Yang J-Y JY - OmicsDI

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Unknown (822)
Proteomics (20)
Genomics (17)
Metabolomics (11)
Transcriptomics (7)

Organisms

Homo sapiens (28)
Andropogon gerardi (8)
Bacteria (8)
Canis lupus familiaris (8)
Clostridium perfringens (8)
Cnidaria (8)
Cricetulus griseus (8)
Eukaryota (8)
Fasciola (8)
Hepatitis B virus (8)
Human betaherpesvirus 5 (8)
Madurella mycetomatis (8)
Mesocricetus auratus (8)
Miscanthus x giganteus (8)
Mus musculus (8)
Mycobacterium tuberculosis (8)
Orthoflavivirus (8)
Panicum virgatum (8)
Platyhelminthes (8)
Pseudomonas aeruginosa AES-1R (8)
Rattus norvegicus (8)
Saccharomyces cerevisiae (8)
Schizosaccharomyces pombe (8)
Severe acute respiratory syndrome coronavirus 2 (8)
Shigella (8)
Sorghastrum nutans (8)
Mus musculus (4)
Macaca mulatta (1)
Gallus gallus (1)
Severe acute respiratory syndrome coronavirus 2 (1)

Repository

EGA (16)
iProX (11)
MetaboLights (11)
biostudies-arrayexpress (8)
pride (8)
MassIVE (1)

Tissue

Brain (3)
Cell culture (2)
Blood plasma (1)
Blood serum (1)
Epithelial cell (1)
Fat body (1)

Disease

Disease free (1)

Technology Type

Mass spectrometry (10)
Mass Spectrometry (8)
Shotgun proteomics (5)
Top-down proteomics (2)
Mass spectrometry assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Gel-based experiment (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (7)
LTQ Orbitrap Velos (1)
Q Exactive (1)
MALDI MS (Imaging MS) (1)
LMJ-SSP/ESI MS (Imaging MS) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2023 (8)
2022 (7)
2012 (4)
2010 (3)
2024 (3)
2025 (2)
2019 (2)
2018 (2)
2021 (2)
2011 (1)

CHEBI ID

CHEBI:35038 (3)
CHEBI:16359 (3)
CHEBI:116314 (3)
CHEBI:34687 (3)
CHEBI:28865 (3)
CHEBI:64563 (3)
CHEBI:195271 (2)
CHEBI:143757 (2)
CHEBI:143745 (2)
CHEBI:182784 (2)
CHEBI:173703 (2)
CHEBI:44526 (2)
CHEBI:28104 (2)
CHEBI:139138 (2)
CHEBI:10136 (2)
CHEBI:73858 (2)
CHEBI:34494 (2)
CHEBI:16610 (2)
CHEBI:17154 (2)
CHEBI:64489 (2)
CHEBI:75542 (2)
CHEBI:80774 (2)
CHEBI:16755 (2)
CHEBI:49168 (2)
CHEBI:17748 (2)
CHEBI:16235 (2)
CHEBI:75342 (2)
CHEBI:7916 (2)
CHEBI:16708 (2)
CHEBI:28997 (2)

Metabolite Name

Tris(2-butoxyethyl) phosphate (3)
Cholic acid (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
Lyso-PC(16:0) (2)
Dibutyl phthalate (DBP) (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
Chenodeoxycholic acid (2)
Guanine (2)
Taurocholic acid (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
DL-Dopa (2)
Spermidine (2)
Monoolein (2)
Elaidic acid (2)
9(10)-EpOME (2)
Adenine (2)
Deoxyinosine (2)
Myristoleic acid (2)
Thymidine (2)
Hypoxanthine (2)
NCGC00168953-02_C47H76O17_(3beta,5xi,9xi,22beta)-22,24-Dihydroxyolean-12-en-3-yl 6-deoxy-alpha-L-mannopyranosyl-(1->2)-alpha-L-arabinopyranosyl-(1->2)-beta-D-glucopyranosiduronic acid (1)
Sodium taurochenodeoxycholate (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
Lyso PC (22:6) (1)
Methyl (3R,4R,5R)-5-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(E)-3-phenylprop-2-enoyl]oxyoxan-2-yl]oxy-3,4-dihydroxycyclohexene-1-carboxylate (1)
Propanoic acid, 3,3'-thiobis-, didodecyl ester (1)

Study type

Transcription profiling by array (4)
ChIP-chip by array (1)
Comparative genomic hybridization by array (1)
ChIP-seq (1)
RNA-seq of coding RNA (1)

Release Date

2021 (108)
2025 (96)
2020 (94)
2022 (85)
2023 (84)
2024 (76)
2016 (50)
2018 (44)
2019 (43)
2015 (33)
2014 (27)
2017 (26)
2012 (20)
2013 (13)
2026 (12)
2011 (10)
2010 (7)
2009 (1)
2005 (1)

Lab affiliation

Korea Basic Science Institute (2)
2Department of Biological Sciences, Korea Advanced Institute for Science and Technology (KAIST) (1)
Center for Theragnosis, Korea Institute of Science and Technology, Seoul, Korea (1)
Department of Biological Sciences, Korea Advanced Institute for Science and Technology (KAIST) (1)
Department of Molecular Sciences, Macquarie University, Sydney, NSW, Australia; Biomolecular Discovery Research Centre, Macquarie University, Sydney, NSW, Australia (1)
Jiangxi Province Key Laboratory of Laboratory Medicine, Department of Clinical Laboratory, The Second Affiliated Hospital of Nanchang University, Nanchang, China. (1)
School of Chinese Medicine, Hong Kong Baptist University (1)

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Additional Role of Nicotinic Acid Hydroxylase for the Transformation of 3-Succinoyl-Pyridine by Pseudomonas sp. Strain JY-Q.

Not available

S-EPMC8105005 | biostudies-literature

Differential Effects of Homologous Transcriptional Regulators NicR2A, NicR2B1, and NicR2B2 and Endogenous Ectopic Strong Promoters on Nicotine Metabolism in Pseudomonas sp. Strain JY-Q.

Not available

S-EPMC7848913 | biostudies-literature

Sleep efficiency in community-dwelling persons living with dementia: exploratory analysis using machine learning.

Not available

S-EPMC11789254 | biostudies-literature

Comparative Transcriptome Analysis between Two Potato Cultivars in Tuber Induction to Reveal Associated Genes with Anthocyanin Accumulation.

Not available

S-EPMC8998591 | biostudies-literature

Alcohol Drinking Obliterates the Inverse Association Between Serum Retinol and Risk of Head and Neck Cancer.

Not available

S-EPMC4504644 | biostudies-literature

The Mediator MED23 plays opposing roles in directing smooth muscle cell and adipocyte differentiation

The Mediator complex functions as a control center orchestrating diverse signalings, gene activities, and biological processes. However, how Mediator subunits determine distinct cell fates remains to be fully elucidated. Here, we show that Mediator MED23 controls the cell fate preference that direct...

ORGANISM(S): Mus musculus

2012-12-20 | E-GEOD-40369 | biostudies-arrayexpress

Risk of Tuberculosis Among Patients on Dialysis: The Predictive Value of Serial Interferon-Gamma Release Assay.

Not available

S-EPMC4900731 | biostudies-literature

Comparative metabolomic analysis of exudates of microcystin-producing and microcystin-free Microcystis aeruginosa strains

Cyanobacterial harmful algal blooms (cHABs) dominated by Microcystis aeruginosa threaten the ecological integrity and beneficial uses of lakes globally. In addition to producing hepatotoxic microcystins (MC), M. aeruginosa exudates (MaE) contain various compounds with demonstrat...

2023-01-16 | MTBLS6603 | MetaboLights

Latent Tuberculosis Infection and the Risk of Subsequent Cancer.

Not available

S-EPMC5291550 | biostudies-literature

Triglyceride to high-density lipoprotein cholesterol ratio predicts cardiovascular outcomes in prevalent dialysis patients.

Not available

S-EPMC4602469 | biostudies-literature