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MetabolomicsAberrant accumulation of cyclin D1 rewires glutamine metabolism via loss of IDH3 generating metabolic vulnerability in ESCC and HNSCC

Excessive cyclin D1 accumulation is a frequent oncogenic event in head and neck squamous cell carcinoma (HNSCC) and esophageal squamous cell carcinoma (ESCC). Although classically associated with enhanced proliferation and genomic instability, we reveal that cyclin D1 dysregulation induces unexpe...

2026-08-24 | MTBLS13687 | MetaboLights
TranscriptomicsExpression data from Versican (VCAN) protein treated ovarian cancer cell line OVCA433
Advanced ovarian cancer is the most lethal gynecologic malignancy in the United States. Currently patients are treated by surgical cytoreductive surgery with the aim of reducing tumor burden to microscopic disease followed by adjuvant combined treatment with a platinum and taxane containing chemothe...
ORGANISM(S): Homo sapiens 
2013-12-31 | E-GEOD-40241 | biostudies-arrayexpress
TranscriptomicsPost-natal age is a critical determinant of the neonatal host response to sepsis
Neonates manifest a unique host response to sepsis even among other children. Preterm neonates may experience sepsis soon after birth or during often protracted birth hospitalizations as they attain physiologic maturity. We examined the transcriptome using genome-wide expression profiling on prospec...
ORGANISM(S): Homo sapiens 
2015-07-06 | E-GEOD-69686 | biostudies-arrayexpress
ProteomicsWigington_calcineurinphosphatasesignaling_SWATH_2019
The files are associated with a manuscript submitted for publication by Callie P. Wigington et al. The main goal of this paper was to identify how calcineurin (CN) binds substrates via PxIxIT and LxVP motifs, elucidated through short linear motifs (SLiM) discovery.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-04-16 | MSV000083697 | MassIVE
ProteomicsWigington_calcineurinphosphatasesignaling_2019
The files are associated with a manuscript submitted for publication by Callie P. Wigington et al. The main goal of this paper was to identify how calcineurin (CN) binds substrates via PxIxIT and LxVP motifs, elucidated through short linear motifs (SLiM) discovery.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-04-16 | MSV000083695 | MassIVE
ProteomicsWigington_CalcineurinPhosphataseSignaling
The files are associated with a manuscript submitted for publication by Callie P. Wigington et al. The main goal of this paper was to identify how calcineurin (CN) binds substrates via PxIxIT and LxVP motifs, elucidated through short linear motifs (SLiM) discovery.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-04-15 | MSV000083685 | MassIVE
GenomicsGoT2D: Genetics of Type 2 Diabetes, a study of the the genetic architecture of type 2 diabetes using low pass whole genome sequencing and high density SNP genotyping in 2,657 individuals.
The Genetics of Type 2 Diabetes Consortium (GoT2D) is a collaboration between the University of Michigan, the Broad Institute and the Wellcome Trust Centre for Human Genetics. The overall aim is to extend upon recent efforts, such as genome-wide association studies (GWAS) and large scale meta-analys...
EGAS00001001459 | EGA
UnknownHMG-coenzyme A reductase inhibition, type 2 diabetes, and bodyweight: evidence from genetic analysis and randomised trials.
Not available
S-EPMC4322187 | biostudies-literature
Genomicsena-DATASET-GoT2D/T2D-GENES-09-07-2016-02:03:47:226-1135 - samples
The GoT2D study includes ~2800 samples, half T2D cases and half T2D controls, of Northern European ancestry sequenced over 3 three technologies: deep whole exome sequencing, low-pass (4x) whole genome sequencing, and OMNI 2.5M genotyping. Samples were ascertained to be phenotypically "extreme" (e.g....
EGAD00001002247 | EGA
GenomicsImputation analysis file
This data set includes the following summary level data file used for the imputation data: imputation.sv.assoc.txt: results from single variant association analysis in imputed samples
EGAD00010001184 | EGA
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