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TranscriptomicsThe PII protein GlnK is a pleiotropic regulator for morphological differentiation and secondary metabolism in Streptomyces coelicolor
This SuperSeries is composed of the following subset Series: GSE30569: Metabolic switching in Streptomyces coelicolor wild type, time series under glutamate depletion condition GSE30570: Metabolic switching in Streptomyces coelicolor time series under glutamate depletion of mutant SCglnK-3. Refer to...
ORGANISM(S): Streptomyces coelicolor 
2011-12-31 | E-GEOD-30571 | biostudies-arrayexpress
TranscriptomicsMetabolic switches and adaptations deduced from the proteomes of Streptomyces coelicolor wild type and phoP mutant grown in batch culture
Bacteria in the genus Streptomyces are soil dwelling oligotrophs and important producers of secondary metabolites. Previously we showed that global mRNA expression was subject to a series of metabolic and regulatory switches during the life time of a fermentor batch culture of S. coelicolor M145. He...
ORGANISM(S): Streptomyces coelicolor 
2011-12-31 | E-GEOD-31068 | biostudies-arrayexpress
TranscriptomicsMetabolic switching of the PII protein GlnK in Streptomyces coelicolor
GlnK is an important nitrogen sensor protein in Streptomyces coelicolor. Deletion of glnK results in a medium-dependent failure of aerial mycelium and spore formation and loss of antibiotic production. Thus, GlnK is not only a regulator of nitrogen metabolism but also of morphological differentiatio...
ORGANISM(S): Streptomyces coelicolor 
2011-12-31 | E-GEOD-30570 | biostudies-arrayexpress
TranscriptomicsMetabolic switching in Streptomyces coelicolor wild type, time series under glutamate depletion condition
During the lifetime of a fermenter culture, the soil bacterium S. coelicolor undergoes a major metabolic switch from exponential growth to antibiotic production. We have studied gene expression patterns during this switch, using a specifically designed Affymetrix GeneChip and a high-resolution time-...
ORGANISM(S): Streptomyces coelicolor 
2011-12-31 | E-GEOD-30569 | biostudies-arrayexpress
ModelsKumelj2019 - Streptomyces coelicolor (iKS1317)
FROG and miniFROG reports compiled for iKS1317, a reconstructed genome-scale metabolic model (GEM) for Streptomyces coelicolor. The model reconstruction is available in the Supporting Information of Kumelj et al, 2019 cited here.
2024-10-15 | BIOMD0000001087 | BioModels
FROG 
TranscriptomicsMetabolic switching in Streptomyces coelicolor Timeseries 1
Background: During the lifetime of a fermenter culture, the soil bacterium S. coelicolor undergoes a major metabolic switch from exponential growth to antibiotic production. We have studied gene expression patterns during this switch, using a specifically designed Affymetrix genechip and a high-reso...
ORGANISM(S): Streptomyces coelicolor 
2010-05-18 | E-GEOD-18489 | biostudies-arrayexpress
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