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UnknownGenome-wide transcriptome analysis of porcine epidemic diarrhea virus virulent or avirulent strain-infected porcine small intestinal epithelial cells.
Not available
S-EPMC8922430 | biostudies-literature
UnknownDiscovery of pentapeptide-inhibitor hits targeting FKBP51 by combining computational modeling and X-ray crystallography.
Not available
S-EPMC8329522 | biostudies-literature
TranscriptomicsTranscriptome Phase Distribution Analysis Reveals Diurnal Regulated Biological Processes and Key Pathways in Rice Flag Leaves and Seedling Leaves
Plant diurnal oscillation is a 24-hour period based variation. The correlation between diurnal genes and biological pathways was widely revealed by microarray analysis in different species. Rice (Oryza sativa) is the major food staple for about half of the world's population. The rice flag leaf is e...
ORGANISM(S): Oryza sativa 
2011-03-24 | E-GEOD-28124 | biostudies-arrayexpress
TranscriptomicsSmall RNAs in rice seed
Small RNAs are common and effective modulators of gene expression in eukaryotic organisms. To characterize the small RNAs expressed during rice seed development, massively parallel signature sequencing (MPSS) was performed, resulting in the obtainment of 22-nt sequence signatures. Through integrativ...
ORGANISM(S): Oryza sativa 
2009-02-02 | E-GEOD-11974 | biostudies-arrayexpress
TranscriptomicsEffect of Carbon Dioxide on Neonatal Mouse Lung: A Genomic Approach
Rationale: Despite the deleterious effects associated with elevated carbon dioxide (CO2), or hypercapnia, it has been hypothesized that CO2 can protect the lung from injury. However, the effects of chronic hypercapnia on the neonatal lung are unknown. Objectives: To determine whether chronic hyperca...
ORGANISM(S): Mus musculus 
2010-07-01 | E-GEOD-3161 | biostudies-arrayexpress
Transcriptomicsrat small intestine samples
Experiment description 1. Experimental design 1) Authors, laboratory, and contact: Xue-Lin Cui1, Patricia Soteropoulos2, Peter Tolias2, Ronaldo P. Ferraris1: 1Dept. of Pharmacology and Physiology, UMDNJ-New Jersey Medical School, Newark, NJ 07103-2714, 2Center for Applied Genomics, PHRI, 225 Warre...
ORGANISM(S): Rattus norvegicus 
2010-06-09 | E-GEOD-996 | biostudies-arrayexpress
TranscriptomicsExpression data from early rice endosperm
We used microarrays to detail the global programme of gene expression underlying cellularization and identified distinct classes of regulated genes during this process. Rice endosperm at 2 days after pollination(DAP) was selected for RNA extraction and hybridization on Affymetrix microarrays. We sou...
ORGANISM(S): Oryza sativa 
2015-09-01 | E-GEOD-57615 | biostudies-arrayexpress
TranscriptomicsDNA methylation dynamics during ex vivo differentiation and maturation of human dendritic cells
Genomewide DNA methylation profiling of monocyte isolated from humna blood, immature and mature dendritic cells generated ex vivo. The Illumina Infinium HumanMethylation450 beadchips were used to generate DNA methylation profiles. Bisulfite converted DNA were hybridized to the Illumina Infinium Huma...
ORGANISM(S): Homo sapiens 
2014-09-30 | E-GEOD-59796 | biostudies-arrayexpress
TranscriptomicsFunctional and Transcriptomic Characterization of iPSC-derived Macrophages and their Application in Modeling Mendelian Disease
Using RNA-Seq, we reported novel findings in the comparison of transcriptome profiles of isogenic HMDM and IPSDM during differentiation and polarization. First, IPSDM lost expression of pluripotency markers, had remarkably distinct gene expression profiles relative to precursor iPSCs, and had largel...
ORGANISM(S): Homo sapiens 
2015-07-08 | E-GEOD-55536 | biostudies-arrayexpress
UnknownFeasibility Analysis of Oxygen-Glucose Deprivation-Nutrition Resumption on H9c2 Cells In vitro Models of Myocardial Ischemia-Reperfusion Injury.
Not available
S-EPMC6166467 | biostudies-literature
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