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Unknown
(9206)
Proteomics
(2187)
Transcriptomics
(1390)
Genomics
(390)
Metabolomics
(121)
Other
(22)
Multiomics
(9)
Clinical
(2)
Models
(1)
Genomic
(1)
Methylation profiling
(1)
Organisms
Homo sapiens
(722)
Mus musculus
(292)
Saccharomyces cerevisiae
(65)
Drosophila melanogaster
(52)
Rattus norvegicus
(41)
Schizosaccharomyces pombe
(29)
Arabidopsis thaliana
(26)
Escherichia coli
(19)
Candida albicans
(16)
Carassius auratus
(14)
Sus scrofa
(14)
Caenorhabditis elegans
(13)
Zea mays
(12)
Bos taurus
(11)
Dictyostelium discoideum
(10)
Mycobacterium tuberculosis
(10)
Fagus sylvatica
(9)
Plasmodium falciparum
(9)
Gallus gallus
(9)
Saccharomyces cerevisiae SK1
(8)
Picea glauca
(7)
Aspergillus niger
(6)
Bombyx mori
(6)
Bacillus cereus
(6)
Vitis vinifera
(6)
Staphylococcus aureus
(6)
Moraxella catarrhalis
(5)
Cucumis sativus
(5)
Podospora anserina
(5)
Streptococcus pyogenes
(5)
Organisms
Homo sapiens
(112)
Neurospora crassa
(45)
Mus musculus
(45)
Saccharomyces cerevisiae
(12)
Yarrowia lipolytica
(9)
Drosophila melanogaster
(3)
Prochlorococcus marinus
(1)
Tylonycteris pachypus
(1)
Lysinibacillus xylanilyticus
(1)
Lonicera macranthoides
(1)
Gymnocypris eckloni
(1)
lung metagenome
(1)
Mus sp.
(1)
Xenopus laevis
(1)
mixed culture metagenome
(1)
Lactiplantibacillus pentosus
(1)
Schizosaccharomyces pombe
(1)
Pseudomonas aeruginosa
(1)
Danio rerio
(1)
Caenorhabditis elegans
(1)
Oncorhynchus mykiss
(1)
Macaca mulatta
(1)
Repository
pride
(1481)
biostudies-arrayexpress
(1332)
PeptideAtlas
(388)
ENA
(289)
MassIVE
(250)
geo
(163)
MetaboLights
(65)
GNPS
(56)
iProX
(54)
EGA
(20)
jPOST
(11)
NODE
(5)
PanoramaPublic
(4)
Cell Collective
(1)
dbGaP
(1)
EVA
(1)
PAXDB
(1)
Tissue
Cell culture
(250)
Others
(87)
Epithelial cell
(74)
Plant cell
(59)
Brain
(58)
Permanent cell line cell
(37)
Leaf
(33)
Liver
(30)
Whole body
(29)
Heart
(28)
Cell suspension culture
(28)
Fibroblast
(27)
Blood
(26)
Blood plasma
(25)
Root
(24)
Lung
(23)
Kidney
(20)
B cell
(14)
Blood cell
(14)
Photosynthetic cell
(13)
HeLa cell
(12)
Seedling
(11)
Embryonic stem cell
(11)
Urine
(11)
Skin
(11)
T cell
(10)
Kidney
(3)
Urine
(2)
Feces
(1)
Brain
(1)
Disease
Breast cancer
(37)
Disease free
(25)
Colon cancer
(12)
Wounds and Injuries
(12)
Brain cancer
(8)
Cardiovascular system disease
(7)
Non-small cell lung carcinoma
(6)
Normal
(5)
Rheumatoid arthritis
(4)
Cervical cancer
(3)
Colorectal adenocarcinoma
(2)
Invasive ductal carcinoma
(2)
Prostate cancer
(2)
Adenocaricinoma
(1)
Phyllodes tumor
(1)
Embryonic lethal at day 8.5 to 9.5
(1)
Infected
(1)
Small cell lung cancer
(1)
Slightly obese
(1)
Acute monoblastic leukaemia
(1)
Colorectal carcinoma
(1)
WT
(1)
Fibroadenoma
(1)
Eimeria maxima infected
(1)
Diabetes mellitus
(1)
Murine hereditary hemochromatosis
(1)
Hypertensive
(1)
Ischemic stroke NOS
(1)
Neoplasm Metastasis
(1)
Colorectal cancer
(1)
Technology Type
Mass Spectrometry
(1481)
Shotgun proteomics
(676)
Chemical cross-linking coupled with mass spectrometry proteomics
(324)
Bottom-up proteomics
(218)
Gel-based experiment
(178)
Affinity purification coupled with mass spectrometry proteomics
(170)
Data-dependent acquisition
(90)
Mass spectrometry
(60)
Top-down proteomics
(34)
SRM/MRM
(17)
Data-independent acquisition
(11)
MSE
(6)
Mass spectrometry assay
(5)
Affinity proteomics
(5)
SWATH MS
(5)
Mass spectrometry imaging
(4)
HDMSE
(4)
Gel-free quantification method
(3)
Proteogenomics
(2)
All-ion fragmentation
(2)
Illumina HiSeq 2500, Illumina HiSeq 2000
(1)
Gel-based quantification method
(1)
ITRAQ reagent
(1)
Immunopeptidomics
(1)
DiaPASEF
(1)
Instrument Platform
Ion Torrent S5 XL
(12)
Axon GenePix 4000B scanning hardware
(11)
Illumina NovaSeq 6000
(8)
Illumina HiSeq 2000
(8)
GenePix 4000B [Axon Instruments]
(7)
Illumina HiSeq 2500
(7)
ScanArray Lite [PerkinElmer]
(4)
GenePix Personal 4100A [Axon Instruments]
(4)
GenePix 4000A [Axon Instruments]
(4)
G2565AA DNA microarray scanner [Agilent]
(4)
454 GS FLX+
(3)
Other
(3)
G2565BA DNA microarray scanner [Agilent]
(3)
Illumina HiSeq 4000
(3)
DNA Microarray Scanner BA [Agilent Technologies]
(2)
Axon- GenePix4000B
(2)
Illumina Genome Analyzer II
(2)
NA
(2)
Ion Chef
(2)
NextSeq 500
(2)
Chromium Next GEM Single Cell 3ʹ Reagent Kits v3.1
(1)
Illumina HiSeq 2000 platform
(1)
Affymetrix GCS 3000
(1)
GeneChip® Pico Kit (Affymetrix)
(1)
Affymetrix Clariom™ S (400 Format)
(1)
Maxwell 16, Promega
(1)
HiScan, Illumina
(1)
IScan Illumina
(1)
Ion Chef™ System and Ion S5™ System or Ion GeneStudio™ S5 Systems.
(1)
ScanArrayExpress
(1)
Publication Date
2010
(323)
2013
(272)
2014
(233)
2022
(205)
2025
(201)
2023
(193)
2016
(192)
2015
(191)
2021
(187)
2024
(166)
2020
(166)
2019
(161)
2018
(154)
2012
(149)
2011
(149)
2026
(146)
2017
(126)
2008
(90)
2009
(80)
2007
(57)
2006
(24)
2004
(17)
2005
(13)
2003
(7)
UNIPROT ID/AC
NAP1_YEAST
(1)
ARI1_YEAST
(1)
RMT2_YEAST
(1)
YKT6_YEAST
(1)
EAF3_YEAST
(1)
ACON_YEAST
(1)
TPS2_YEAST
(1)
NLE1_YEAST
(1)
NAA25_YEAST
(1)
DRS1_YEAST
(1)
BET3_YEAST
(1)
DCP2_YEAST
(1)
RPA2_YEAST
(1)
DUG2_YEAST
(1)
PSA6_YEAST
(1)
DHYS_YEAST
(1)
SF3B1_YEAST
(1)
CDC53_YEAST
(1)
TYW1_YEAST
(1)
YP063_YEAST
(1)
MS116_YEAST
(1)
4932.YMR051C
(1)
ARO10_YEAST
(1)
MED4_YEAST
(1)
HSP7F_YEAST
(1)
PRS10_YEAST
(1)
VATA_YEAST
(1)
PDR5_YEAST
(1)
EF1A_YEAST
(1)
MSRA_YEAST
(1)
ENSEMBL ID
ENSG00000170477
(76)
ENSECAG00000021580
(30)
ENSECAG00000014414
(30)
ENSECAG00000011847
(30)
ENSECAG00000009556
(30)
ENSECAG00000004973
(30)
ENSECAG00000004960
(30)
ENSECAP00000013223
(29)
ENSECAP00000007368
(29)
ENSECAP00000003495
(29)
ENSECAG00000021499
(29)
ENSECAG00000019927
(29)
ENSECAG00000014858
(29)
ENSECAG00000006095
(29)
ENSECAG00000001810
(29)
ENSECAG00000009752
(28)
ENSECAG00000000207
(28)
ENSECAG00000010481
(27)
ENSECAG00000000548
(26)
ENSECAG00000004201
(25)
ENSECAP00000007504
(24)
ENSECAG00000016475
(24)
ENSECAG00000012096
(24)
ENSECAG00000019900
(23)
ENSECAG00000018949
(23)
ENSECAG00000015581
(23)
ENSECAG00000014222
(23)
ENSECAG00000014197
(23)
ENSECAG00000024571
(22)
ENSECAG00000021882
(22)
CHEBI ID
CHEBI:30769
(20)
CHEBI:15428
(17)
CHEBI:6650
(17)
CHEBI:15741
(16)
CHEBI:18012
(15)
CHEBI:16335
(15)
CHEBI:17992
(14)
CHEBI:33508
(14)
CHEBI:17268
(14)
CHEBI:15756
(14)
CHEBI:28044
(14)
CHEBI:16865
(13)
CHEBI:16704
(13)
CHEBI:26986
(13)
CHEBI:18237
(13)
CHEBI:28842
(12)
CHEBI:16750
(12)
CHEBI:27897
(12)
CHEBI:17822
(12)
CHEBI:22660
(12)
CHEBI:18300
(11)
CHEBI:26078
(11)
CHEBI:30915
(11)
CHEBI:17234
(11)
CHEBI:25017
(11)
CHEBI:17191
(10)
CHEBI:17351
(10)
CHEBI:28757
(10)
CHEBI:17148
(10)
CHEBI:24898
(10)
Metabolite Name
Adenosine
(14)
Phenylalanine
(11)
Glycine
(11)
Leucine
(10)
Methionine
(10)
Isoleucine
(10)
Adenine
(10)
Valine
(9)
Urea
(9)
Lysine
(9)
Proline
(9)
Ornithine
(9)
Uracil
(8)
L-Isoleucine
(8)
Guanosine
(8)
Betaine
(7)
Putrescine
(7)
Pantothenic acid
(7)
Glyceric acid
(7)
Malic acid
(7)
Asparagine
(7)
Tyrosine
(7)
Spermidine
(7)
Threonine
(7)
Glutamine
(7)
Hypoxanthine
(7)
L-Phenylalanine
(7)
Inosine
(7)
Uridine
(7)
Thymine
(6)
First Public Date
2019
(59)
2026
(35)
2025
(34)
2014
(29)
2024
(24)
2023
(20)
2022
(19)
2020
(18)
2021
(16)
2017
(10)
2016
(8)
2015
(7)
2013
(6)
2018
(4)
Classification
bacteria
(1)
Modification
15.994915
(20)
Not available
(20)
42.010565
(14)
57.021464
(14)
4-tetrahydrothiazine-3-carboxylic acid
(14)
-17.026549
(11)
4x(15)N labeled L-arginine
(10)
2x(15)N labeled L-lysine
(8)
45.029395
(5)
58.005479
(5)
-18.010565
(4)
N6-dimethyl-L-lysine
(4)
10.008269
(3)
79.966331
(3)
3x(2)H labeled N6-acetyl-L-lysine
(3)
144.102062
(2)
56.026215
(2)
45.987721
(2)
0.984016
(2)
4x(2)H labeled dimethylated residue
(2)
57.02146530151367
(1)
15.994915008544922
(1)
0.9840160012245178
(1)
47.036105
(1)
227.126991
(1)
9.030194
(1)
27.994915
(1)
144.105918
(1)
6.020129
(1)
59.036279
(1)
Study status
Not yet recruiting
(1)
Recruiting
(1)
Study type
Transcription profiling by array
(936)
Unknown experiment type
(97)
RNA-seq of coding RNA
(72)
Comparative genomic hybridization by array
(52)
ChIP-seq
(43)
Other
(22)
Methylation profiling by array
(22)
ChIP-chip by array
(21)
RNA-seq of non coding RNA
(13)
RNA-seq of coding RNA from single cells
(7)
ChIP-chip by tiling array
(5)
Proteomic profiling by array
(5)
Methylation profiling by high throughput sequencing
(5)
Genotyping by array
(4)
MicroRNA profiling by array
(4)
Cell line - High-throughput sequencing
(3)
RNA-seq of total RNA
(3)
Transcription profiling by RT-PCR
(2)
DNA-seq
(2)
Interventional
(2)
Transcription profiling by SAGE
(1)
Animal - High-throughput sequencing
(1)
RNAi profiling by array
(1)
MicroRNA profiling by high throughput sequencing
(1)
Genotyping by high throughput sequencing
(1)
Release Date
2022
(1030)
2021
(977)
2023
(844)
2025
(823)
2020
(767)
2024
(706)
2019
(624)
2018
(580)
2016
(566)
2017
(551)
2015
(463)
2010
(451)
2014
(430)
2013
(380)
2012
(318)
2011
(282)
2009
(195)
2008
(173)
2026
(108)
2007
(92)
2006
(57)
2005
(38)
2004
(36)
2003
(12)
2002
(8)
1999
(8)
2001
(6)
1997
(5)
2000
(4)
1998
(3)
Lab affiliation
Wageningen University
(13)
School of Life Sciences, University of Warwick
(9)
NARO Institute of Crop Science
(9)
CEA-Marcoule, DSV-Li2D, 30207 Bagnols-sur-Cèze, France
(9)
ETH Zurich, Institute of Molecular Systems Biology
(8)
Department of Biomedical Sciences, University of Padova, Italy
(8)
ETH Zurich
(8)
CEA-Marcoule, ProGénoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Cèze, France
(8)
CEA-Marcoule, DSV-iBEB-SBTN-LBSP, 30207 Bagnols-sur-Cèze, France
(6)
King's College London
(6)
JGU Mainz
(5)
Yale University, Department of Molecular Biophysics & Biochemistry
(4)
Department of Chemistry and Biotechnology, Graduate School of Engineering, University of Tokyo, Bunkyo-ku, Tokyo 113-8656, Japan.
(4)
School of Agriculture, Meiji University
(4)
Department of Life Science, National Taiwan University
(4)
Dept. of Biological Chemistry, Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem, Israel
(4)
The University of Melbourne
(4)
Chair of Proteomics and Bioanalytics Technical University of Munich Emil-Erlenmeyer-Forum 5 85354 Freising Germany
(3)
Human Technopole, 20157, Milan, Italy
(3)
chemistry and biomolecular science department
(3)
Medical Proteomics Unit, Office for Research and Development, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand
(3)
Cell Signalling
(3)
Department of Molecular Ecology MPI for Marine Microbiology Celsiusstr. 1 D-28359 Bremen Germany
(3)
Center for Theragnosis, Korea Institute of Science and Technology, Seoul, Korea
(3)
Biochemistry
(3)
University of Arizona, Department of Entomology
(3)
Evolutionary and translational venomics Lab, Instituto de Biomedicina de Valencia, CSIC
(3)
Institut für Mikrobiologie, Universität Greifswald, Felix-Hausdorff-Str. 8, 17489 Greifswald
(3)
Department of Genome Sciences, University of Washington, Seattle
(3)
Huangshan University
(3)
Location
China
(1)
Netherlands
(1)
Tags
xref:PubMed:42269081
(3)
xref:PubMed:23536725
(2)
xref:PubMed:30595435
(2)
xref:PubMed:34952892
(2)
xref:PubMed:31164146
(2)
xref:PubMed:39112713
(2)
xref:PubMed:22431510
(2)
xref:PubMed:37468473
(1)
xref:PubMed:39894894
(1)
xref:PubMed:30322927
(1)
xref:PubMed:23959540
(1)
xref:PubMed:40864222
(1)
xref:PubMed:24837367
(1)
xref:PubMed:30647404
(1)
xref:PubMed:28042144
(1)
xref:PubMed:40702552
(1)
xref:PubMed:26828195
(1)
xref:PubMed:37407818
(1)
xref:PubMed:41875157
(1)
xref:PubMed:27856324
(1)
xref:PubMed:34209035
(1)
xref:PubMed:27029610
(1)
xref:PubMed:32396934
(1)
xref:PubMed:41098095
(1)
xref:PubMed:20220117
(1)
xref:PubMed:17420462
(1)
xref:PubMed:32752193
(1)
xref:PubMed:37726310
(1)
xref:PubMed:19847166
(1)
xref:PubMed:37153590
(1)
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Lactiplantibacillus pentosus strain:XL
Lactiplantibacillus pentosus strain:XL Genome sequencing
PRJNA1476860
|
ENA
Cite
Neurospora crassa strain:XL-ADAT
Neurospora crassa XL-ADAT Gene Expression Profiling - XL-ADAT_2 transcriptome
PRJNA583844
|
ENA
Cite
Neurospora crassa strain:XL-ADAT
Neurospora crassa XL-ADAT Gene Expression Profiling - XL-ADAT_1 transcriptome
PRJNA583843
|
ENA
Cite
Neurospora crassa strain:XL-ADAT
Neurospora crassa XL-ADAT Gene Expression Profiling - XL-ADAT_3 transcriptome
PRJNA583845
|
ENA
Cite
Neurospora crassa strain:XL-ADAT-P_GCN4
Neurospora crassa XL-ADAT-P_GCN4 Gene Expression Profiling - XL-ADAT-P_GCN4_1 transcriptome
PRJNA583834
|
ENA
Cite
Neurospora crassa strain:XL-ADAT-P_GCN4
Neurospora crassa XL-ADAT-P_GCN4 Gene Expression Profiling - XL-ADAT-P_GCN4_2 transcriptome
PRJNA583835
|
ENA
Cite
Neurospora crassa strain:XL-ADAT-P_GCN4
Neurospora crassa XL-ADAT-P_GCN4 Gene Expression Profiling - XL-ADAT-P_GCN4_3 transcriptome
PRJNA583836
|
ENA
Cite
Neurospora crassa strain:XL-ADAT-W_GCN4
Neurospora crassa XL-ADAT-W_GCN4 Gene Expression Profiling - XL-ADAT-W_GCN4_2 transcriptome
PRJNA583838
|
ENA
Cite
Neurospora crassa strain:XL-ADAT-W_GCN4
Neurospora crassa XL-ADAT-W_GCN4 Gene Expression Profiling - XL-ADAT-W_GCN4_1 transcriptome
PRJNA583837
|
ENA
Cite
Neurospora crassa strain:XL-ADAT-W_GCN4
Neurospora crassa XL-ADAT-W_GCN4 Gene Expression Profiling - XL-ADAT-W_GCN4_3 transcriptome
PRJNA583839
|
ENA
Cite
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