Ward R R - OmicsDI

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Unknown (4616)
Transcriptomics (123)
Proteomics (67)
Genomics (37)
Metabolomics (16)
Other (3)
Models (2)
Genomic (2)

Organisms

Homo sapiens (91)
Mus musculus (54)
Rattus norvegicus (11)
synthetic construct (9)
Arabidopsis thaliana (5)
Apis mellifera (4)
Drosophila melanogaster (3)
Archaea (3)
seawater metagenome (3)
Bos taurus (2)
Caenorhabditis elegans (2)
Macaca mulatta (2)
Escherichia coli (2)
Alphainfluenzavirus (1)
aquatic metagenome (1)
marine sediment metagenome (1)
Pomacentrus moluccensis (1)
Melopsittacus undulatus (1)
Streptopelia risoria (1)
Caldicellulosiruptor saccharolyticus (1)
Capsicum annuum (1)
Fragilariopsis cylindrus (1)
unidentified (1)
Aedes aegypti (1)
Staphylococcus aureus (1)
Oryctolagus cuniculus (1)
Triticum aestivum (1)
Saccharomyces cerevisiae (1)
Sus scrofa (1)
Plasmodium (1)

Organisms

Homo sapiens (2)
Mus musculus (2)

Repository

biostudies-arrayexpress (126)
pride (62)
EGA (20)
MetaboLights (16)
ENA (12)
geo (5)
MassIVE (3)
BioModels (2)
dbGaP (2)
jPOST (2)

Tissue

Cell culture (10)
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Blood (4)
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Disease free (1)
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Plasmodium falciparum malaria (1)
Pneumonia (1)
Polycystic kidney disease (1)
Type 1 diabetes mellitus (1)

Technology Type

Mass Spectrometry (62)
Shotgun proteomics (35)
Bottom-up proteomics (19)
Mass spectrometry (11)
Illumina 15K (8)
Data-independent acquisition (7)
Data-dependent acquisition (5)
NMR spectroscopy (4)
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SRM/MRM (3)
Affinity purification coupled with mass spectrometry proteomics (2)
Illumina_670k - Illuminus, Affymetrix 6.0, Illumina 1.2M (1)
Affinity proteomics (1)
DiaPASEF (1)
Gel-based experiment (1)
HDMSE (1)
RNA mass spectrometry (1)
SWATH MS (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (5)
Liquid Chromatography MS - positive - hilic (5)
Illumina HiSeq 4000 (4)
Illumina NovaSeq 6000 (3)
5975C Series GC/MSD (Agilent) (3)
Liquid Chromatography MS - positive - reverse phase (3)
Nuclear Magnetic Resonance (NMR) - (3)
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Liquid Chromatography MS - alternating - reverse phase (2)
Zephyr G3 NGS workstation (1)
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NextSeq 500 (1)
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6460 Triple Quadrupole LC/MS (Agilent) (1)
Bruker (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - negative - reverse-phase (1)

Publication Date

2025 (18)
2010 (17)
2011 (16)
2024 (15)
2014 (15)
2022 (14)
2018 (13)
2020 (12)
2015 (12)
2016 (11)
2013 (11)
2008 (10)
2026 (9)
2021 (9)
2012 (6)
2009 (6)
2019 (5)
2007 (4)
2023 (4)
2017 (3)
2006 (2)
2005 (2)
2004 (1)
2003 (1)

CHEBI ID

CHEBI:15428 (6)
CHEBI:16449 (5)
CHEBI:18186 (5)
CHEBI:28044 (5)
CHEBI:15366 (4)
CHEBI:15741 (4)
CHEBI:16335 (4)
CHEBI:17234 (4)
CHEBI:17368 (4)
CHEBI:17822 (4)
CHEBI:18012 (4)
CHEBI:22653 (4)
CHEBI:24898 (4)
CHEBI:25094 (4)
CHEBI:26271 (4)
CHEBI:27266 (4)
CHEBI:30769 (4)
CHEBI:78320 (4)
CHEBI:7916 (4)
CHEBI:14336 (3)
CHEBI:15756 (3)
CHEBI:16199 (3)
CHEBI:16414 (3)
CHEBI:16737 (3)
CHEBI:16797 (3)
CHEBI:16811 (3)
CHEBI:16865 (3)
CHEBI:17268 (3)
CHEBI:17351 (3)
CHEBI:17568 (3)

Metabolite Name

Adenosine (4)
Proline (4)
Alanine (3)
Asparagine (3)
Glutamine (3)
Glycine (3)
Phenylalanine (3)
Serine (3)
1-Methylnicotinamide (2)
AMP (2)
Acetate (2)
Ascorbic acid (2)
Campesterol (2)
Choline (2)
Citrate (2)
Creatine (2)
Creatinine (2)
Cytosine (2)
Fumarate (2)
Glucose (2)
Glutathione (2)
Glyceric acid (2)
Glycerol (2)
Histidine (2)
Hypotaurine (2)
Hypoxanthine (2)
Indole-3-carboxaldehyde (2)
Inosine (2)
Isoleucine (2)
Isovalerylcarnitine (2)

IsPrivate

False (2)

First Public Date

2020 (3)
2022 (2)
2026 (1)
2025 (1)
2024 (1)
2023 (1)
2019 (1)
2017 (1)
2015 (1)

Modelling Approach

Ordinary differential equation model (2)

Study type

Transcription profiling by array (88)
RNA-seq of coding RNA (12)
Other (9)
Comparative genomic hybridization by array (4)
ChIP-seq (4)
Animal - High-throughput sequencing (2)
ChIP-chip by tiling array (1)
ChIP-chip by array (1)
Genotyping by array (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (576)
2022 (576)
2021 (515)
2023 (495)
2024 (458)
2020 (352)
2019 (273)
2018 (246)
2017 (190)
2016 (174)
2015 (172)
2014 (155)
2012 (97)
2026 (92)
2013 (90)
2011 (77)
2010 (64)
2009 (39)
2008 (33)
2007 (16)
2006 (11)
2005 (9)
2004 (8)
2003 (8)
2000 (6)
2001 (5)
2002 (4)
1997 (1)

Lab affiliation

Florida State University (4)
Lab Head, Medical Mycology, Maynooth Univeristy (2)
1Integrated and Urban Plant Pathology Laboratory, University of Liège, Gembloux Agro-Bio Tech, 2 Passage des Déportés 5030 Gembloux, Belgium (1)
Amgen Inc. (1)
Assistant Professor of Neurosurgery Department of Neurosurgery Houston Methodist Research Institute Weill Cornell Medical College (1)
BioArCh, Department of Archaeology, University of York (1)
Center for Alzheimer's and Related Dementias (CARD), NIA and NINDS, NIH, Bethesda, Maryland, USA. (1)
Center for Alzheimer’s Disease and Related Dementias (CARD) National Institute on Aging (NIA) National Institutes of Health (NIH) (1)
Centre for Genomic Regulation (CRG), the Barcelona Institute of Science and Technology, Carrer Dr. Aiguader 88, Barcelona 08003, Spain. (1)
Centre for Medicines Discovery & Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Oxford, UK (1)
Centre for Proteomic Research, Biological Sciences, University of Southampton (1)
Chief Scientific Officer, Pelago Bioscience AB (1)
Chief Scientific Offiser, Pelago Bioscience AB (1)
Department of Analytical Chemistry and CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China (1)
Department of Biochemistry, The University of Western Ontario, London, Ontario, Canada (1)
Department of Biochemistry, The University of Western Ontario, London, Ontario, Canada. Department of Chemistry, The University of Western Ontario, London, Ontario, Canada. (1)
Department of Biology, Maynooth University, Maynooth, Co. Kildare, Ireland. (1)
Department of Chemical Engineering, University of Texas at Austin, Austin, TX, USA. (1)
Department of Chemical Engineering, University of Texas at Austin, Austin, Texas, USA (1)
Department of Chemistry, Columbia University, New York, NY 10027 (1)
Department of Chemistry, Imperial College London, UK (1)
Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, United States (1)
Department of Molecular & Integrative Physiology, Department of Internal Medicine, Division of Gastroenterology and Hepatology, University of Michigan, Ann Arbor, MI 48109, USA (1)
Department of Molecular Biology, Princeton University, US (1)
Department of Molecular Genetics and Cell Biology, The University of Chicago, Chicago IL, USA (1)
Department of Molecular Medicine, The Scripps Research Institute, La Jolla, California 92037 United States (1)
Department of Orthopaedic Surgery School of Medicine University of California San Diego 9500 Gilman Drive MC0863 La Jolla, CA, USA (1)
Deputy Head (Research), Department of Biochemistry and Molecular Biology Head Immunoproteomics Laboratory Infection and Immunity Program Room 214, level 2, 15 Innovation Walk Monash Biomedicine Discovery Institute Monash University, Clayton Campus Clayton 3800 Victoria Australia (1)
Division of Pathology Laboratories, Institute of Genetics and Molecular Medicine, University of Edinburgh (1)
Dr. Andreas Otto Institute for Microbiology Department of Microbial Proteomics Ernst-Moritz-Arndt-University Greifswald F.-L.-Jahn-Str. 15 17489 Greifswald phone: +49 3834 4205920 fax: +49 3834 4205902 (1)

Tags

xref:PubMed:41011433 (1)
xref:PubMed:32057994 (1)
xref:PubMed:26121046 (1)
xref:PubMed:31726115 (1)
xref:EuropePMC:PMC7977308 (1)

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Norovirus VPg Binds RNA through a Conserved N-Terminal K/R Basic Patch.

Not available

S-EPMC8310136 | biostudies-literature

"There Is a Cat on Our Ward": Inpatient and Staff Member Attitudes toward and Experiences with Cats in a Psychiatric Ward.

Not available

S-EPMC6747524 | biostudies-literature

Regulation of nitrous oxide production in low oxygen waters off the coast of Peru

This SuperSeries is composed of the SubSeries listed below. [SUBMITTER_CITATION]: Frey, C., Bange, H. W., Achterberg, E. P., Jayakumar, A., Löscher, C. R., Arévalo-Martínez, D. L., León-Palmero, E., Sun, M., Sun, X., Xie, R. C., Oleynik, S., and Ward, B. B.: Regulation of nitrous oxide production in...

ORGANISM(S): synthetic construct seawater metagenome Archaea

2020-01-07 | GSE142806 | GEO

The substrate specificity, enantioselectivity and structure of the (R)-selective amine : pyruvate transaminase from Nectria haematococca.

Not available

S-EPMC4255305 | biostudies-literature

The MC1R r allele does not increase melanoma risk in MITF E318K carriers.

Not available

S-EPMC10230961 | biostudies-literature

Cub Ward: The Real Not Real Ward - a student nurse led simulation ward.

Not available

S-EPMC9884185 | biostudies-literature

Drug resistant MTB strains from Moldova