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TranscriptomicsEpigenome analysis of normal and cancer tissue from the uterine cervix
The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in normal and cancer tissue from the uterine cervix. There are a total of 63 samples, 15 samples of normal histology and 48 cervical cancers. The normal cervical...
ORGANISM(S): Homo sapiens 
2012-02-23 | E-GEOD-30759 | biostudies-arrayexpress
TranscriptomicsEpigenome analysis of normal cells from the uterine cervix in a nested prospective case control study within the ARTISTIC trial
The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in normal cells from the uterine cervix (liquid based cytology samples), obtained from 152 women in a nested prospective case-control study within the ARTISTIC t...
ORGANISM(S): Homo sapiens 
2012-02-23 | E-GEOD-30758 | biostudies-arrayexpress
TranscriptomicsEpigenome analysis of breast tissue from women with and without breast cancer.
The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in breast tissues from women with and without breast cancer. Breast tissue samples were drawn from 114 breast cancers and 23 non-neoplastic breast tissues. The b...
ORGANISM(S): Homo sapiens 
2012-02-20 | E-GEOD-32393 | biostudies-arrayexpress
TranscriptomicsEpigenome analysis of endometrium tissue from women with metastatic endometrial cancer.
The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in endometrium tissues from women with metastatic endometrial cancer. Endometrium tissue samples were drawn from 18 metastatic endometrial cancers. The metastati...
ORGANISM(S): Homo sapiens 
2012-02-20 | E-GEOD-33422 | biostudies-arrayexpress
TranscriptomicsEpigenome analysis of white blood cells from healthy women with and without BRCA1 mutation.
The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in white blood cells from women with and without BRCA1 mutation. Whole blood samples were drawn from 30 BRCA1 mutation carriers (15 women with breast cancer and ...
ORGANISM(S): Homo sapiens 
2012-02-20 | E-GEOD-32396 | biostudies-arrayexpress
TranscriptomicsDNA methylation profiling of serum DNA samples of the UKCTOCS cohort
The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in serum DNA samples from a total of 282 healthy postmenopausal women of which 134 developed breast cancer within a 5-year follow-up period Bisulphite converted ...
ORGANISM(S): Homo sapiens 
2014-06-03 | E-GEOD-58119 | biostudies-arrayexpress
TranscriptomicsDNA methylation profiling of whole blood DNA samples from BRCA1 wild-types without breast cancer and BRCA1 mutants with and without breast cancer (Prague Set 1)
The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in whole blood DNA samples from 84 women (42 BRCA1 wild-type and healthy, 7 BRCA1 mutants and healthy, 35 BRCA1 mutants with breast cancer) whole blood DNA from ...
ORGANISM(S): Homo sapiens 
2014-05-06 | E-GEOD-57285 | biostudies-arrayexpress
UnknownA comparison of feature selection and classification methods in DNA methylation studies using the Illumina Infinium platform.
Not available
S-EPMC3364843 | biostudies-literature
TranscriptomicsGenome wide DNA methylation profiling of normal breast, normal adjacent and breast cancer tissue
The Illumina Infinium 450k Human DNA methylation Beadchip was used to obtain DNA methylation profiles across approximately 480,000 CpGs in a total of 407 samples, including 50 normal samples from healthy women, 42 matched normal-adjacent breast cancer pairs (84 samples), 263 unmatched breast cancer...
ORGANISM(S): Homo sapiens 
2015-06-18 | E-GEOD-69914 | biostudies-arrayexpress
TranscriptomicsGenome wide DNA methylation profiling of United Kingdom Ovarian Cancer Population Study (UKOPS)
The Illumina Infinium 27k Human DNA methylation Beadchip v1.2 was used to obtain DNA methylation profiles across approximately 27,000 CpGs in whole blood samples from 540 samples, of which 266 were samples taken from postmenopausal women with ovarian cancer and 274 were from age-matched healthy cont...
ORGANISM(S): Homo sapiens 
2010-05-07 | E-GEOD-19711 | biostudies-arrayexpress
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