Wong K K - OmicsDI

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Unknown (6662)
Transcriptomics (205)
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Organisms

Homo sapiens (213)
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Organisms

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biostudies-arrayexpress (223)
pride (96)
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Disease

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Technology Type

Mass Spectrometry (96)
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HDMSE (2)
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ILLUMINA, Illumina HiSeq 2500, HiSeq X Ten, Illumina HiSeq 2000 (1)
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Instrument Platform

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Instrument (1)
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Publication Date

2025 (35)
2010 (31)
2012 (30)
2013 (27)
2011 (25)
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2019 (19)
2014 (19)
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2017 (3)
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UNIPROT ID/AC

P0A9M8 (1)
P27550 (1)

CHEBI ID

CHEBI:15428 (4)
CHEBI:30769 (4)
CHEBI:48928 (4)
CHEBI:17748 (3)
CHEBI:16680 (3)
CHEBI:18211 (3)
CHEBI:30772 (3)
CHEBI:15354 (3)
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CHEBI:17750 (3)
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CHEBI:15741 (3)
CHEBI:18012 (3)
CHEBI:6650 (3)
CHEBI:15721 (3)
CHEBI:15756 (3)
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CHEBI:15891 (3)
CHEBI:17568 (3)
CHEBI:145338 (2)
CHEBI:140945 (2)
CHEBI:140942 (2)
CHEBI:30089 (1)
CHEBI:15350 (1)
CHEBI:15351 (1)

Metabolite Name

N(1)-acetylspermine (2)
Spermine (2)
N-acetylputrescine (2)
Spermidine (2)
Putrescine (2)
Glycine (2)
Fumarate (2)
Beta-alanine (2)
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Adenosine (2)
Creatine (2)
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Sphingomyelin (d18:2/24:1, d18:1/24:2) (1)
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Cytidine 3'-monophosphate (1)
Anatabine (1)
2-hydroxyoleic acid (1)
13-methylmyristate (1)
Guanosine 2'-monophosphate (2'-GMP) (1)
Pimelate (heptanedioate) (1)
Oxidized glutathione (GSSG) (1)
Reduced glutathione (GSH) (1)
KDPG (1)
FBP (1)
6PG (1)
F1P (1)

First Public Date

2014 (7)
2021 (1)
2019 (1)

Modelling Approach

Computational model (2)
Ordinary differential equation model (1)

Lab affiliation

Core Facility for Medical Bioanalytics Proteomics Platform Tübingen (PxP) Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany. (7)
Department of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA (6)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology and Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Science. Guangzhou, China (2)
Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia (2)
Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia. (2)
Division of Life Science, The Hong Kong University of Science and Technology, Hong Kong SAR, China (2)
Functional Proteomics, ICR (2)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchatel, Switzerland (2)
1. Department of Renal Medicine, Flinders Medical Centre, South Australia, Australia. 2. College of Medicine and Public Health, Flinders University, South Australia, Australia. (1)
1. Tuberculosis Research Program Centenary Institute, The University of Sydney, Camperdown, NSW 2050, Australia 2. The University of Sydney, Discipline of Infectious Diseases & Immunology and Sydney Institute for Infectious Diseases, Camperdown, NSW 2050, Australia (1)
1.Department of Biochemistry, Faculty of Science, Kasetsart University, 50 Ngam Wong Wan Road, Chatuchak, Bangkok 10900, Thailand 2.Center for Advanced Studies in Nanotechnology for Chemical, Food and Agricultural Industries, KU Institute for Advanced Studies, Kasetsart University, Bangkok, 10900, Thailand (1)
A*STAR-SRIS (1)
Allakos Inc. (1)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (1)
Associate Professor in the Department of Biosciences Durham University UK (1)
Bioprocessing Technology Institute (BTI), Agency for Science, Technology and Research (A*STAR), 20 Biopolis Way, #06-01 Centros, Singapore 138668, Singapore (1)
Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver V5Z 1L3, Canada (1)
Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver V5Z 1L3, Canada. (1)
Cell Fate Engineering and Therapeutics Lab, Institute of Molecular and Cell Biology (IMCB), Agency for Science, Technology and Research (A*STAR), 61 Biopolis Drive, Proteos, Singapore 138673, Republic of Singapore (1)
Center for Proteomics and Metabolomics Leiden University Medical Center (1)
Centre for Genomics and Computational Biology Barts Cancer Institute Queen Mary, University of London John Vane Science Centre, Charterhouse Square, London EC1M 6BQ Tel: +44 (0)20 7882 8266 | Fax: +44 (0)20 7882 3891 | Email: p.cutillas@qmul.ac.uk (1)
Centre for Targeted Protein Degradation (CeTPD) University of Dundee (1)
Chemical and Biological Engineering, The Hong Kong University of Science and Technology (HKUST), Hong Kong (lab head) (1)
Chief Scientific Officer oNKo-innate Pty Ltd Laboratory Head, Huntington Laboratory Monash Biomedicine Discovery Institute Monash University Victoria Australia (1)
Core Facility for Medical Bioanalytics Proteomics Platform Tübingen (PxP) Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany. (1)
Core Facility for Medical Bioanalytics Proteomics Platform Tübingen (PxP) Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany (1)
Deparatment of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA (1)
Department of Anatomy and Developmental Biology, Australian Regenerative Medicine Institute, Monash University, Australia (1)
Department of Applied Biology and Chemical Technology The Hong Kong Polytechnic University (1)
Department of Biochemistry and Molecular Biology Head Immunoproteomics Laboratory Infection and Immunity Program Monash Biomedicine Discovery Institute Monash University, Clayton Campus Clayton 3800 Victoria Australia (1)

IsPrivate

False (3)

Submitter Keywords

Ersilia (2)
FAIR-AIML (2)
Machine Learning Model (2)

Classification

protozoa (6)

Modification

2x(15)N labeled L-lysine (2)
4x(15)N labeled L-arginine (2)
4x(2)H labeled dimethylated L-lysine (2)
N6 (1)
N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (132)
RNA-seq of coding RNA (21)
ChIP-seq (17)
Unknown experiment type (14)
Comparative genomic hybridization by array (7)
Methylation profiling by array (7)
RNAi profiling by array (3)
Genotyping by array (3)
Other (2)
DNA-seq (2)
RNA-seq of coding RNA from single cells (2)
RNA-seq of non coding RNA (2)
RNA-seq of non coding RNA from single cells (1)
Differential (1)
Animal - One-color microarray (1)
ChIP-chip by tiling array (1)
Cell line - One-color microarray (1)
Human - One-color microarray (1)
Animal - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
MicroRNA profiling by high throughput sequencing (1)
MicroRNA profiling by array (1)

Release Date

2022 (814)
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2012 (150)
2011 (121)
2026 (106)
2010 (101)
2009 (75)
2008 (53)
2007 (36)
2006 (25)
2005 (22)
2004 (14)
2002 (4)
2001 (3)
2000 (3)
1998 (3)
2003 (2)
1999 (2)
1997 (1)

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Proteomic study of evolved P. aeruginosa strains grown in S. aureus- and K. pneumoniae-conditioned media

In this research, Pseudomonas aeruginosa underwent evolution in the supernatant of either S. aureus (SA) or K. pneumoniae (KP). Through this evolution process, we enriched a sufficient number of bacterial cells along with their corresponding proteins. Following 15 cultivation cycles, notable changes...

ORGANISM(S): Pseudomonas aeruginosa PAO1

2025-05-21 | PXD059669 | Pride

Temporal dissection of K-ras(G12D) mutant in vitro and in vivo using a regulatable K-ras(G12D) mouse allele.

Not available

S-EPMC3350485 | biostudies-literature

P. falciparum (lab strain 3d7) schizonts untreated control vs P. falciparum (lab strain 3d7) reference RNA pool

Calcium is a universal second messenger molecule which plays a significant role in several biological processes. Presence of calcium sensors (calmodulins) and calcium-dependent protein kinases in Plasmodium species suggests an important role of calcium-dependent signaling pathways in the regulation ...

ORGANISM(S): Plasmodium falciparum 3D7

2012-07-14 | E-GEOD-33795 | biostudies-arrayexpress

extracellular calcium chelation experiment_P. falciparum (lab strain 3d7) schizonts treated with ionomycin vs P. falciparum (lab strain 3d7) reference RNA pool

ORGANISM(S): Plasmodium falciparum 3D7

2012-07-14 | E-GEOD-33835 | biostudies-arrayexpress

extracellular calcium chelation experiment_P. falciparum (lab strain 3d7) schizonts untreated vs P. falciparum (lab strain 3d7) reference RNA pool

ORGANISM(S): Plasmodium falciparum 3D7

2012-07-14 | E-GEOD-33834 | biostudies-arrayexpress

extracellular calcium chelation experiment_P. falciparum (lab strain 3d7) schizonts treated with EGTA and ionomycin vs P. falciparum (lab strain 3d7) reference RNA pool

ORGANISM(S): Plasmodium falciparum 3D7

2012-07-14 | E-GEOD-33836 | biostudies-arrayexpress

Two Total Syntheses of Trigoxyphins K and L.