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TranscriptomicsLong Neural Genes Harbor Recurrent DNA Break Clusters in Neural Stem/Progenitor Cells
Repair of DNA double-strand breaks (DSBs) by non-homologous end-joining is critical for neural development, and brain cells frequently contain somatic genomic variations that might involve DSB intermediates. We now use an unbiased, high-throughput approach to identify genomic regions harboring recur...
ORGANISM(S): Mus musculus 
2016-02-15 | E-GEOD-74356 | biostudies-arrayexpress
TranscriptomicsTime-course gene expression profiles of a Saccharomyces cerevisiae wild type and long-lived sch9-delta mutant
The SCH9 null strain has smaller cell size, grows at a slower rate and survives three times longer than wide-type yeast. This study aims to dissect the mechanisms that lead to the yeast life span extension of sch9-delta. We measure gene expression profiles of the S. cerevisiae wild type and the lon...
ORGANISM(S): Saccharomyces cerevisiae 
2009-12-24 | E-GEOD-14227 | biostudies-arrayexpress
ProteomicsEffects of arbuscular mycorrhizal fungi on Pteris cretica L var. nervosa fronds antimony enrichment, morphology and proteome changes during antimony phytoremediation
Pteris cretica L var. nervosa is one of the dominent fern species at antimony mining area where arbuscular mycorrhizal fungi can be found as a symbiosis. The effect of AMF on fern exposed to long-term excessive Sb was pooly understood. The project applied this fern co-cultivting with or withour AMF ...
ORGANISM(S): Pteris cretica var. nervosa 
2024-01-19 | PXD012678 | Pride
Arbuscular mycorrhizal fungi Antimony phytoremediation Pteris cretica l var. nervosa Long-term exposure Fronds proteomic identification 
TranscriptomicsMapping of INS promoter interactions reveals its role in long-range regulation of SYT8 transcription
Insulin (INS) synthesis and secretion from pancreatic M-NM-2 cells are tightly regulated; their deregulation causes diabetes. Here we map INS-associated loci in human pancreatic islets by 4C and 3C techniques and show that the INS gene physically interacts with the SYT8 gene, located over 300 kb ...
ORGANISM(S): Homo sapiens 
2011-02-22 | E-GEOD-25862 | biostudies-arrayexpress
TranscriptomicsExpression data from tumor tissue-derived long-term-cultured breast cancer stem cells
Here we established two tumor tissue-derived long-term-cultured breast cancer stem cells (BCSC). RNA extraction and microarray analysis total RNA from BCSC treating with G1, G15, or control (Ctrl) for 48 hr were extracted using Trizol Reagent. Important significant differences of cDNA genes were ide...
ORGANISM(S): Homo sapiens 
2017-09-04 | E-MTAB-5057 | biostudies-arrayexpress
UnknownEfficacy and safety of Jia Wei Bushen Yiqi formulas as an adjunct therapy to systemic glucocorticoids on acute exacerbation of COPD: study protocol for a randomized, double-blinded, multi-center, placebo-controlled clinical trial.
Not available
S-EPMC7468179 | biostudies-literature
TranscriptomicsGene expression profiles in black soybean sprouts: 0.5 cm long vs 5 cm long
To explore the mechanism underlying antioxidant activity of extracts from black soybean sprouts 0.5 cm long, Agilent-016772 G. max (Soybean) Oligo Microarray 4x44K was used to compare mRNA expression between the black soybean sprouts 0.5 cm long (n=4) and the black soybean sprouts 5 cm long (n=4). G...
ORGANISM(S): Glycine max 
2012-08-09 | E-GEOD-40002 | biostudies-arrayexpress
TranscriptomicsA Long Noncoding RNA Acts as a Tumor Suppressor in Esophageal Squamous Cell Carcinoma
Many long noncoding transcripts are involved in cancer progression. Here, we utilized high-throughput microarray to compare the transcriptome alterations between the KYSE30 cells overexpressing an empty vector and Epist, thus identified 95 and 99 down-regulated and up-regulated genes, respectively. ...
ORGANISM(S): Homo sapiens 
2015-01-09 | E-GEOD-64792 | biostudies-arrayexpress
TranscriptomicsGenome-wide analysis of microRNAs and their targets involving in leaf senescence of rice
Enhancing grain production of rice (Oryza sativa L.) is a top priority in ensuring food security for human being. One approach to increase yield is to delay leaf senescence and to extend the available time for photosynthesis. microRNAs (miRNAs) are key regulators for aging and cellular senescence in...
ORGANISM(S): Oryza sativa 
2015-01-01 | E-GEOD-62200 | biostudies-arrayexpress
UnknownElectronic Resonant Stimulated Raman Scattering Micro-Spectroscopy.
Not available
S-EPMC6425473 | biostudies-literature
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