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MetabolomicsA Phosphate starvation response gene (psr1-like) is present in Micromonas pusilla and other marine algae and coordinates the metabolic response to phosphate deficiency
Both marine phytoplankton and terrestrial plants have to deal with limited bioavailability of the key life nutrient, phosphate. In freshwater algae and plants, a phosphate starvation response gene (psr1) has been characterized, which encodes for a transcription factor that regulates the metabolic re...
2016-02-01 | MTBLS295 | MetaboLights
ProteomicsPacific Ocean metaproteomics, METZYME KM1128
Global metaproteomic analyses of microbial biomass from the upper water column of the Central Pacific Ocean. This dataset was used as a discovery dataset to identify peptide biomarkers for cyanobacterial populations for use in targeted metaproteomic calibrated multiple reaction monitoring (MRM) anal...
ORGANISM(S): environmental samples 
2019-02-12 | PXD009712 | Pride
Metaproteomics proteomics oceanography oceanic proteome 
TranscriptomicsSeasonal differences in expression patterns of LMPC-enriched poplar wood rays
Ray cells were enriched from wood samples of poplar (Populus x canescens) by LMPC and transcripts monitored by poplar whole genome microarrays. Results provided insight into molecular processes during the transition from dormancy to flowering in early spring in contrast to the active growth phase in...
ORGANISM(S): Populus tremula x Populus alba 
2012-12-05 | E-GEOD-33977 | biostudies-arrayexpress
TranscriptomicsTranscriptome reorganization during wood maturation in Pinus radiata
Wood maturation produces two distinct wood tissues: juvenile wood (JW) and mature wood (LW), which are the major cause of wood qaulity variation within a tree. We investigate transcriptome reorganization during wood maturation process in radiata pine using a newly developed 18k cDNA microarrays. Dev...
ORGANISM(S): Pinus radiata 
2011-06-01 | E-GEOD-20535 | biostudies-arrayexpress
TranscriptomicsTranscriptome reorganization during seasonal wood development in Pinus radiata
Seasonal wood development results in two distinct wood types: earlywood (EW) and latewood (LW), which is the major cause of wood qaulity variation. We investigate transcriptome reorganization during seasonal wood development in radiata pine using a newly developed 18k cDNA microarrays. Three samplin...
ORGANISM(S): Pinus radiata 
2010-10-08 | E-GEOD-15230 | biostudies-arrayexpress
MetabolomicsRelease of Ecologically Relevant Metabolites by the Cyanobacterium, Synechococcus elongatus CCMP 1631
Phytoplankton are known to release organic compounds that fuel secondary production by heterotrophic bacteria. Here we show that an abundant marine cyanobacterium, Synechococcus elongatus, contributes a variety of nitrogen-rich and sulfur-containing compounds to dissolved organic matter. A combinati...
2015-01-26 | MTBLS155 | MetaboLights
MetabolomicsDissolved organic matter produced by Thalassiosira pseudonana
Phytoplankton are significant producers of dissolved organic matter (DOM) in marine ecosystems but the identity and dynamics of this DOM remain poorly constrained. Knowledge on the identity and dynamics of DOM are crucial for understanding the molecular-level reactions at the base of the global carb...
2014-12-12 | MTBLS144 | MetaboLights
UnknownBurnt Plastic (Pyroplastic) from the M/V <i>X-Press Pearl</i> Ship Fire and Plastic Spill Contain Compounds That Activate Endocrine and Metabolism-Related Human and Fish Transcription Factors.
Not available
S-EPMC11744394 | biostudies-literature
UnknownSynoptic assessment of coastal total alkalinity through community science.
Not available
S-EPMC8780830 | biostudies-literature
TranscriptomicsEucalyptus grandis BC progeny
The gene expression profiles of the differentiating xylem of 91 Eucalyptus grandis backcross individuals were characterized following a loop design (Churchill, G.A. Nat Genet. 2002 Dec;32 Suppl:490-5). In this design, RNA from genotype 1666 (labeled with Cy5) was hybridized with RNA from genotype 16...
ORGANISM(S): Eucalyptus grandis 
2010-06-05 | E-GEOD-502 | biostudies-arrayexpress
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