Yang Dong D - OmicsDI

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Unknown (2525)
Proteomics (82)
Transcriptomics (66)
Metabolomics (20)
Genomics (6)

Organisms

Homo sapiens (54)
Methylocystis sp. (34)
Bothrops insularis (34)
Bothrops jararaca (34)
Bothrops jararacussu (34)
Bothrops cotiara (34)
Streptomyces coelicolor (34)
Pseudomonas aeruginosa PA103 (34)
Artibeus jamaicensis (34)
Mus musculus (29)
Ovis aries (3)
Zea mays (3)
Drosophila melanogaster (3)
Manihot esculenta (2)
Arabidopsis thaliana (2)
Tardigrada (2)
Macaca fascicularis fascicularis (2)
Brassica oleracea (1)
Capra hircus (1)
Bombyx mori (1)
Brassica napus (1)
Oryza sativa Indica Group (1)
Gallus gallus (1)
502593 (1)
Lamprigera yunnana (1)
Bacillus subtilis PY79 (1)
Glycyrrhiza uralensis (1)
Macaca mulatta (1)
Pseudomonas aeruginosa PAO1 (1)
Bos taurus (1)

Repository

biostudies-arrayexpress (70)
iProX (44)
pride (34)
MetaboLights (20)
MassIVE (4)
EGA (2)

Tissue

Cell culture (8)
Brain (5)
Liver (3)
Ovary (2)
Brain microvascular endothelial cell (1)
HESC cell (1)
Intestinal epithelial cell (1)
HEK-293 cell (1)
Peripheral blood mononuclear cell (1)
Electrically active cell (1)
Embryonic stem cell (1)
Plant cell (1)
Bone marrow (1)
Macrophage (1)
Heart (1)
Skeletal muscle (1)
Cell suspension culture (1)
Whole body (1)
Fibroblast (1)
Hepatocyte (1)
Lung (1)
Permanent cell line cell (1)

Disease

Normal (1)
Bacterial meningitis (1)
Primary immunodeficiency disease (1)
Melanoma (1)
Cardiovascular system disease (1)
Liver cancer (1)
Colon cancer (1)

Technology Type

Mass Spectrometry (34)
Mass spectrometry (18)
Shotgun proteomics (13)
Bottom-up proteomics (9)
Gel-based experiment (3)
Mass spectrometry assay (2)
Immunopeptidomics (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Mass spectrometry imaging (1)
Data-independent acquisition (1)
Data-dependent acquisition (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (12)
Liquid Chromatography MS - negative - reverse phase (12)
Illumina NovaSeq 6000 (7)
N/A (6)
Chromium Next GEM Single Cell Multiome ATAC + Gene Expression Reagent Bundle, (4)
10X Genomics reagent kit (3)
Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - positive - hilic (3)
10X Chromium Nuclei Isolation Kit (2)
6540 Q-TOF LC/MS (Agilent) (2)
Liquid Chromatography MS - (2)
Chromium Next GEM Single Cell Multiome Reagent Bundle (1)
10X Genomics reagents (1)
10X Chromium On-Chip Multiplex (1)
ScanArray Express HT [PerkinElmer] (1)
HiSeq X Ten (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 4000 (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
Q Exactive HF (1)
Q Exactive (1)
Q Exactive Plus (1)
MALDI MS (Imaging MS) (1)
LMJ-SSP/ESI MS (Imaging MS) (1)
Direct infusion MS - negative (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Gas Chromatography MS - positive (1)
Direct infusion MS - positive (1)

Publication Date

2014 (16)
2024 (15)
2010 (14)
2022 (13)
2026 (12)
2025 (12)
2021 (12)
2023 (12)
2015 (10)
2013 (9)
2012 (7)
2016 (5)
2020 (4)
2017 (3)
2011 (2)
2018 (2)
2007 (1)
2006 (1)
2019 (1)

CHEBI ID

CHEBI:15354 (9)
CHEBI:16610 (8)
CHEBI:6650 (8)
CHEBI:17154 (8)
CHEBI:17533 (7)
CHEBI:16708 (7)
CHEBI:16750 (7)
CHEBI:7916 (7)
CHEBI:17750 (7)
CHEBI:21547 (7)
CHEBI:16704 (7)
CHEBI:32816 (7)
CHEBI:16737 (7)
CHEBI:17596 (7)
CHEBI:17368 (7)
CHEBI:30769 (7)
CHEBI:28997 (6)
CHEBI:16450 (6)
CHEBI:18237 (6)
CHEBI:16040 (6)
CHEBI:15676 (6)
CHEBI:17015 (6)
CHEBI:37024 (6)
CHEBI:17929 (6)
CHEBI:16235 (6)
CHEBI:16467 (6)
CHEBI:15891 (6)
CHEBI:18107 (6)
CHEBI:17964 (6)
CHEBI:16027 (6)

Metabolite Name

Creatinine (5)
Pyruvic acid (4)
CDP (4)
4-Pyridoxic acid (4)
DCMP (4)
Xanthurenic acid (4)
L-Arginine (4)
Methionine sulfoxide (4)
Xanthosine (4)
Arachidonic acid (4)
Citric acid (4)
Spermidine (4)
Adenine (4)
Uric acid (4)
Cytidine (4)
Guanosine (4)
Hypoxanthine (4)
Carbamoyl phosphate (3)
Ciprofloxacin (3)
Geranyl-PP (3)
DCDP (3)
DTDP (3)
Galactitol (3)
3-Methylindole (3)
Oxoglutaric acid (3)
Taurodeoxycholic acid (3)
Carnitine (3)
Cellobiose (3)
Nicotinamide ribotide (3)
Niacinamide (3)

Study type

Transcription profiling by array (39)
RNA-seq of coding RNA (14)
Single nucleus RNA sequencing (4)
Other (3)
Methylation profiling by high throughput sequencing (3)
Unknown experiment type (2)
RNA-seq of coding RNA from single cells (2)
ScATAC-seq (1)
ChIP-seq (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (406)
2022 (360)
2023 (331)
2024 (316)
2021 (260)
2020 (191)
2019 (148)
2018 (97)
2017 (95)
2016 (76)
2015 (75)
2014 (60)
2026 (58)
2013 (37)
2012 (24)
2010 (21)
2011 (17)
2008 (7)
2009 (5)
2007 (3)
2006 (2)
2004 (2)
2005 (1)
2003 (1)
2002 (1)

Lab affiliation

Institute of Translational Medicine, Zhejiang University School of Medicine, Zhejiang University (2)
State Key Lab of Reproductive Medicine, Nanjing Medical University (2)
Hubei University of Medicine, Taihe Hospital (2)
Translational Medical Center for Stem Cell Therapy and Institute for Regenerative Medicine, Medical Innovation Center and State Key Laboratory of Cardiology, Shanghai East Hospital, Clinical and Translational Research Center of Shanghai First Maternity & Infant Hospital, Frontier Science Center for Stem Cell Research, School of Life Sciences and Technology, Sports and Health Research Center, Tongji University Department of Physical Education, Tongji University, Shanghai 200092, China (1)
GIBH (1)
R&D Center for Clinical Mass Spectrometry, Seegene Medical Foundation, Seongdong-gu, Seoul, Republic of Korea. (1)
College of Horticulture, China Agricultural University, Beijing, China (1)
Tianjin First Central Hospital Clinic Institute, Tianjin Medical University, Tianjin, 300070, P.R. China (1)
Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University, Guangzhou, China (1)
National Yang-Ming University Proteomics Research Center (R648), Taipei, 112 Taiwan (ROC) (1)
Translational Biomedical Proteomics, Institute of Molecular and Cell Biology (IMCB), Singapore (1)
Key Laboratory for Experimental Teratology of the Ministry of Education, Advanced Medical Research Institute, Qilu Hospital, Cheeloo College of Medicine, Shandong University (1)
Department of Liver Surgery and Transplantation, Liver Cancer Institute, Zhongshan Hospital, Fudan University; Key Laboratory of Carcinogenesis and Cancer Invasion of Ministry of Education, Key Laboratory of Medical Epigenetics and Metabolism, Institutes of Biomedical Sciences, Fudan University, Shanghai 200032, China (1)
Laboratory of Vaccine and Antibody Engineering, Beijing Institute of Biotechnology, Beijing, China (1)
The First Affiliated Hospital of Sun Yat-sen university (1)
Medical College of Xiamen University (1)
National Institute of Biological Sciences, Beijing, Beijing, China. (1)
State Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan, Hubei, China (1)
Professor and Deputy Director, Center for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to be University), University Road, Deralakatte, Mangalore 575018, India (1)
Taihe Hospital, Hubei University of Medicine, Shiyan 442000, Hubei, China (1)
Institute of Systems Biomedicine Peking University Health Science Center Beijing 100191, P.R. China (1)
Department of Respiratory, Shandong Provincial Qianfoshan Hospital, Cheeloo College of Medicine, Shandong University, Jinan, China. Department of Respiratory, The First Affiliated Hospital of Shandong First Medical University & Shandong Provincial Qianfoshan Hospital, Shandong Institute of Respiratory Diseases. (1)
The First Affiliated Hospital, Jinan University, Guangzhou, China. (1)
Department of Medicine, Columbia University Irving Medical Center (1)
Associate Professor (1)
National Yang-Ming University Proteomics Research Center,Taiwan (1)
huazhong agriculture university (1)
Hubei University of Technology (1)
Zhejiang University (1)
Department of Molecular Immunology, Institute of Basic Medical Sciences (1)

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Comprehensive analyses of genetic diversities and population structure of the Guizhou Dong group based on 44 Y-markers.

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S-EPMC10538297 | biostudies-literature

Evaluation of anthropometric indices as a predictor of diabetes in Dong and Miao ethnicities in China: A cross-sectional analysis of China Multi-Ethnic Cohort Study.

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Forensic Features and Population Genetic Structure of Dong, Yi, Han, and Chuanqing Human Populations in Southwest China Inferred From Insertion/Deletion Markers.

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PHSP-Net: Personalized Habitat-Aware Deep Learning for Multi-Center Glioblastoma Survival Prediction Using Multiparametric MRI.

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S-EPMC12467337 | biostudies-literature

Facilitation of MrgprD by TRP-A1 promotes neuropathic pain.

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S-EPMC6988841 | biostudies-literature

Myeloid PFKFB3-mediated glycolysis promotes kidney fibrosis

Excessive renal fibrosis is a common pathology in progressive chronic kidney diseases. Inflammatory injury and aberrant repair processes contribute to the development of kidney fibrosis. Myeloid cells, particularly monocytes/macrophages, play a crucial role in kidney fibrosis by releasing their proi...

2024-03-12 | MTBLS8278 | MetaboLights

Molecular and Functional Characterization of the role of RNA silencing components in Cryptococcus neoformans [RNAi_Serotype D]

The RNA interference (RNAi) mediated by homology-dependent degradation of the target mRNA with small RNA molecules plays a key role in controlling transcription and translation processes in a number of eukaryotic organisms. The RNAi machinery is also evolutionarily conserved in a wide variety of fun...

ORGANISM(S): Cryptococcus neoformans var. neoformans JEC21

2010-05-01 | E-GEOD-21177 | biostudies-arrayexpress

Exploring synergistic effects of Achyranthes bidentata Blume and Paeonia lactiflora Pall. on hypertension with liver yang hyperactivity using the multidisciplinary integrative strategy.

Not available

S-EPMC11550124 | biostudies-literature

Pathogenic roles of alterations in vitamin D and vitamin D receptor in gastric tumorigenesis.

Not available

S-EPMC5438745 | biostudies-literature

D-1553: A novel KRAS^G12C inhibitor with potent and selective cellular and in vivo antitumor activity.

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S-EPMC10323112 | biostudies-literature