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Unknown
(12159)
Transcriptomics
(636)
Genomics
(378)
Proteomics
(286)
Multiomics
(78)
Metabolomics
(32)
Methylation profiling
(6)
Genomic
(3)
Organisms
Homo sapiens
(339)
Arabidopsis thaliana
(162)
Mus musculus
(160)
Streptomyces coelicolor
(19)
Saccharomyces cerevisiae
(16)
Drosophila melanogaster
(13)
Rattus norvegicus
(13)
Caenorhabditis elegans
(11)
Escherichia coli
(9)
Gallus gallus
(5)
Zea mays
(4)
Bacillus subtilis subsp. subtilis str. 168
(3)
Streptomyces venezuelae
(3)
Oryza sativa Japonica Group
(3)
Danio rerio
(3)
Macaca mulatta
(3)
Euphorbia esula
(2)
Pseudomonas syringae pv. tomato str. DC3000
(2)
synthetic construct
(2)
Streptomyces coelicolor A3(2)
(2)
Streptococcus agalactiae
(2)
Sus scrofa
(2)
Brassica napus
(2)
Mycobacterium avium 104
(1)
Cicer arietinum
(1)
Thalassiosira pseudonana CCMP1335
(1)
Prochlorococcus marinus subsp. pastoris str. CCMP1986
(1)
Arachis hypogaea
(1)
Aspergillus nidulans
(1)
Yersinia pestis
(1)
Organisms
Arabidopsis thaliana
(89)
Homo sapiens
(61)
Mus musculus
(19)
Gallus gallus
(4)
Lathyrus oleraceus
(3)
compost metagenome
(3)
Caenorhabditis elegans
(3)
Haliotis kamtschatkana
(2)
Burkholderia multivorans
(2)
Haladaptatus ordinarius
(2)
Halomicrococcus pelagicus
(2)
Macaca mulatta
(2)
Aspergillus niger
(2)
Aeromonas media WS
(1)
Propioniciclava flava
(1)
Chlamydia psittaci WS/RT/E30
(1)
Paenilisteria weihenstephanensis
(1)
Cupriavidus sp. WS
(1)
Mycoplasma sp. MBB_CS52
(1)
Algibacter lectus
(1)
Domibacillus robiginosus
(1)
Salinilacihabitans sp. SG-WS-28
(1)
Erwinia persicina
(1)
Withania somnifera
(1)
Haladaptatus sp. DJG-WS-42
(1)
Zonotrichia albicollis
(1)
Pelagibacterium mangrovi
(1)
Vibrio casei WS 4539
(1)
Zanthoxylum bungeanum
(1)
Trachinotus carolinus
(1)
Repository
biostudies-arrayexpress
(558)
ENA
(310)
pride
(147)
geo
(133)
PeptideAtlas
(78)
MetaboLights
(28)
EGA
(24)
MassIVE
(21)
iProX
(20)
PanoramaPublic
(7)
jPOST
(4)
PAXDB
(4)
dbGaP
(3)
GNPS
(3)
EVA
(1)
MetabolomicsWorkbench
(1)
Tissue
Others
(24)
Cell culture
(24)
Digestive System
(11)
Fibroblast
(9)
Liver
(9)
Leaf
(8)
Blood plasma
(7)
Whole body
(7)
Heart
(6)
Liver
(6)
Male Reproductive System
(6)
Epithelial cell
(6)
Plant cell
(6)
Saliva
(6)
Female Reproductive System
(5)
Heart
(5)
Brain
(4)
Brain
(4)
Adrenal Gland
(3)
Eye
(3)
Kidney
(3)
Lung
(3)
Blood
(3)
Cell suspension culture
(3)
Kidney
(3)
Placenta
(3)
T cell
(3)
Pancreas
(2)
Urinary Bladder
(2)
Plant
(1)
Disease
Disease free
(6)
Normal
(3)
Cardiovascular system disease
(3)
Brain cancer
(2)
Human immunodeficiency virus infectious disease
(2)
Wounded; tumour
(1)
Large cell neuroendocrine carcinoma
(1)
Tumor
(1)
Acute myeloid leukaemia
(1)
Imatinib-resistant CML cell line subclone
(1)
Severe acute respiratory syndrome
(1)
2h after infection with wildtype Streptococcus pyogenes
(1)
Healthy
(1)
Rheumatoid arthritis
(1)
Glioblastoma
(1)
Adenocarcinoma
(1)
Multiple myeloma
(1)
Neuroblastoma
(1)
Amyotrophic lateral sclerosis
(1)
Autoimmune hepatitis
(1)
B-cell lymphoma
(1)
Bacterial infectious disease
(1)
Brain ischemia
(1)
Colon cancer
(1)
Dental caries
(1)
Hyperhomocysteinemia
(1)
Lymphoma
(1)
Lysosomal storage disease
(1)
Malignant neoplasm of ovary
(1)
Multiple sclerosis
(1)
Technology Type
Mass Spectrometry
(148)
Shotgun proteomics
(70)
Bottom-up proteomics
(29)
Mass spectrometry
(20)
Data-dependent acquisition
(17)
Gel-based experiment
(15)
Affinity purification coupled with mass spectrometry proteomics
(12)
Top-down proteomics
(9)
Data-independent acquisition
(7)
NMR spectroscopy
(4)
Mass spectrometry assay
(4)
SWATH MS
(3)
Affinity proteomics
(2)
Chemical cross-linking coupled with mass spectrometry proteomics
(2)
HDMSE
(2)
Illumina HiSeq 2500, ILLUMINA
(1)
ILLUMINA, Illumina HiSeq 2000
(1)
EI
(1)
All-ion fragmentation
(1)
DiaPASEF
(1)
Immunopeptidomics
(1)
SRM/MRM
(1)
Instrument Platform
Illumina HiSeq 2500
(17)
Illumina NovaSeq 6000
(7)
NextSeq 500
(7)
Illumina HiSeq 2000
(6)
Illumina HiSeq 4000
(5)
DNBSEQ-G400
(3)
Illumina HiSeq 1500
(3)
Axon GenePix 4000A scanning hardware
(2)
Agilent Micro Array Scanner G2565CA
(2)
GenePix 4000A [Axon Instruments]
(2)
Affymetrix
(2)
IPK PhenoSphere
(1)
GeneChip Scanner 2500
(1)
Not
(1)
The GeneChip Instrument System
(1)
Affymetrix GeneChip Instrument System
(1)
I686
(1)
Illumina Hiseq 2500
(1)
OpenArray NT cycler
(1)
PCR Applied Biosystems
(1)
Qubit
(1)
In Silico Molecular Cloning Program
(1)
MouseWG-6_V2_0_R1_11278593_A
(1)
Illumina Genome Analyzer
(1)
GeneChip Scanner 3000 [Affymetrix]
(1)
Other
(1)
418 [Affymetrix]
(1)
Illumina NovaSeq X
(1)
MinION
(1)
Illumina HiSeq 3000
(1)
Publication Date
2014
(124)
2010
(78)
2011
(68)
2015
(64)
2013
(64)
2012
(50)
2021
(48)
2016
(46)
2025
(42)
2009
(40)
2024
(37)
2022
(36)
2019
(36)
2018
(36)
2007
(36)
2008
(33)
2023
(28)
2017
(28)
2026
(26)
2020
(26)
2005
(19)
2006
(15)
2004
(3)
2003
(3)
UNIPROT ID/AC
4513.MLOC_10050.1
(4)
4513.MLOC_11337.1
(4)
4513.MLOC_12451.3
(4)
4513.MLOC_12540.1
(4)
4513.MLOC_13014.1
(4)
4513.MLOC_1306.2
(4)
4513.MLOC_13372.1
(4)
4513.MLOC_14606.2
(4)
4513.MLOC_14794.1
(4)
4513.MLOC_14971.1
(4)
4513.MLOC_16236.1
(4)
4513.MLOC_16279.1
(4)
4513.MLOC_16373.1
(4)
4513.MLOC_16646.2
(4)
4513.MLOC_18019.1
(4)
4513.MLOC_19829.1
(4)
4513.MLOC_20396.2
(4)
4513.MLOC_20762.1
(4)
4513.MLOC_22034.1
(4)
4513.MLOC_23198.1
(4)
4513.MLOC_24214.1
(4)
4513.MLOC_24218.1
(4)
4513.MLOC_2612.1
(4)
4513.MLOC_26549.1
(4)
4513.MLOC_26766.1
(4)
4513.MLOC_28610.1
(4)
4513.MLOC_29257.1
(4)
4513.MLOC_29799.1
(4)
4513.MLOC_30920.1
(4)
4513.MLOC_33483.1
(4)
ENSEMBL ID
ENSG00000170477
(76)
ENSG00000229353
(51)
ENSG00000147251
(29)
ENSG00000247315
(17)
ENSG00000204131
(10)
ENSG00000214897
(3)
ENSG00000176092
(2)
CHEBI ID
CHEBI:25017
(8)
CHEBI:28044
(8)
CHEBI:15741
(8)
CHEBI:15428
(8)
CHEBI:17992
(7)
CHEBI:6650
(7)
CHEBI:18186
(6)
CHEBI:17234
(6)
CHEBI:27266
(6)
CHEBI:16704
(6)
CHEBI:18237
(6)
CHEBI:16865
(6)
CHEBI:16750
(6)
CHEBI:16335
(6)
CHEBI:17596
(6)
CHEBI:22660
(5)
CHEBI:28757
(5)
CHEBI:28300
(5)
CHEBI:15891
(5)
CHEBI:16958
(5)
CHEBI:28842
(5)
CHEBI:18050
(5)
CHEBI:16977
(5)
CHEBI:78320
(5)
CHEBI:18012
(5)
CHEBI:17053
(5)
CHEBI:15940
(5)
CHEBI:27897
(5)
CHEBI:17295
(5)
CHEBI:30769
(5)
Metabolite Name
Adenosine
(5)
Leucine
(4)
Sucrose
(4)
Succinic acid
(4)
Phenylalanine
(4)
Glycine
(3)
Uridine
(3)
Inosine
(3)
Lactate
(3)
L-alanine
(3)
Succinate
(3)
Uracil
(3)
Glycine
(3)
Glycerol
(3)
Valine
(3)
Citric acid
(3)
Tyrosine
(3)
Proline
(3)
L-Glutamine
(3)
Glucose
(3)
Adenine
(3)
Glutamic acid
(3)
Guanosine
(3)
Urea
(3)
Inosine
(3)
Gamma-Aminobutyric Acid
(2)
Gamma-aminobutyrate
(2)
Oxaloacetic acid
(2)
Nicotinate
(2)
Cucurbic acid
(2)
First Public Date
2014
(63)
2024
(45)
2025
(31)
2021
(24)
2019
(24)
2015
(19)
2017
(17)
2022
(15)
2020
(14)
2026
(13)
2023
(12)
2018
(11)
2016
(11)
2013
(9)
2012
(1)
2011
(1)
Classification
bacteria
(8)
fungi
(2)
Modification
Not available
(2)
4x(2)H labeled dimethylated L-lysine
(1)
Study type
Transcription profiling by array
(386)
RNA-seq of coding RNA
(56)
ChIP-seq
(26)
Comparative genomic hybridization by array
(8)
ChIP-chip by tiling array
(6)
RNAi profiling by array
(6)
Methylation profiling by array
(6)
Methylation profiling by high throughput sequencing
(6)
Genotyping by array
(5)
Other
(5)
RNA-seq of coding RNA from single cells
(5)
Proteomic profiling by array
(4)
RNA-seq of non coding RNA
(4)
Unknown experiment type
(3)
DNA-seq
(3)
Transcription profiling by SAGE
(2)
High-throughput sequencing
(2)
Animal - High-throughput sequencing
(2)
Cell line - High-throughput sequencing
(2)
Transcription profiling by tiling array
(2)
ChIP-chip by array
(2)
Spatial transcriptomics by high-throughput sequencing
(2)
MicroRNA profiling by array
(2)
RNA-seq of total RNA
(2)
ChIP-chip by SNP array
(1)
RNA-seq of non coding RNA from single cells
(1)
One-color microarray
(1)
Cell line - One-color microarray
(1)
Translation profiling
(1)
Proteomic profiling by mass spectrometer
(1)
Release Date
2022
(1305)
2021
(1211)
2023
(1180)
2025
(1051)
2024
(983)
2020
(966)
2019
(817)
2018
(718)
2017
(683)
2016
(569)
2015
(555)
2014
(445)
2013
(396)
2011
(315)
2010
(314)
2012
(284)
2009
(198)
2008
(164)
2026
(159)
2007
(106)
2006
(77)
2005
(70)
2004
(31)
2003
(30)
2001
(22)
2000
(19)
1999
(17)
2002
(16)
1998
(8)
1997
(3)
Lab affiliation
Research Group Mitochondrial Disorders, Institute of Human Genetics, Technische Universität München, München, Germany
(5)
Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA
(3)
University of Washington, Department of Genome Sciences
(3)
Department of Chemical Engineering, Laboratory of Cellular and Biomolecular Engineering, Soongsil University, Republic of Korea
(2)
Department of Ecogenomics and Systems Biology, University of Vienna, Althanstrasse 14, 1090 Vienna, Austria
(2)
Department of Mathematics and Computer Science, University of Antwerp, Belgium
(2)
Lung and Vascular Inflammation Section, Laboratory of Allergic Diseases, NIAID/NIH Bethesda, MD 20892, USA
(2)
University of Bordeaux, Inserm, UMR1312, BRIC, BoRdeaux Institute of onCology, 146 Rue Léo Saignat, Bordeaux, F-33076, France.
(2)
University of Cincinnati Department of Pathology and Laboratory Medicine
(2)
University of Washington
(2)
1. Research Institute for Medical and Health Sciences, University of Sharjah, Sharjah, United Arab Emirates. 2. College of Pharmacy, Department of Medicinal Chemistry, University of Sharjah, United Arab Emirates
(1)
Assistant Professor DEPARTMENT OF OBSTETRICS & GYNAECOLOGY Faculty of Medicine The University of HOng Kong
(1)
Assistant Professor, Surgery
(1)
Australian Proteome Analysis Facility
(1)
BK21 Plus KNU Multi-Omics-based Creative Drug Research Team, College of Pharmacy, Research Institute of Pharmaceutical Sciences, Kyungpook National University, Republic of Korea
(1)
Basilbiotech, Incheon 22002, Republic of Korea.
(1)
Biogen Inc., 225 Binney St, Cambridge, MA 02142, USA; Laboratory of Inflammation Research, School of Life Science, Handong Global University, 558 Handong-ro, Buk-gu, Pohang, Gyeongbuk 37554, Republic of Korea
(1)
Biological Chemistry and Molecular Pharmacology, Harvard Medical School Cancer Biology, Dana-Farber Cancer Institute
(1)
Biology department, Washington University in St Louis, St Louis, MO, USA
(1)
Biomedical Sciences
(1)
Boston Children's Hospital | Harvard Medical School
(1)
Brigham and Women's Hospital; Harvard Medical School
(1)
CEA Grenoble, Commissariat à l'Energie Atomique et aux Energies Alternatives
(1)
Cagliari University
(1)
Canadian Food Inspection Agency, Ottawa laboratory Fallowfield, Canada University of Ottawa, Canada
(1)
Cellzome GmbH, Heidelberg, Germany
(1)
Center for Theragnosis, Korea Institute of Science and Technology, Seoul, Korea
(1)
Centre de recherche du CHU de Québec, Faculty of Medicine, Université Laval, Quebec City Québec, Canada
(1)
Centre scientifique de Monaco, Monaco
(1)
Chemistry and Biochemistry Department, Montana State University, Bozeman, MT 59717
(1)
Tags
pathogen
(10)
pathogen:bacterium
(8)
xref:PubMed:38858384
(7)
xref:PubMed:17172353
(4)
xref:PubMed:19794116
(3)
xref:PubMed:36114168
(2)
xref:PubMed:40846643
(2)
xref:PubMed:17827272
(2)
xref:PubMed:42382428
(2)
xref:PubMed:30866818
(2)
xref:PubMed:25736223
(2)
xref:PubMed:26740550
(2)
xref:PubMed:26521679
(2)
xref:PubMed:29494634
(2)
xref:PubMed:30362171
(2)
xref:PubMed:20974729
(2)
pathogen:fungus
(2)
xref:ArrayExpress:E-MTAB-4730
(1)
xref:PubMed:35874513
(1)
xref:PubMed:27591279
(1)
xref:PubMed:34685886
(1)
xref:PubMed:37559350
(1)
xref:PubMed:21241330
(1)
xref:PubMed:22516818
(1)
xref:PubMed:21673996
(1)
xref:PubMed:19966276
(1)
xref:PubMed:40473890
(1)
xref:PubMed:33564861
(1)
xref:PubMed:27432888
(1)
xref:PubMed:25295754
(1)
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Aeromonas media WS strain:WS
Aeromonas media WS strain:WS Genome sequencing
PRJNA170164
|
ENA
Cite
Cupriavidus sp. WS strain:WS
Cupriavidus sp. WS strain:WS Genome sequencing and assembly
PRJNA195550
|
ENA
Cite
Haladaptatus sp. DJG-WS-42
Haladaptatus sp. DJG-WS-42 Genome sequencing
PRJNA1076094
|
ENA
Cite
Salinilacihabitans sp. SG-WS-28
Salinilacihabitans sp. SG-WS-28 Genome sequencing
PRJNA1491532
|
ENA
Cite
Bacillus amyloliquefaciens strain:WS-8
Bacillus amyloliquefaciens strain:WS-8 Genome sequencing
PRJNA354791
|
ENA
Cite
Burkholderia multivorans strain:WS-FJ9
Burkholderia multivorans strain:WS-FJ9 Raw sequence reads
PRJNA323687
|
ENA
Cite
Pelagibacterium mangrovi strain:WS-203
Pelagibacterium mangrovi strain:WS-203 Genome sequencing and assembly
PRJNA1074426
|
ENA
Cite
Erwinia persicina strain:Ws-A10
Erwinia persicina strain:Ws-A10 Genome sequencing and assembly
PRJNA1508331
|
ENA
Cite
Haladaptatus ordinarius strain:NG-WS-4
Haladaptatus ordinarius strain:NG-WS-4 Genome sequencing
PRJNA1276880
|
ENA
Cite
Halomicrococcus pelagicus strain:SG-WS-1
Halomicrococcus pelagicus strain:SG-WS-1 Genome sequencing
PRJNA1276882
|
ENA
Cite
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