Wei Wei W - OmicsDI

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Unknown (14825)
Transcriptomics (912)
Proteomics (814)
Genomics (180)
Metabolomics (75)
Multiomics (10)
Other (4)
Models (3)
Genomic (1)

Organisms

Homo sapiens (756)
Mus musculus (375)
Rattus norvegicus (44)
Arabidopsis thaliana (39)
Caenorhabditis elegans (36)
Saccharomyces cerevisiae (22)
Streptomyces coelicolor (17)
Drosophila melanogaster (17)
Oryza sativa (14)
Glycine max (11)
Zea mays (8)
Triticum aestivum (8)
Staphylococcus aureus (8)
Oryza sativa Japonica Group (7)
Ovis aries (6)
Tetrahymena thermophila (5)
Macaca mulatta (5)
Bombyx mori (5)
Moraxella catarrhalis (4)
Bacillus subtilis subsp. subtilis str. 168 (4)
Brassica napus (4)
Campylobacter jejuni (4)
Sus scrofa (4)
Danio rerio (4)
Dreissena polymorpha (3)
Gossypium hirsutum (3)
Yersinia pestis (3)
Oryza sativa Indica Group (3)
Pseudomonas aeruginosa PAO1 (3)
Cryptococcus neoformans (3)

Repository

biostudies-arrayexpress (1043)
iProX (405)
pride (280)
MetaboLights (70)
PeptideAtlas (70)
EGA (50)
MassIVE (42)
jPOST (13)
GNPS (5)
GPMDB (4)
BioModels (3)
PAXDB (2)
dbGaP (1)
PanoramaPublic (1)

Tissue

Cell culture (75)
Liver (44)
Epithelial cell (28)
Brain (26)
Liver (14)
Leaf (10)
Plant cell (10)
Whole body (10)
Permanent cell line cell (9)
Stem cell (8)
Blood plasma (7)
Testis (7)
Others (6)
Macrophage (6)
Blood serum (5)
B cell (4)
Colon (4)
Heart (4)
Blood cell (3)
Cell suspension culture (3)
Embryo (3)
Flower (3)
HeLa cell (3)
Hepatocyte (3)
Lung (3)
Neutrophil (3)
Root (3)
Male Reproductive System (2)
Plasma Non-glyco (2)
Urine (1)

Disease

Prostate adenocarcinoma (10)
Colon cancer (7)
Breast cancer (6)
Disease free (6)
Alzheimer's disease (5)
Not Available (4)
Acute leukemia (3)
Brain cancer (3)
Normal (2)
Abnormality of prenatal development or birth (2)
Influenza (2)
Parkinson's disease (2)
Renal cell carcinoma (2)
Temporal lobe epilepsy (2)
Adenocaricinoma (1)
Primary acute lymphoblastic leukemia (1)
Amyotrophic lateral sclerosis (1)
Normotensive (1)
Kaposi's sarcoma (1)
AIDS-KS, HIV+, nodular (late) stage (1)
SS2-infected (1)
Psoriasis (1)
Papillary thyroid carcinoma (1)
Invasive ductal carcinoma (1)
Alcohol (1)
Brain glioblastoma multiforme (1)
Brain ischemia (1)
Buruli ulcer disease (1)
Cardiovascular system disease (1)
Cervix carcinoma (1)

Technology Type

Mass Spectrometry (280)
Shotgun proteomics (162)
Mass spectrometry (52)
Bottom-up proteomics (34)
Gel-based experiment (27)
Affinity purification coupled with mass spectrometry proteomics (23)
Data-dependent acquisition (22)
Top-down proteomics (13)
Mass spectrometry assay (12)
SWATH MS (7)
NMR spectroscopy (6)
Chemical cross-linking coupled with mass spectrometry proteomics (6)
Data-independent acquisition (6)
SRM/MRM (4)
Illumina HiSeq 2000 (2)
MSE (2)
Mass spectrometry imaging (2)
Illumina HiSeq 2500, ILLUMINA (1)
ILLUMINA, Illumina HiSeq 2500 (1)
AB SOLiD System 3.0 (1)
All-ion fragmentation (1)
Proteogenomics (1)
RNA mass spectrometry (1)

Instrument Platform

Illumina NovaSeq 6000 (29)
Illumina HiSeq 2000 (17)
Illumina HiSeq 2500 (13)
NextSeq 500 (8)
Q Exactive HF (7)
Illumina HiSeq 3000 (5)
MA900, Sony (2)
10x Chromium Controller (2)
RiboZero (2)
Trizol (Invitrogen); FastPrep (MP Biochemicals) (2)
DASGIP bioreactors (2)
Ion Torrent Proton (2)
HiSeq X Ten (2)
Illumina HiSeq 4000 (2)
Agilent 2100 bioanalyzer (1)
NanoDrop ND-1000 (1)
Affymetrix Genechip Command Console software (1)
Trizol Reagent (1)
Covaris E220evolution (1)
AB SOLiD 4 System (1)
ScanArray 4000XL [PerkinElmer] (1)
GenePix 4000B [Axon Instruments] (1)
Illumina Genome Analyzer II (1)
Scanning hardware (1)
Illumina NovaSeq X (1)
Illumina HiSeq X (1)
DNBSEQ-T7 (1)
MinION (1)
LTQ FT (1)
MaXis (1)

Publication Date

2014 (179)
2012 (140)
2013 (139)
2011 (136)
2021 (121)
2015 (112)
2022 (112)
2010 (98)
2016 (90)
2020 (82)
2024 (77)
2025 (77)
2023 (67)
2019 (52)
2008 (50)
2026 (40)
2009 (36)
2017 (35)
2018 (30)
2007 (18)
2006 (7)
2005 (5)
2004 (4)
2003 (1)
2002 (1)
2001 (1)

UNIPROT ID/AC

1433B_SOYBN (2)
1433D_SOYBN (2)
6DCS_SOYBN (2)
A1YZE0_SOYBN (2)
A5I866_SOYBN (2)
A5JUQ4_SOYBN (2)
A5JVZ7_SOYBN (2)
A5Z2K3_SOYBN (2)
A7BIC9_SOYBN (2)
A7X657_SOYBN (2)
A7XZJ7_SOYBN (2)
A9CPA7_SOYBN (2)
A9QNE4_SOYBN (2)
ACCD_SOYBN (2)
ACT3_SOYBN (2)
AKR1_SOYBN (2)
AMYB_SOYBN (2)
AOX3_SOYBN (2)
ATPB_SOYBN (2)
ATPE_SOYBN (2)
ATPF_SOYBN (2)
B0M195_SOYBN (2)
B0M196_SOYBN (2)
B0M1A0_SOYBN (2)
B0M1A4_SOYBN (2)
B0M1A6_SOYBN (2)
B0M1A9_SOYBN (2)
B0M1B1_SOYBN (2)
B1ACD3_SOYBN (2)
B1ACD5_SOYBN (2)

ENSEMBL ID

ENSG00000170477 (10)
ENSG00000247315 (5)
ENSG00000147251 (4)
ENSG00000229353 (3)
ENSG00000214897 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:17368 (25)
CHEBI:30769 (24)
CHEBI:17568 (21)
CHEBI:17895 (21)
CHEBI:17295 (21)
CHEBI:16015 (20)
CHEBI:15741 (19)
CHEBI:15891 (19)
CHEBI:16704 (19)
CHEBI:15428 (18)
CHEBI:17154 (18)
CHEBI:18012 (18)
CHEBI:32816 (18)
CHEBI:15756 (18)
CHEBI:17533 (17)
CHEBI:30746 (17)
CHEBI:16335 (17)
CHEBI:17203 (17)
CHEBI:30915 (17)
CHEBI:16919 (17)
CHEBI:16865 (16)
CHEBI:16467 (16)
CHEBI:18050 (16)
CHEBI:16359 (16)
CHEBI:17053 (16)
CHEBI:16755 (15)
CHEBI:18257 (15)
CHEBI:16708 (15)
CHEBI:28842 (15)
CHEBI:16958 (15)

Metabolite Name

Hypoxanthine (19)
L-Tyrosine (18)
L-Proline (15)
Taurine (14)
Xanthine (14)
L-Phenylalanine (14)
Uracil (13)
L-Histidine (13)
Adenosine (13)
Uridine (13)
Citric acid (12)
Glycine (11)
L-Arginine (11)
Stearic acid (11)
Guanine (11)
L-Glutamine (11)
L-Serine (11)
Guanosine (11)
L-Leucine (11)
L-Methionine (11)
Nicotinic acid (10)
Ornithine (10)
Benzoic acid (10)
Suberic acid (10)
L-Glutamate (10)
Adenine (10)
Thymidine (10)
Creatinine (10)
L-Isoleucine (10)
L-Alanine (9)

IsPrivate

False (3)

Model Flag

Non Kinetic (1)

Modelling Approach

Ordinary differential equation model (2)
Constraint-based model (1)

Modification

2x(15)N labeled L-lysine (1)
4-tetrahydrothiazine-3-carboxylic acid (1)
4x(15)N labeled L-arginine (1)
Not available (1)

Study type

Transcription profiling by array (560)
RNA-seq of coding RNA (171)
ChIP-seq (107)
RNA-seq of non coding RNA (48)
Comparative genomic hybridization by array (26)
Methylation profiling by high throughput sequencing (23)
Methylation profiling by array (20)
RNA-seq of coding RNA from single cells (16)
Transcription profiling by RT-PCR (11)
ChIP-chip by tiling array (10)
Other (10)
Unknown experiment type (5)
Transcription profiling by tiling array (5)
Genotyping by array (5)
Animal - High-throughput sequencing (4)
ATAC-seq (4)
MicroRNA profiling by array (4)
Transcription profiling by SAGE (2)
Plant - High-throughput sequencing (2)
High-throughput sequencing (2)
ChIP-chip by array (2)
Transcription profiling by MPSS (1)
MNase-seq (1)
MeDIP-seq (1)
Cell line - One-color microarray (1)
Proteomic profiling by array (1)
RNA-seq of total RNA (1)

Release Date

2025 (2334)
2022 (2017)
2023 (1927)
2024 (1873)
2021 (1519)
2020 (1127)
2019 (853)
2018 (686)
2017 (576)
2016 (541)
2015 (452)
2014 (430)
2026 (335)
2013 (316)
2012 (269)
2011 (221)
2010 (153)
2008 (83)
2009 (73)
2007 (30)
2006 (19)
2005 (13)
2004 (9)
2003 (6)
2002 (2)
2001 (2)
2000 (1)

Lab affiliation

National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (10)
National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, 5 Dong Dan San Tiao, Dongcheng District, Beijing 100005, China. (4)
The Second Hospital of Dalian Medical University (4)
Cedars-Sinai Medical Center (3)
Departments of Surgery and Biomedical Sciences Cedars-Sinai Medical Center Los Angeles, CA 90048 (3)
Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, National Key Laboratory of Medical Molecular Biology & Department of Immunology, No 5 Dongdan Santiao, Dongcheng district, Beijing 100005, China (3)
Shandong Normal University (3)
Affiliation of Qiutao Xu: State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Agriculture, Guangxi University, Nanning 530004, China (2)
Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Harbin 150040, China (2)
Department of Biochemistry and Department of Metabolic Medicine of the Fourth Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310058, China (2)
Department of Dental Implant Center, Beijing Stomatological Hospital, School of Stomatology, Capital Medical University, Beijing, China (2)
Department of Pathology and Cell Biology and Institute for Cancer Genetics Herbert Irving Comprehensive Cancer Vagelos College of Physicians & Surgeons Columbia University (2)
Department of Stomatology, Nanfang Hospital, Southern Medical University, Guangzhou, China, 510515 (2)
Institute of Animal Sciences, Chinese Academy of Agricultural Sciences (2)
Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, National Key Laboratory of Medical Molecular Biology & Department of Immunology (2)
Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, National Key Laboratory of Medical Molecular Biology & Department of Immunology, No 5 Dongdan Santiao, Dongcheng district, Beijing 100005, China. (2)
Institute of Basic Medical Sciences, School of Basic Medicine, Peking Union Medical College; No. 5 Dongdansantiao, Dongcheng District, Beijing 100005, China (2)
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China (2)
Penn State College of Medicine, Hershey, PA, USA (2)
School of Engineering, Westlake University (2)
School of Medicine, College of Medicine, Fu Jen Catholic University, New Taipei, Taiwan (2)
School of Medicine, Fu Jen Catholic University, New Taipei, Taiwan (2)
Shenzhen People’s Hospital (2)
State Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (2)
State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Engineering Research Center for Protein Drugs, National Center for Protein Sciences, Beijing Institute of Radiation Medicine, Beijing 102206, China (2)
Sun Yat-sen University (2)
Tianjin Medical University (2)
Tianjin Medical University General Hospital (2)
Zhejiang University (2)
1 Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands 2 Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)

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Global Mapping of Histone H3 K4 and K27 Trimethylation: Lineage Fate Determination of Differentiating CD4+ T Cells

Multipotential naïve CD4+ T cells differentiate into distinct lineages including Th1, Th2, Th17, and inducible T regulatory (iTreg) cells. The remarkable diversity of CD4+ T cells begs the question whether the observed changes reflect terminal differentiation with heritable epigenetic modifications ...

ORGANISM(S): Mus musculus

2009-01-21 | E-GEOD-14254 | biostudies-arrayexpress

A Systems Pharmacology Approach for Identifying the Multiple Mechanisms of Action of the Wei Pi Xiao Decoction for the Treatment of Gastric Precancerous Lesions.

Not available

S-EPMC6378068 | biostudies-literature

Transcriptome Analysis Reveals Long Intergenic Non-Coding RNAs Contributed to Intramuscular Fat Content Differences between Yorkshire and Wei Pigs.

Not available

S-EPMC7084294 | biostudies-literature

Validation of the Anticolitis Efficacy of the Jian-Wei-Yu-Yang Formula.

Not available

S-EPMC9451982 | biostudies-literature

Clinical efficacy of weight loss herbal intervention therapy and lifestyle modifications on obesity and its association with distinct gut microbiome: A randomized double-blind phase 2 study.

Not available

S-EPMC10073537 | biostudies-literature

Identification and characterization of extrachromosomal circular DNA in Wei and Large White pigs by high-throughput sequencing.

Not available

S-EPMC9935582 | biostudies-literature

Aberrant chromatin acetylation in MLL-AF9 leukemia mediates the response to HDAC inhibition (microarray)

We investigated the response of acute myeloid cells (AML) expressing MLL-AF9 fusion gene to the pan-HDACi panobinostat (LBH589), and found that low conentrations of panobinostat lead to MLL-AF9 cell toxicity and rapid changes in gene expression. Human hematopoietic stem/progenitor cells (HSPC) expre...

ORGANISM(S): Homo sapiens

2015-03-01 | E-GEOD-54218 | biostudies-arrayexpress

Efficacy and safety of Jia Wei Bushen Yiqi formulas as an adjunct therapy to systemic glucocorticoids on acute exacerbation of COPD: study protocol for a randomized, double-blinded, multi-center, placebo-controlled clinical trial.

Not available

S-EPMC7468179 | biostudies-literature

Complete assembly of the chloroplast genome of Amorphophallus coaetaneus S. Y. Liu & S. J. Wei 1986 (Araceae) from southwestern China.

Not available

S-EPMC10519266 | biostudies-literature

Mechanistic evaluation of Jiu Wei Qing Zhi Gao in non-alcoholic fatty liver disease: insights from network Pharmacology and experimental validation.

Not available

S-EPMC11992867 | biostudies-literature