Sort   by:  
 Page size 
TranscriptomicsMixed Culture Gene Expression of E. coli and Pseudomonas aeruginosa grown on defined media with N-acetyl glucosamine
Transcriptional profiles of Escherichia coli MG1655 in mixed culture with Pseudomonas aeruginosa PAO1 showed a number of E. coli genes to be upregulated including purA-F and other genes associated with purine synthesis. In contrast, genes associated with pyrimidine synthesis were unaffected. Competi...
ORGANISM(S): Escherichia coli str. K-12 substr. MG1655 
2011-11-29 | E-GEOD-26932 | biostudies-arrayexpress
TranscriptomicsMixed Culture Gene Expression of E. coli and Pseudomonas aeruginosa
Transcriptional profiles of Escherichia coli MG1655 in mixed culture with Pseudomonas aeruginosa PAO1 showed a number of E. coli genes to be upregulated including purA-F and other genes associated with purine synthesis. In contrast, genes associated with pyrimidine synthesis were unaffected. Competi...
ORGANISM(S): Escherichia coli 
2011-11-09 | E-GEOD-26931 | biostudies-arrayexpress
TranscriptomicsMicroarray analysis of P. aeruginosa PAO1 expression PA5060 (phaF) on pJN105
The Pseudomonas aeruginosa PAO1 gene phaF (PA5060) is a transcriptional regulator in the closely related pseudomonad P. putida. phaF is expressed at higher levels in P. aeruginosa clinical isolates from the cystic fibrosis respiratory tract. To determine the role of phaF in regulating P. aeruginosa ...
ORGANISM(S): Pseudomonas aeruginosa 
2013-06-21 | E-GEOD-47173 | biostudies-arrayexpress
no omics definedTranscription profiling of copper-stressed Pseudomonas aeruginosa
Anthropogenic pollution has increased the levels of heavy metals in the environment. Bacterial populations continue to thrive in highly polluted environments and bacteria must have mechanisms to counter heavy metal stress. We chose to examine the response of the environmentally-relevant organism P...
ORGANISM(S): Pseudomonas aeruginosa 
2007-10-24 | E-GEOD-4152 | biostudies-arrayexpress
TranscriptomicsTranscriptional profiling of P. aeruginosa isolated from 3 individuals with cystic fibrosis over time
Pseudomonas aeruginosa chronically colonizes the lungs of individuals with CF, where it reaches high cell densities and produces a battery of virulence factors. Upon infection, a single strain of P. aeruginosa can colonize an individual’s lungs throughout his or her lifetime. To understand the evo...
ORGANISM(S): Pseudomonas aeruginosa 
2010-06-08 | E-GEOD-21966 | biostudies-arrayexpress
ProteomicsUsing conserved protein to mRNA ratios across kingdoms to enhance microbial functional predictions
Understanding the biology of native microbial communities is hindered by the lack of robust functional data for the microbes within these communities. Quantifying mRNA levels via transcriptomics to infer function has proven successful in these communities. However, this requires the ability to accur...
ORGANISM(S): Sulfolobus Islandicus M.16.4 (ncbitaxon:426118) Staphylococcus Aureus Subsp. Aureus Usa300 (ncbitaxon:367830) Aggregatibacter Actinomycetemcomitans (ncbitaxon:714) Aggregatibacter Actinomycetemcomitans Y4 (ncbitaxon:1035194) Streptococcus Gordonii Str. Challis Substr. Ch1 (ncbitaxon:467705) Porphyromonas Gingivalis Atcc 33277 (ncbitaxon:431947) 
MSV000095802 | MassIVE
ProteomicsProteomics of Pseudomonas aeruginosa PAO1 and PA14
Recent studies have shown that the concentrations of proteins expressed from orthologous genes are often conserved across organisms, and to a greater extent than the abundances of the corresponding mRNAs. However, such studies have not distinguished between evolutionary (e.g., sequence divergence) a...
ORGANISM(S): Pseudomonas Aeruginosa Pa14 (ncbitaxon:652611) Pseudomonas Aeruginosa Pao1 (ncbitaxon:208964) 
2018-08-29 | MSV000082863 | MassIVE
Sort   by:  
 Page size