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TranscriptomicsCYP19A1 mediated sex hormone metabolism promotes severe disease outcome in SARS-CoV-2 infected male golden hamsters
Male sex belongs to one of the risk factors for severe COVID-19 outcome. However, underlying mechanisms that could affect sex dependent disease outcome are yet unknown. Here, we identified the CYP19A1 gene encoding for the testosterone-to-estradiol metabolizing enzyme CYP19A1 (alias aromatase) as a ...
ORGANISM(S): Mesocricetus auratus 
2022-01-21 | E-MTAB-11162 | biostudies-arrayexpress
TranscriptomicsDifferentially expressed genes during the potato-Rhizoctonia solani AG3 interaction
Differential analysis of the potato-Rhizoctonia solani AG3 interaction. Samples were extracted from R. solani inoculated potato sprouts at two time points. R. solani is one of the most prominent fungal pests of potato and therefore of great economic relevance.
ORGANISM(S): Solanum tuberosum 
2020-07-28 | E-MTAB-7137 | biostudies-arrayexpress
TranscriptomicsMetatranscriptome analysis reveals the putative venom toxin repertoire of the biofouling hydroid Ectopleura larynx
Metatranscriptome analysis reveals the putative venom toxin repertoire of the biofouling hydroid Ectopleura larynx
ORGANISM(S): Ectopleura larynx 
2023-09-29 | E-MTAB-13150 | biostudies-arrayexpress
TranscriptomicsImpact of process temperature and organic loading rate on cellulolytic / hydrolytic biofilm microbiomes during biomethanation of ryegrass silage revealed by genome-centered metagenomics and metatranscriptomics
Two-stage two-phase biogas reactor systems consisting each of one batch downflow hydrolysis reactor (HR, vol. 10 L), one process fluid storage tank (vol. 10 L), and one downstream upflow anaerobic filter reactor (AF, vol. 10 L), were operated at mesophilic (M, 37 °C) and thermophilic (T, 55 °C) temp...
ORGANISM(S): soil metagenome 
2019-04-19 | E-MTAB-7533 | biostudies-arrayexpress
TranscriptomicsRNAseq analysis of Xcc strain B100 in minimum media
The dataset is a total transcriptome. RNA samples were obtained from fermentation of the Xcc strain B100 in minimal media named XMD (Schatschneider et al., 2013) with 30 g/L glucose as a sole carbon source and 0.4 g/L KNO3 as the sole nitrogen source . the RNA probes were harvested in the middle of...
ORGANISM(S): Xanthomonas campestris pv. campestris 
2018-01-04 | E-MTAB-5578 | biostudies-arrayexpress
TranscriptomicsRNA-seq of an adult Porites rus colony derived from Indonesia
An adult P. rus colony was imported from Indonesia following the CITES protocols (Permit number 14846/IV/SATS-LN/2007) and kept in the Animal Facilities of the Justus Liebig University, Giessen. The colony was maintained in a circulating artificial seawater system at approximately 26 °C with 20-40 µ...
ORGANISM(S): Porites rus 
2018-05-25 | E-MTAB-6535 | biostudies-arrayexpress
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