Sort   by:  
 Page size 
TranscriptomicsNext generation sequencing identifies differentially localized transcripts in Xenopus laevis and Xenopus tropicalis oocytes
RNA-seq technology was used to identify differentially localized transcripts from Xenopus laevis and Xenopus tropicalis stage VI oocytes. Besides the discovery of a group of novel animally enriched RNAs, this study revealed a surprisingly low conservation of vegetal RNA localization between the two ...
ORGANISM(S): Xenopus (Silurana) tropicalis 
2015-12-09 | E-GEOD-58420 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse, bovine and xenopus germinal vesicle stage oocytes reveals a high degree of conservation among species
Comparative analysis of bovine, mouse and xenopus oocyte transcript profiles. The results from bovine and xenopus germinal vesicle stage oocytes in this experiment were compared to previously-published microarray data on preimplantation development in the mouse (Carter 2003).
ORGANISM(S): Xenopus laevis 
2008-02-01 | E-MEXP-1339 | biostudies-arrayexpress
TranscriptomicsStable intronic sequence RNA (sisRNA), a new class of noncoding RNA from the oocyte nucleus of Xenopus tropicalis
To compare nuclear and cytoplasmic RNA from a single cell type, free of cross-contamination, we studied the oocyte of the frog Xenopus tropicalis, a giant cell with an equally giant nucleus. We isolated RNA from manually dissected nuclei and cytoplasm of mature oocytes and subjected it to deep seque...
ORGANISM(S): Xenopus (Silurana) tropicalis 
2012-11-26 | E-GEOD-41530 | biostudies-arrayexpress
TranscriptomicsChromatin immunoprecipitation to identify CUG-BP1/EDEN-BP target mRNAs in Xenopus tropicalis eggs
Identification of RNA bound to the RNA-binding protein CUGBP1/EDENBP in Xenopus tropicalis eggs.
ORGANISM(S): Xenopus tropicalis 
2008-02-21 | E-MEXP-1466 | biostudies-arrayexpress
TranscriptomicsMicroarray analysis of mRNAs enriched in the vegetal cortex of Xenopus oocytes
RNA localization is a fundamental mechanism for controlling the spatial regulation of protein synthesis within cells, as well as differential cell fates during early development. Localized RNAs are known to control critical aspects of early Xenopus development, but few have been studied in detail. W...
ORGANISM(S): Xenopus laevis 
2009-12-30 | E-GEOD-17713 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Xenopus tropicalis oocytes during maturation and early cleavage stages to identify post-transcriptionally regulated Xenopus tropicalis maternal mRNAs
Determine the adenylation state of maternal mRNAs during oocyte maturation and early cleavage stages of the xenopus tropicalis embryos
ORGANISM(S): Xenopus tropicalis 
2007-09-30 | E-MEXP-1236 | biostudies-arrayexpress
TranscriptomicsDeep sequencing of small RNAs in the Xenopus tropicalis gastrula
Transposable elements comprise a large proportion of animal genomes. Transcripts of transposable elements are a source for the synthesis of endogenous siRNAs and piRNAs. In order to determine if small RNAs mapped to expressed Tc1-like elements are present during early Xenopus tropicalis development,...
ORGANISM(S): Xenopus (Silurana) tropicalis 
2011-06-18 | E-GEOD-30067 | biostudies-arrayexpress
GenomicsSystematic and single cell analysis of Xenopus Piwi-interacting RNAs and Xiwi
Various small RNA libraries from purified microtubules or Xiwi immunoprecipitates or total extract from X.tropicalis or X.laevis egg extract. Various small RNA libraries from single X.tropicalis eggs. Analysis of this series of files is described in the manuscript "Systematic and single cell ...
ORGANISM(S): Xenopus (Silurana) tropicalis 
2009-08-31 | E-GEOD-15556 | biostudies-arrayexpress
TranscriptomicsHigh-throughput sequencing of small RNAs from Xenopus tropicalis
High-throughput sequencing of small RNAs from Xenopus tropicalis (adult liver, adult skin, oocytes stage I, II, III, IV, V, VI). total RNA, ~18-42 nt RNAs isolated using PAGE, ligation to adapters requires 5' monophosphate and 3' OH Illumina/Solexa sequencing of adult liver, adult skin, oocytes stag...
ORGANISM(S): Xenopus (Silurana) tropicalis 
2009-07-09 | E-GEOD-14952 | biostudies-arrayexpress
ProteomicsRegulation of mRNA localization during the oocyte-to-embryo transition by regulated mRNA-endoplasmic reticulum association and remodeling of the endoplasmic reticulum
As an important post-transcriptional regulatory mechanism, asymmetric localization of mRNAs is essential for cell polarity and cell fate determination during early development. In an effort to understand localization of mRNAs encoding proteasome components during Xenopus oocyte-to-embryo transition,...
ORGANISM(S): Xenopus laevis (African clawed frog) 
2022-12-15 | PXD033018 | Pride
Xenopus laevis Microsome. oocyte maturation 
Sort   by:  
 Page size