Xu Wu W - OmicsDI

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Unknown (8794)
Proteomics (242)
Transcriptomics (83)
Genomics (39)
Metabolomics (30)
Multiomics (3)
Other (2)

Organisms

Allexis (145)
Arabidopsis thaliana (145)
Callinectes sapidus (145)
Danio rerio (145)
Homo sapiens (129)
Mus musculus (49)
Arabidopsis thaliana (7)
Ovis aries (3)
Rattus norvegicus (3)
Pseudomonas aeruginosa (2)
Drosophila melanogaster (2)
Oryza sativa (2)
Pseudomonas aeruginosa M18 (1)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (1)
Brassica oleracea (1)
Bemisia tabaci (1)
Staphylococcus epidermidis (1)
Oryza sativa Indica Group (1)
Oryza sativa Japonica Group (1)
Bos taurus (1)
Cricetulus griseus (1)
Mycolicibacterium smegmatis MC2 155 (1)
Oryctolagus cuniculus (1)
Pyricularia oryzae 70-15 (1)
Riemerella anatipestifer RA-YM (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Sus scrofa domesticus (1)
Trichuris sp. ex Homo sapiens JP-2011 (1)
Tropilaelaps mercedesae (1)
Zea mays (1)

Organisms

Mus musculus (1)

Repository

pride (145)
biostudies-arrayexpress (101)
iProX (85)
MetaboLights (29)
EGA (19)
MassIVE (7)
PeptideAtlas (5)
GPMDB (2)
geo (1)
GNPS (1)
ENA (1)

Tissue

Cell culture (40)
Epithelial cell (10)
Testis (10)
Liver (8)
Brain (7)
Whole body (6)
Blood cell (4)
Colon (4)
Leaf (4)
Stem cell (4)
Others (3)
Blood plasma (3)
Blood serum (3)
Hepatocyte (3)
Kidney (3)
Plant cell (3)
Sperm (3)
Male Reproductive System (2)
B cell (2)
Cerebrospinal fluid (2)
Embryo (2)
Heart (2)
Keratinocyte (2)
Lung (2)
Lymph node (2)
Macrophage (2)
Permanent cell line cell (2)
Renal cortical epithelial cell (2)
Root (2)
Skin (2)

Disease

Colon cancer (9)
Disease free (6)
Breast cancer (5)
Acute leukemia (4)
Malignant neoplasm of ovary (3)
Not Available (2)
Brain cancer (2)
Hepatocellular carcinoma (2)
Prostate adenocarcinoma (2)
Wounds and Injuries (2)
Alzheimer's disease (1)
Bacterial infectious disease (1)
Brain glioblastoma multiforme (1)
Cardiovascular system disease (1)
Cervix carcinoma (1)
Endometrial Endometrioid Adenocarcinoma (1)
Esophageal cancer (1)
Kidney cancer (1)
Liver cancer (1)
Liver cirrhosis (1)
Lung cancer (1)
Lung mixed small cell and squamous cell carcinoma (1)
Lymphoma (1)
Myeloproliferative neoplasm (1)
Neuropathic pain (1)
Non-alcoholic steatohepatitis (1)
Prostate cancer (1)
Renal cell carcinoma (1)
Severe acute respiratory syndrome (1)
Skin amelanotic melanoma (1)

Technology Type

Mass Spectrometry (145)
Shotgun proteomics (71)
Mass spectrometry (25)
Bottom-up proteomics (20)
Data-dependent acquisition (14)
Gel-based experiment (14)
Affinity purification coupled with mass spectrometry proteomics (9)
Top-down proteomics (8)
Data-independent acquisition (5)
SRM/MRM (4)
SWATH MS (4)
Mass spectrometry assay (3)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Affinity proteomics (2)
Immunopeptidomics (2)
Mass spectrometry imaging (2)
Olink affinity proteomics (2)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Proteogenomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (12)
Liquid Chromatography MS - positive - reverse phase (12)
Q Exactive HF (3)
Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - positive - hilic (3)
Orbitrap Fusion Lumos (2)
Instrument (2)
Liquid Chromatography MS - alternating - reverse phase (2)
Illumina Genome Analyzer IIx (1)
BGISEQ-500 (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
LTQ Orbitrap (1)
TripleTOF 5600 (1)
TripleTOF 6600 (1)
GC色Agilent 7890A, Agilent ,LECOChroma TOF PEGASUS HT, LECO (1)
Liquid Chromatography MS -neg - hilic (1)
Liquid Chromatography MS – pos - hilic (1)
Gas Chromatography MS - positive - medium polarity - Flame ionisation detector MS - positive (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Agilent 7890A+LECO Chroma TOF PEGASUS HT (1)
LTQ Orbitrap XL (Thermo Scientific) (1)
Liquid Chromatography MS - (1)
Bruker (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - positive - reverse-phase (1)

Publication Date

2025 (42)
2022 (42)
2024 (34)
2026 (32)
2023 (30)
2014 (26)
2021 (26)
2019 (26)
2015 (21)
2020 (21)
2016 (16)
2013 (14)
2012 (14)
2011 (10)
2010 (6)
2018 (5)
2009 (3)
2017 (3)
2008 (1)
2006 (1)
2005 (1)

UNIPROT ID/AC

A0A024R563 (5)
A0A024R8H9 (5)
A0A024RAN2 (5)
A0A024RC46 (5)
A0A087WVZ5 (5)
A0A087WXI0 (5)
A0A087X1S3 (5)
A0A0A0MS51 (5)
A0A0A0MSA7 (5)
A0A0C4DG89 (5)
A0AV96 (5)
A0AVT1 (5)
A0FGR8 (5)
A0FGR8-2 (5)
A0FGR8-6 (5)
A0MZ66 (5)
A0PJW6 (5)
A1L0T0 (5)
A1X283 (5)
A2BFH1 (5)
A2RRP1 (5)
A2RTX5 (5)
A3KN83 (5)
A4D110 (5)
A4D1P6 (5)
A4D1S5 (5)
A5A3E0 (5)
A5YKK6 (5)
A6NDG6 (5)
A6NDU8 (5)

ENSEMBL ID

ENSG00000170477 (5)
ENSG00000247315 (5)
ENSG00000147251 (4)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:17351 (12)
CHEBI:15354 (11)
CHEBI:17368 (11)
CHEBI:28875 (10)
CHEBI:16919 (10)
CHEBI:27897 (10)
CHEBI:17895 (10)
CHEBI:15756 (10)
CHEBI:16828 (10)
CHEBI:30769 (10)
CHEBI:30805 (9)
CHEBI:36274 (9)
CHEBI:16359 (9)
CHEBI:17405 (9)
CHEBI:18183 (9)
CHEBI:16040 (9)
CHEBI:15843 (9)
CHEBI:17568 (9)
CHEBI:15428 (9)
CHEBI:17596 (9)
CHEBI:28865 (9)
CHEBI:28716 (9)
CHEBI:18186 (8)
CHEBI:25017 (8)
CHEBI:28044 (8)
CHEBI:55328 (8)
CHEBI:28834 (8)
CHEBI:16411 (8)
CHEBI:24813 (8)
CHEBI:16704 (8)

Metabolite Name

Choline (7)
Cytosine (7)
L-Tryptophan (7)
Creatine (7)
Hypoxanthine (7)
Uracil (6)
Cholic acid (6)
L-Proline (6)
L-Arginine (6)
L-Lysine (6)
Uric acid (6)
Creatinine (6)
L-Methionine (6)
Leucine (5)
Glycine (5)
Pyroglutamic acid (5)
L-Histidine (5)
Deoxycholic acid (5)
Citric acid (5)
Fumaric acid (5)
Adenosine (5)
Linoleic acid (5)
Dodecanoic acid (5)
Adenine (5)
Hippuric acid (5)
L-Tyrosine (5)
D-Biotin (4)
Heptanoic acid (4)
Indoleacetic acid (4)
Phenylacetic acid (4)

First Public Date

2014 (1)

Modification

15.994915 (1)
57.021464 (1)
71.037114 (1)
Not available (1)

Study type

Transcription profiling by array (48)
RNA-seq of coding RNA (24)
ChIP-seq (10)
Methylation profiling by high throughput sequencing (9)
Comparative genomic hybridization by array (3)
Other (2)
RNA-seq of non coding RNA (2)
Transcription profiling by SAGE (1)
Methylation profiling by array (1)
RNA-seq of total RNA (1)

Release Date

2025 (1476)
2022 (1268)
2023 (1200)
2024 (1114)
2021 (916)
2020 (677)
2019 (459)
2018 (339)
2017 (300)
2016 (252)
2015 (222)
2026 (215)
2014 (158)
2013 (95)
2012 (73)
2011 (50)
2010 (31)
2009 (21)
2008 (10)
2005 (10)
2007 (5)
2006 (3)
2002 (1)

Lab affiliation

Zhejiang University (4)
BGI Research (3)
Northwest University (3)
Shenzhen Center for Disease Control and Prevention (3)
State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, Beijing Proteome Research Center, Beijing Institute of Radiation Medicine, Beijing 102206, China (3)
ETH Zurich (2)
Institute of Dermatology, Chinese Academy of Medical Sciences and Peking Union Medical College, 210042 Nanjing, China. (2)
Institute of Translational Medicine, Zhejiang University School of Medicine, Zhejiang University (2)
Key Lab of Integrated Crop Pest Management of Shandong, College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, China (2)
National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (2)
SJTU (2)
Shanghai Center for Systems Biomedicine, Key Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Jiao Tong University, Shanghai 200240, China (2)
Shanghai Jiao Tong University (2)
Soochow University (2)
St Jude Children's Research Hospital (2)
State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Engineering Research Center for Protein Drugs, National Center for Protein Sciences, Beijing Institute of Radiation Medicine, Beijing 102206, China (2)
The First Affiliated Hospital of Fujian Medical University (2)
Wenzhou Medical University (2)
1)Chongqing Medical University;2) Chongqing Key Laboratory of Translational Research for Cancer Metastasis and Individualized Treatment, Chongqing University Cancer Hospital (1)
1, Department of Biology, Institute of Molecular Systems Biology, ETH, Zurich, Switzerland 2, Faculty of Science, University of Zurich, Zurich, Switzerland (1)
1Center for Plant Biology, School of Life Sciences, Tsinghua University, Beijing, 100084, China. (1)
Anhui Medical University (1)
Anhui Province Key Laboratory of Medical Physics and Technology, Institute of Health and Medical Technology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, Anhui 230031, P. R. China University of Science and Technology of China, Hefei, Anhui 230026, P. R. China Hefei Cancer Hospital, Chinese Academy of Sciences, Hefei, Anhui 230031, P. R. China Precision Medicine Research Laboratory of Anhui Province, Hefei, Anhui 230088, P. R. China (1)
BGI-shenzhen (1)
Beijing Friendship Hospital, Capital Medical University (1)
Beijing proteome research center, Beijing, China (1)
Cancer Research Unit, Children’s Medical Research Institute, Faculty of Medicine and Health, The University of Sydney, Westmead NSW Australia (1)
Center for Cell Lineage and Development, CAS Key Laboratory of Regenerative Biology, Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, GIBH-HKU Guangdong-Hong Kong Stem Cell and Regenerative Medicine Research Centre, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, China. (1)
Children's Hospital, Zhejiang University School of Medicine, National Clinical Research Center for Child Health, Hangzhou, Zhejiang 310052, China (1)
Chinese Academy of Sciences (1)

Tags

xref:PubMed:22561152 (1)

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Gene expression profiles of MCF-7 cells treated with Si-Wu-Tang, estradiol and ferulic acid

Traditional Chinese medicines (TCM), usually composed of a mixture of components, may simultaneously target multiple genes/pathways and thus achieve superior efficacy for complex diseases such as cancer. To identify novel mechanisms of action and potential health benefits for a TCM formula Si-Wu-Tan...

ORGANISM(S): Homo sapiens

2011-05-18 | E-GEOD-23610 | biostudies-arrayexpress

Wu-5, a novel USP10 inhibitor, enhances crenolanib-induced FLT3-ITD-positive AML cell death via inhibiting FLT3 and AMPK pathways.

Not available

S-EPMC8115260 | biostudies-literature

Automated localization of mandibular landmarks in the construction of mandibular median sagittal plane.

Not available

S-EPMC10823719 | biostudies-literature

Differences of airborne and mural microorganisms in a 1,500-year-old Xu Xianxiu's Tomb, Taiyuan, China.

Not available

S-EPMC10635417 | biostudies-literature

TELP, a sensitive and versatile library construction method for next-generation sequencing

Next-generation sequencing has been widely used for the genome-wide profiling of histone modifications, transcription factor binding and gene expression through chromatin immunoprecipitated DNA sequencing (ChIP-seq) and cDNA sequencing (RNA-seq). Here, we describe a versatile library construction me...

ORGANISM(S): Mus musculus

2015-12-15 | E-GEOD-75966 | biostudies-arrayexpress

Detecting Key Functional Components Group and Speculating the Potential Mechanism of Xiao-Xu-Ming Decoction in Treating Stroke.

Not available

S-EPMC9136080 | biostudies-literature

Comparative transcriptomic analysis of normal and abnormal in vitro flowers in Cymbidium nanulum Y. S. Wu et S. C. Chen identifies differentially expressed genes and candidate genes involved in flower formation.

Not available

S-EPMC9638074 | biostudies-literature

[A molecular epidemiological study of KI polyomavirus and WU polyomavirus in children with acute respiratory infection in Tianjin, China].

Not available

S-EPMC7389920 | biostudies-literature

Effects of zirconium element on the microstructure and deuterium retention of W-Zr/Sc2O3 composites.