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Transcriptomics
(338)
Genomics
(40)
Unknown
(8)
Proteomics
(7)
Multiomics
(2)
Organisms
Rattus norvegicus
(103)
Saccharomyces cerevisiae
(49)
Mus musculus
(40)
Chlamydomonas reinhardtii
(20)
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(16)
Homo sapiens
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(9)
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Escherichia coli str. K-12 substr. MG1655
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Escherichia coli BW38028
(1)
Sinorhizobium fredii NGR234
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Hebeloma cylindrosporum
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Campylobacter jejuni subsp. jejuni 81-176
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Mycolicibacterium sp. Y3
(1)
Halomonas sp. Y3
(1)
Citrobacter sp. Y3
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Actinobacteria bacterium Y3
(1)
Achromobacter mucicolens
(1)
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(1)
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Chryseobacterium intestini
(1)
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Xanthomonas oryzae pv. oryzae
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Pectobacterium brasiliense
(1)
Bacillus subtilis subsp. subtilis
(1)
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Pelagerythrobacter aerophilus
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Repository
biostudies-arrayexpress
(364)
ENA
(19)
MassIVE
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pride
(2)
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Mycelium
(2)
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(4)
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Squamous cell carcinoma has accession C0007137 in DiseaseStateDatabase NCI_Thesaurus
(1)
Photoreceptor degeneration
(1)
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(1)
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(20)
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(6)
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(6)
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(4)
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(2)
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(1)
Dell PowerEdge 630 with Intel Xeon E5-2630 processor (8 cores 16 threads) and 94 GB memory running CentOS Linux release 7.5.1804.
(1)
Infors HT Multitron shaker
(1)
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(1)
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(1)
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(1)
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(1)
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(1)
Illumina HiSeq 1500
(1)
Illumina HiSeq 3000
(1)
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(1)
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(1)
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2014
(52)
2013
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2010
(35)
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(32)
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2008
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(3)
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(2)
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(3)
2017
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(2)
2020
(2)
2026
(1)
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(1)
2019
(1)
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(1)
2014
(1)
Classification
bacteria
(6)
Study type
Transcription profiling by array
(207)
RNA-seq of coding RNA
(67)
ChIP-seq
(19)
ChIP-chip by array
(12)
RNA-seq of non coding RNA
(12)
Other
(9)
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(8)
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(4)
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(3)
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(3)
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(2)
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(2)
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(2)
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GRO-seq
(1)
CLIP-Seq
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Plant - High-throughput sequencing
(1)
Transcription profiling by tiling array
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CLIP-seq
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DNA-seq
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Methylation profiling by high throughput sequencing
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Release Date
2014
(54)
2013
(41)
2010
(35)
2012
(32)
2011
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2009
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2008
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2015
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(3)
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(3)
2020
(3)
Lab affiliation
UMR Institut Sophia Agrobiotech, INRAE 1355, CNRS and Université Côte d’Azur, 400, Route des Chappes, BP 167, 06903 Sophia Antipolis Cedex, France
(2)
Tags
pathogen:bacterium
(6)
pathogen
(6)
xref:PubMed:38843592
(1)
xref:PubMed:39360813
(1)
xref:EuropePMC:PMC5891468
(1)
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Citrobacter sp. Y3 strain:Y3
Citrobacter sp. Y3 strain:Y3 Genome sequencing
PRJNA611923
|
ENA
Cite
Actinobacteria bacterium Y3 strain:Y3
Actinobacteria bacterium Y3 strain:Y3 Raw sequence reads
PRJNA360887
|
ENA
Cite
Chryseobacterium intestini strain:Y3
Chryseobacterium intestini strain:Y3 Genome sequencing
PRJNA1209196
|
ENA
Cite
Mycolicibacterium sp. Y3 strain:Y3
Mycolicibacterium sp. Y3 strain:Y3 Genome sequencing
PRJNA975141
|
ENA
Cite
Halomonas sp. Y3 strain:Y3
Halomonas sp. Y3 strain:Y3 Genome sequencing
PRJNA852786
|
ENA
Cite
Kosakonia sacchari strain:Y3
Kosakonia sacchari strain:Y3 Genome sequencing and assembly
PRJNA634241
|
ENA
Cite
Bacillus sp. Y3 strain:Y3
Bacillus sp. Y3 strain:Y3 Genome sequencing and assembly
PRJNA561058
|
ENA
Cite
Klebsiella pneumoniae strain:Y3-10
Klebsiella pneumoniae strain:Y3-10 Genome sequencing
PRJNA596303
|
ENA
Cite
Bacillus subtilis subsp. subtilis strain:Y3
strain Y3 genome sequencing and assembly
PRJNA309052
|
ENA
Cite
Petroclostridium xylanilyticum strain:SK-Y3
Petroclostridium xylanilyticum strain:SK-Y3 Genome sequencing and assembly
PRJNA396427
|
ENA
Cite
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