth enamel
(1)
Disease
Crohn's disease
(4)
Normal
(1)
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(1)
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(1)
Duchenne muscular dystrophy
(1)
Malignant peripheral nerve sheath tumor
(1)
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(1)
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(1)
Oligodendroglioma
(1)
Prostate cancer
(1)
Technology Type
Mass Spectrometry
(19)
Shotgun proteomics
(11)
Illumina 15K
(8)
Mass spectrometry
(7)
Bottom-up proteomics
(3)
Mass spectrometry assay
(2)
Affinity purification coupled with mass spectrometry proteomics
(2)
Data-dependent acquisition
(2)
Gel-based experiment
(1)
SWATH MS
(1)
Instrument Platform
Exactive (Thermo Scientific)
(3)
Illumina Genome Analyzer IIx
(2)
Orbitrap Fusion Lumos
(2)
Q Exactive Plus
(2)
Gas Chromatography MS - positive
(2)
Liquid Chromatography MS - alternating - reverse phase
(2)
Illumina HiSeq 4000
(1)
Liquid Chromatography MS - alternating - hilic
(1)
Liquid Chromatography MS - negative - hilic
(1)
Liquid Chromatography MS - negative - reverse phase
(1)
Liquid Chromatography MS - negative - reverse phase - Exactive (Thermo Scientific)
(1)
Liquid Chromatography MS - positive - HILIC - Exactive (Thermo Scientific)
(1)
Publication Date
2014
(8)
2024
(7)
2008
(7)
2025
(6)
2016
(6)
2021
(5)
2020
(4)
2011
(4)
2009
(4)
2017
(4)
2013
(3)
2012
(3)
2022
(3)
2019
(3)
2015
(2)
2007
(2)
2026
(2)
2023
(2)
2010
(1)
UNIPROT ID/AC
P02741
(4)
P05231
(4)
P08887
(4)
CHEBI ID
CHEBI:15729
(4)
CHEBI:17775
(4)
CHEBI:30769
(4)
CHEBI:15603
(3)
CHEBI:15676
(3)
CHEBI:15891
(3)
CHEBI:15956
(3)
CHEBI:16015
(3)
CHEBI:16235
(3)
CHEBI:16704
(3)
CHEBI:16708
(3)
CHEBI:16737
(3)
CHEBI:16750
(3)
CHEBI:17084
(3)
CHEBI:17368
(3)
CHEBI:17405
(3)
CHEBI:17562
(3)
CHEBI:17568
(3)
CHEBI:17596
(3)
CHEBI:17748
(3)
CHEBI:17821
(3)
CHEBI:17822
(3)
CHEBI:18050
(3)
CHEBI:18211
(3)
CHEBI:21547
(3)
CHEBI:30887
(3)
CHEBI:33508
(3)
CHEBI:35704
(3)
CHEBI:35932
(3)
CHEBI:52217
(2)
Metabolite Name
Citric acid
(3)
Serine
(3)
2-Hydroxycinnamic acid
(2)
3-Hydroxydodecanedioic acid
(2)
3-Hydroxytetradecanedioic acid
(2)
4-Pyridoxic acid
(2)
Allantoin
(2)
Azelaic acid
(2)
Cholesterol
(2)
Citrulline
(2)
Dopamine
(2)
Dopamine 3-O-sulfate
(2)
Glutamine
(2)
Glyceric acid
(2)
Hippuric acid
(2)
Isoleucine
(2)
Kynurenic acid
(2)
Leucine
(2)
Lysine
(2)
Methionine
(2)
N-acetylcitrulline
(2)
Ornithine
(2)
Palmitic acid
(2)
Phenylalanine
(2)
Proline
(2)
Pyroglutamic acid
(2)
Threonine
(2)
Tryptamine
(2)
Tyrosine
(2)
Undecanedioic acid
(2)
IsPrivate
False
(5)
Modelling Approach
Ordinary differential equation model
(4)
Constraint-based model
(1)
Study type
Transcription profiling by array
(27)
RNA-seq of coding RNA
(8)
RNA-seq of non coding RNA
(2)
Human - High-throughput sequencing
(1)
Comparative genomic hybridization by array
(1)
ChIP-seq
(1)
Release Date
2023
(356)
2022
(340)
2021
(323)
2025
(287)
2024
(275)
2020
(236)
2018
(197)
2019
(192)
2017
(137)
2016
(129)
2015
(120)
2014
(115)
2013
(84)
2012
(73)
2011
(64)
2010
(54)
2009
(53)
2026
(41)
2008
(39)
2007
(16)
2006
(7)
2004
(5)
2001
(5)
2002
(4)
2003
(3)
2005
(2)
2000
(2)
1998
(1)
Lab affiliation
Technische Universität München, Dept. Chemistry, Chair of Biotechnology
(2)
Bioanalytical Mass Spectrometry Facility Mark Wainwright Analytical Centre. Room 404B, Lv4 Wallace Wurth Building C27 UNSW Australia www.bmsf.unsw.edu.au Affiliated with: Paleontology, Geobiology and Earth Archives Research Centre (PANGEA) http://www.pangea.unsw.edu.au/
(1)
Cell Biology Department, Harvard Medical School
(1)
Center for Network Systems Biology, Boston University, USA
(1)
Centre for MND Research, Department of Biomedical Sciences, Macquarie University, North Ryde, NSW, 2109 Australia
(1)
Department of Agronomy and Horticulture, Center for Plant Science Innovation, Beadle Center for Biotechnology, University of Nebraska, Lincoln, NE
(1)
Duke University
(1)
Full Professor for Analytical Chemistry Vienna University of Technology Institute of Chemical Technologies and Analytics Getreidemarkt 9/E164 A-1060 Vienna Austria Associate Professor for Biochemistry Medical University of Graz Diagnostic and Research Institute of Pathology Stiftingtalstrasse 24 A-8010 Graz Austria
(1)
Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Systems Biology Permoserstra��e 15, 04318 Leipzig, Germany Phone +49 341 235 4767 nico.jehmlich@ufz.de, www.ufz.de
(1)
Institut Curie, Paris Sciences et Lettres Research University, INSERM U934/ CNRS, UMR3215
(1)
Medical Research Council Protein Phosphorylation and Ubiquitylation Unit School of Life Sciences, University of Dundee, Dundee, Scotland
(1)
Member, Stanford Cancer Institute
(1)
Professor, Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology, Emory University, Atlanta, Georgia, USA
(1)
Research unit "Functional proteomics and metabolic pathways", Institute of Pathology, medical University of Graz, Graz, Austria
(1)
Sunnybrook Research Institute, Toronto, ON, Canada / Department of Biochemistry, University of Toronto, Toronto, ON, Canada / Department of Biochemistry and Molecular Biology, Alberta Children’s Hospital Research Institute, Hotchkiss Brain Institute, University of Calgary, Calgary, AB, Canada / Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON, Canada
(1)
Technische Universität München Lichtenbergstraße 4 85748 Garching Deutschland
(1)
University of Bergen
(1)
University of Pittsburgh Department of psychiatry
(1)
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Microbially Derived P=S and P=Se Bond Formation.
Not available
S-EPMC12042036
|
biostudies-literature
Cite
Human cathepsins K, L, and S: Related proteases, but unique fibrinolytic activity.
Not available
S-EPMC6114084
|
biostudies-literature
Cite
Differential cathepsin responses to inhibitor-induced feedback: E-64 and cystatin C elevate active cathepsin S and suppress active cathepsin L in breast cancer cells.
Not available
S-EPMC5067213
|
biostudies-literature
Cite
Cathepsin S cannibalism of cathepsin K as a mechanism to reduce type I collagen degradation.
Not available
S-EPMC3431690
|
biostudies-literature
Cite
Multiplex zymography captures stage-specific activity profiles of cathepsins K, L, and S in human breast, lung, and cervical cancer.
Not available
S-EPMC3146840
|
biostudies-literature
Cite
S-nitrosation of glutathione transferase p1-1 is controlled by the conformation of a dynamic active site helix.
Not available
S-EPMC3663518
|
biostudies-literature
Cite
NEIL3 Repairs Telomere Damage during S Phase to Secure Chromosome Segregation at Mitosis.
Not available
S-EPMC5606162
|
biostudies-literature
Cite
Specific and off-target immune responses following COVID-19 vaccination with ChAdOx1-S and BNT162b2 vaccines-an exploratory sub-study of the BRACE trial.
Not available
S-EPMC11058726
|
biostudies-literature
Cite
Lysostaphin and BMP-2 co-delivery reduces
S. aureus
infection and regenerates critical-sized segmental bone defects.
Not available
S-EPMC6524983
|
biostudies-literature
Cite
Multiple sites on SARS-CoV-2 spike protein are susceptible to proteolysis by cathepsins B, K, L, S, and V.
Not available
S-EPMC8138523
|
biostudies-literature
Cite
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