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ProteomicsNew insight into interactome of plant NDPKs
Interactions between metabolites and proteins play an integral role in all cellular functions. Here we describe an affinity-purification (AP) approach in combination with LC/MS-based metabolomics and proteomics that allows, to our knowledge for the first time, to analyse protein‒metabolite and prote...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-10-09 | PXD006294 | Pride
Metabolites Glutathionylation Affinity purification A. thaliana Ndpk Plant Protein‒metabolite interactions Protein‒protein interactions 
MetabolomicsPROMIS, global analysis of PROtein-Metabolite Interactions using Size separation in Arabidopsis thaliana
Small molecules not only represent cellular building blocks and metabolic intermediates, but also regulatory ligands and signaling molecules that interact with proteins. Although these interactions affect cellular metabolism, growth, and development, they have been largely understudied. Herein, we d...
2018-07-19 | MTBLS94 | MetaboLights
TranscriptomicsPARP_inhibition_transfer
Arabidopsis plants grown in vitro on control media on a nylon mesh; transfered after 7days either to control or 0.2mM 3-Methoxybenzamide (3MB) containing media were sampled after 24, 48, 96 and 168h to obtain data if/how PARP inhibition changes transcription of plants in respect to the observed grow...
ORGANISM(S): Arabidopsis thaliana 
2014-01-24 | E-MTAB-1466 | biostudies-arrayexpress
TranscriptomicsArabidopsis light and temperature response
High-density kinetic analysis of the metabolomic and transcriptomic response of Arabidopsis to temperature and light
ORGANISM(S): Arabidopsis thaliana 
2011-08-09 | E-MTAB-375 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis thaliana leaves grown in different laboratories
Arabidopsis plants were grown in 6 laboratories, and RNA was labeled and hybridized to AGRONOMICS1 arrays.
ORGANISM(S): Arabidopsis thaliana 
2010-03-04 | E-TABM-917 | biostudies-arrayexpress
TranscriptomicsSystems analysis of the response of photosynthesis, metabolism and growth to an increase in irradiance in the photosynthesis model organism Chlamydomonas reinhardtii
Systems analysis reveals that Chlamydomonas reinhardtii responds rapidly and flexibly to an increase in light intensity. Rising metabolite levels and post-translation regulation facilitate a rapid increase in the rate of carbon fixation and a slightly delayed increase in the rate of growth, and slow...
ORGANISM(S): Chlamydomonas reinhardtii 
2014-04-30 | E-GEOD-56800 | biostudies-arrayexpress
TranscriptomicsDeletion of the Mammalian INDY Homologue in Mice Mimics Aspects of Dietary Restriction and Protects Against Diet and Age-Induced Adiposity and Insulin Resistance
Reduction in expression of the INDY gene in Drosophila melanogaster and Caenorhabditis elegans prolongs life span, and in D. melanogaster augments mitochondrial biogenesis in a manner akin to caloric restriction. However, the cellular mechanism by which INDY does this is unknown. In order to examine...
ORGANISM(S): Mus musculus 
2011-08-03 | E-GEOD-29984 | biostudies-arrayexpress
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