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ProteomicsGlobal proteomic profiling of Salmonella infection by a giant phage
The 240-kb Salmonella phage SPN3US genome encodes 264 gene products, many of which are functionally uncharacterized. We have previously used mass spectrometry to define the proteomes of wild-type and mutant forms of the SPN3US virion. In this study we sought to determine if this technique was suit...
ORGANISM(S): Salmonella phage SPN3US 
2018-11-21 | PXD011697 | Pride
Salmonella Phage spn3us Infection 
ProteomicsGlobal proteomic profiling of Salmonella infection by a giant phage - 2 sample SPN3US experiment
Preliminary analyses of Salmonella cells infected with phage SPN3US and a control at 20 minutes post infection.
ORGANISM(S): Salmonella phage SPN3US 
2018-11-21 | PXD011521 | Pride
Salmonella Phage spn3us 
ProteomicsProteomic analyses of Pseudomonas infected with giant phage PhiKZ
Preliminary analyses of Pseudomonas aeruginosa cells infected with phage PhiKZ and a control at 20 minutes post infection.
ORGANISM(S): Pseudomonas phage phiKZ 
2018-11-21 | PXD011520 | Pride
Phikz Pseudomonas Infection 
ProteomicsMass spectrometry of Phage PhiKZ gp54 with the prohead protease gp175
Assay of recombinant Pseudomonas phage PhiKZ gp54 with the prohead protease gp175. The gene for each protein was cloned into the expression plasmid DH10B. The assay was conducted in a lysate of E. coli DH10B cells, conditions in which PhiKZ gp175 had previously been shown to be active. Analyses o...
ORGANISM(S): Pseudomonas phage phiKZ 
2018-11-21 | PXD011519 | Pride
Prohead protease Pseudomonas phage phikz 
Proteomics,MultiomicsAPOBEC3A is an Oral Cancer Prognostic Biomarker in Taiwanese Carriers of an APOBEC Deletion Polymorphism
Chen T-W, Lee C-C, Liu H, Wu C-S, Pickering CR, Huang P-J, et al., Nature Communications 8, Article number: 465 (2017) doi:10.1038/s41467-017-00493-9

Oral squamous cell carcinoma is a prominent cancer worldwide, p...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-08-28 | MSV000084250 | MassIVE
UnknownThe Effect of Artemisinin-Based Drugs vs Non-artemisinin-based Drugs on Gametophyte Carrying in the Body After the Treatment of Uncomplicated Falciparum Malaria: A Systematic Review and Meta-analysis.
Not available
S-EPMC8770988 | biostudies-literature
Proteomics2017 gddy+M1
This project is to investgate the effect of M1 compound in gddy mice
ORGANISM(S): Mus musculus (Mouse) 
2020-04-02 | PXD008431 | Pride
2d lc-ms/ms Mouse 
TranscriptomicsTranscriptomic analysis of TLR4 pathways in a murine model of chronic pulmonary inflammation and carcinogenesis
Toll like receptor 4 (TLR4), an innate immunity gene, is involved in responses to several pulmonary agonists including endotoxin (LPS; Poltorak et al.,1998), ozone (O3 ,Kleeberger et. al., 2001), Pseudomonas aeruginosa (Faure et al, 2004), and hyperoxia (Zhang et al, 2005). TLR4 appears to partially...
ORGANISM(S): Mus musculus 
2009-12-12 | E-GEOD-8504 | biostudies-arrayexpress
ProteomicsMonitor precursor mass shifts of Halobacterium salinarum
Approximately 2x106 CL1-5 and H23 cells were seeded on 10-cm dishes with RPMI-1640 medium containing 10% fetal bovine serum. After the cells covered 80% of the dish, cells were serum-starved for 24 h in RPMI-1640 medium. CL1-5 and H23 cell lysates were harvested, trypsinized and analyzed by using LT...
ORGANISM(S): Homo sapiens (Human) Halobacterium salinarum 
2020-01-14 | PXD000082 | Pride
Cl1-5 lysate Nrc-1 gvd lysate Nrc-1 lysate Ltq-orbitrap xl Ltq-orbitrap discovery H23 lysate Human nsclc cell line Halobacterium salinarum nrc-1 Lc-ms/ms 
TranscriptomicsComparative genomic hybridization of Anaplasma emerging human ehrlichiosis agents
Not available
ORGANISM(S): Anaplasma phagocytophilum 
2005-01-01 | E-TIGR-125 | biostudies-arrayexpress
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