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UnknownIdentification of biological pathway and process regulators using sparse partial least squares and triple-gene mutual interaction.
Not available
S-EPMC8222328 | biostudies-literature
UnknownSSGA and MSGA: two seed-growing algorithms for constructing collaborative subnetworks.
Not available
S-EPMC5431152 | biostudies-literature
UnknownBottom-up GGM algorithm for constructing multilayered hierarchical gene regulatory networks that govern biological pathways or processes.
Not available
S-EPMC4797117 | biostudies-literature
UnknownTF-finder: a software package for identifying transcription factors involved in biological processes using microarray data and existing knowledge base.
Not available
S-EPMC2930629 | biostudies-literature
UnknownMicroRNA expression profiles from eggs of different qualities associated with post-ovulatory ageing in rainbow trout (Oncorhynchus mykiss).
Not available
S-EPMC4374207 | biostudies-literature
TranscriptomicsWhole genome ChIP/chip tiling of human ES cells for H3K4me3 and H3K27me3
Chromatin immunoprecipitation was performed using monoclonal antibodiesd. DNA was amplified, fluorescently labeled and hybridized to a series of 38 arrays containing a total of 14.6 million 50-mer oligonucleotides Keywords: ChIP-chip hES whole genome Chromatin immunoprecipitated DNA from H3K4me
ORGANISM(S): Homo sapiens 
2007-09-14 | E-GEOD-8463 | biostudies-arrayexpress
TranscriptomicsRetionic acid gene expression time series in human embryonic stem cells
Retinoic acid RA time course experiment: H1 cells(WiCell Research Institute, WA01, Passage40) maintained in TeSR1 were treated with 1uM retinoic acid (RA) in a detailed time course:day0,day0.5,day1,day1.5,day2,day3, day4 and day5 . Total RNA was prepared by usage of the Qiagen RNA extraction kit. m...
ORGANISM(S): Homo sapiens 
2007-09-13 | E-GEOD-8439 | biostudies-arrayexpress
TranscriptomicsPtr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa
Laccases were proposed to catalyze the oxidative polymerization of monolignols. We identified 49 laccase gene models in Populus trichocarpa, of which 29 were predicted to be targets of ptr-miR397a. We overexpressed Ptr-MIR397a in transgenic P. trichocarpa. In each of all 9 transgenic lines tested, 1...
ORGANISM(S): Populus trichocarpa 
2014-01-17 | E-GEOD-54153 | biostudies-arrayexpress
UnknownThe flying spider-monkey tree fern genome provides insights into fern evolution and arborescence.
Not available
S-EPMC9122828 | biostudies-literature
ProteomicsIsolation and Comprehensive Analysis of Cochlear Tissue-derived Small Extracellular Vesicles
Label-free quantitative proteomics analysis of CDsEVs, with the same amount of protein of cochlear tissues used as the control
ORGANISM(S): Mus Musculus 
2024-10-04 | PXD056591 |
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