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MetabolomicsNew insights into the responses of soil microorganisms to polycyclic aromatic hydrocarbon stress by combining enzyme activity and sequencing analysis with metabolomics
Polycyclic aromatic hydrocarbons (PAHs), some of the most widespread organic contaminants, are highly toxic to soil microorganisms. Whether long-term polluted soils can still respond to the fresh input of pollutants is unknown. In this study, the soil enzyme activity, soil microbial community struct...
2021-02-17 | MTBLS1196 | MetaboLights
TranscriptomicsGenome-wide maps of primary and processed start-sites of transcripts revealed mechanism controlling in vivo stoichiometry of protein complex in bacteria
Here a differential mRNA-sequencing (dRNA-Seq) strategy was employed to distinguish transcriptional start-sites (TSs) and post-transcriptional processed sites (PSs) of transcripts in the cellulolytic mesophile Clostridium cellulolyticum. PS-harboring genes usually  encode heteromultimeric complexes...
ORGANISM(S): [Clostridium] cellulolyticum 
2015-04-27 | E-GEOD-57652 | biostudies-arrayexpress
ProteomicsTMT-based comparative proteomic analysis of the male-sterile mutant ms01 sheds light on sporopollenin production and pollen development in wucai (Brassica campestris L.)
Pear clulsters were treated with 5 µl melatonin after harvesting and the clusters treated with water were used as control. Then the berries were stored at 0 centigrade.
ORGANISM(S): Brassica Napus 
2021-10-15 | PXD029175 |
TranscriptomicsMicroarray analysis of exogenous NAD+-induced transcriptome changes in Arabidopsis thaliana
The goal of the microarray was to investigate the transcriptome changes induced by exogenous NAD+ in the wild-type Col-0 plants. Results showed that exogenous NAD+-induced dramatic transcriptional changes in Arabidopsis. Particularly, a large group of salicylic acid pathway genes including NPR1 and ...
ORGANISM(S): Arabidopsis thaliana 
2016-01-07 | E-GEOD-76568 | biostudies-arrayexpress
UnknownDesign of anti-depressant phosphodiester amino acidic Keap1-Nrf2 protein-protein interaction inhibitors.
Not available
S-EPMC11999321 | biostudies-literature
TranscriptomicsMicroarray analysis of med16, med8, elp2, and wild type (Col-0) infected with the necrotrophic fungal pathogen Sclerotinia sclerotiorum
The goal of the microarray experiment was to identify defense genes that were differentially expressed in the Arabidopsis mutants med16, med8, elp2, wild type in response to infection of the necrotrophic fungal pathogen Sclerotinia sclerotiorum. Results indicated that, compared with the wild type, ...
ORGANISM(S): Arabidopsis thaliana 
2015-01-22 | E-GEOD-65165 | biostudies-arrayexpress
TranscriptomicsMicroarray analysis of elp2 and wild type (Col-0) infected with the necrotrophic fungal pathogen Botrytis cinerea
The goal of the microarray experiment was to identify defense genes that were differentially expressed in the Arabidopsis mutant elp2 and wild type in response to infection of the necrotrophic fungal pathogen Botrytis cinerea. Results indicated that, compared with the wild type, the WRKY33/OCTADECAN...
ORGANISM(S): Arabidopsis thaliana 
2013-07-01 | E-GEOD-48207 | biostudies-arrayexpress
TranscriptomicsA genome-wide functional investigation into the roles of differentially expressed genes and microRNAs, including 24 transcription factor families, in tobacco roots during the drought stress response
Drought stress response is a complex trait regulated at multiple levels. In the past few years, molecular and genomic studies have shown that several drought responsive genes (DRGs) with various functions are induced by drought stresses, and that various transcription factors (TFs) are involved in t...
ORGANISM(S): Nicotiana tabacum 
2013-12-20 | E-GEOD-43058 | biostudies-arrayexpress
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