Yang Ji J - OmicsDI

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Unknown (3362)
Proteomics (90)
Transcriptomics (40)
Metabolomics (14)
Genomics (13)
Multiomics (1)

Organisms

Homo sapiens (62)
Aerococcus urinae NBRC 15544 = CCUG 36881 (52)
Alteromonadales (52)
Bacteria (52)
Canis lupus familiaris (52)
Carya cathayensis (52)
Cnidaria (52)
Ectopseudomonas oleovorans CECT 5344 (52)
Ensifer adhaerens (52)
Enterococcus faecalis (52)
Globicatella sanguinis (52)
Halictus scabiosae (52)
Histomonas meleagridis (52)
Human immunodeficiency virus 1 (52)
Mesocricetus auratus (52)
Methylohalobius crimeensis 10Ki (52)
Mus musculus (52)
Ophrys garganica (52)
Ophrys sphegodes (52)
Pseudomonas aeruginosa SJTD-1 (52)
Mus musculus (19)
Citrobacter rodentium (2)
Rattus rattus (2)
Equus caballus (1)
Streptomyces coelicolor (1)
Zea mays (1)
Drosophila melanogaster (1)
Arabidopsis thaliana (1)
Escherichia coli (1)
Halobacterium salinarum NRC-1 (1)

Repository

pride (52)
biostudies-arrayexpress (40)
iProX (34)
MetaboLights (14)
EGA (13)
MassIVE (3)
PeptideAtlas (1)

Tissue

Cell culture (19)
Early embryonic cell (7)
Brain (3)
Stem cell (3)
B cell (2)
Cell line cell (2)
Cell suspension culture (2)
Chondrocyte (2)
Liver (2)
Pancreas (2)
T cell (2)
Testis (2)
Bladder cell (1)
Blood cell (1)
Blood plasma (1)
Blood serum (1)
Cerebellum (1)
Colon (1)
Embryo (1)
Gill (1)
HeLa cell (1)
Hepatocyte (1)
Kidney (1)
Leaf (1)
Mammary epithelium (1)
Motoneuron (1)
Placenta (1)
Plant cell (1)
Primary cell (1)
T-cell acute lymphoblastic leukemia cell (1)

Disease

Disease free (5)
Acute leukemia (1)
Aortic dissection (1)
Brain glioblastoma multiforme (1)
Cardiovascular system disease (1)
Colonic disease (1)
Diffuse large B-cell lymphoma (1)
Liver cancer (1)
Malignant neoplasm of ovary (1)
Night blindness (1)
Urinary bladder cancer (1)

Technology Type

Mass Spectrometry (52)
Shotgun proteomics (23)
Mass spectrometry (12)
Data-dependent acquisition (10)
Bottom-up proteomics (9)
Gel-based experiment (7)
Affinity purification coupled with mass spectrometry proteomics (5)
Data-independent acquisition (5)
SWATH MS (4)
Proteogenomics (2)
SRM/MRM (2)
Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Mass spectrometry assay (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Immunopeptidomics (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (7)
Liquid Chromatography MS - negative - reverse phase (6)
Liquid Chromatography MS - alternating - hilic (2)
NextSeq 2000 (1)
LTQ Orbitrap Elite (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
Orbitrap Fusion Lumos (1)
Quattro micro API (Waters) (1)
Varian (1)
7000C Triple Quadrupole GC/MS (Agilent) (1)
Flame ionisation detector MS - (1)
Agilent 5975E GC/MSD (Agilent) (1)
Gas Chromatography MS - (1)
Bruker (1)
API 4000 QTRAP (AB Sciex) (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
Unknown (1)

Publication Date

2025 (20)
2023 (20)
2024 (18)
2022 (16)
2021 (12)
2013 (8)
2015 (7)
2011 (7)
2019 (7)
2020 (4)
2014 (3)
2012 (3)
2010 (3)
2006 (3)
2026 (3)
2007 (2)
2017 (2)
2016 (1)
2009 (1)
2008 (1)
2005 (1)
2002 (1)
2018 (1)

CHEBI ID

CHEBI:17596 (8)
CHEBI:15354 (7)
CHEBI:17368 (7)
CHEBI:17821 (6)
CHEBI:16750 (6)
CHEBI:15428 (6)
CHEBI:17154 (6)
CHEBI:16919 (6)
CHEBI:17895 (6)
CHEBI:17295 (6)
CHEBI:15756 (6)
CHEBI:55328 (5)
CHEBI:15891 (5)
CHEBI:18132 (5)
CHEBI:16856 (5)
CHEBI:16040 (5)
CHEBI:17568 (5)
CHEBI:15741 (5)
CHEBI:17203 (5)
CHEBI:16467 (5)
CHEBI:18012 (5)
CHEBI:16027 (5)
CHEBI:16335 (5)
CHEBI:64563 (5)
CHEBI:30769 (5)
CHEBI:46961 (4)
CHEBI:64566 (4)
CHEBI:18186 (4)
CHEBI:16811 (4)
CHEBI:17234 (4)

Metabolite Name

Hoslundal (2)
Phyllospadine (2)
Threonate (2)
4-formyl Indole (2)
(S)-(-)-Perillyl alcohol (2)
Dehydroascorbic Acid (2)
D-Fructose (2)
2,5-Dimethylbenzaldehyde (2)
Pentadecanoyl-EA (2)
C17 Sphinganine (2)
C16 Sphinganine (2)
Thymine (2)
Nicotinamide (2)
Inosine (2)
Hypoxanthine (2)
Glutamate (2)
Creatine (2)
Glycerol (2)
Glycine (2)
Succinic acid (2)
Fumaric acid (2)
Cellobiose (2)
Sphingosine (2)
Mannitol (2)
Phytosphingosine (2)
L-cysteine (2)
LPE 18:2 (2)
Choline (2)
Taurine (2)
UDP-N-acetyl-alpha-D-glucosamine (2)

Study type

Transcription profiling by array (28)
RNA-seq of coding RNA (5)
Comparative genomic hybridization by array (2)
Unknown experiment type (1)
ChIP-chip by tiling array (1)
Transcription profiling by RT-PCR (1)
Methylation profiling by array (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (536)
2022 (499)
2023 (410)
2024 (407)
2021 (340)
2020 (247)
2019 (166)
2018 (162)
2017 (115)
2015 (113)
2016 (109)
2026 (78)
2014 (54)
2013 (50)
2011 (33)
2012 (29)
2010 (13)
2009 (11)
2008 (10)
2007 (6)
2006 (4)
2005 (4)
2003 (3)
2002 (1)
2004 (1)
2001 (1)

Lab affiliation

Department of Orthopedic Surgery, Sir Run Run Shaw Hospital, Medical College of Zhejiang University, Hangzhou City, China. (3)
Beijing Key Laboratory of Protein Posttranslational Modifications and Cell Function, Department of Biochemistry and Biophysics, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, 100191, China. (2)
Molecular Biology and the Lewis-Sigler Institute for Integrative Genomics, Princeton University, USA (2)
Professor and Chair of Chemical Biology, Peking-Tsinghua Center for Life Sciences Peking University, Beijing, China. Associate Editor, ACS Chemical Biology (2)
Professor and Chair of Chemical Biology, Peking-Tsinghua Center for Life Sciences Peking University, Beijing, China. Executive Editor, ACS Chemical Biology (2)
Shandong University (2)
1 Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, PR China 2 Department of Microbiology and Immunology, Tongji University School of Medicine, Shanghai 200049, PR China 3 Clinical Translation Research Center, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, China. (1)
1. Laboratory of Protein and Peptide Pharmaceuticals & Laboratory of Proteomics, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China 2. University of Chinese Academy of Sciences, Beijing 100049, China (1)
1Peking-Tsinghua Center for Life Sciences, Peking University, Beijing 100871, China 2Academy of Advanced Interdisciplinary Studies, Peking University, Beijing 100871, China 3Synthetic and Functional Biomolecules Center, Beijing National Laboratory for Molecular Sciences, Key Laboratory of Bioorganic Chemistry and Molecular Engineering of Ministry of Education, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China (1)
Bioanalytical Mass Spectrometry Group,Max-Planck-Institute for Multidisciplinary Sciences,Goettingen, Germany (1)
Department of Biology, Brain Research Center, Southern University of Science and Technology (1)
Department of Chemistry and Center for ProteoGenome Research, Korea University, Seoul 02841, Republic of Korea (1)
Department of Clinic Laboratory, Shanghai Children’s Medical Center, School of Medicine, Shanghai Jiao Tong University, Shanghai, China (1)
Department of Clinical Laboratory, Shanghai Children’s Medical Center, School of Medicine, Shanghai Jiao Tong University (1)
Department of Orthopedic Surgery, Sir Run Run Shaw Hospital, Medical College of Zhejiang University, Hangzhou City, China (1)
Engineering Research Center of Agricultural Microbiology Technology, Ministry of Education, Heilongjiang University, Harbin 150500, China (1)
Guangdong Institute of Cardiovascular Diseases (1)
Henan Institute of Medical and Pharmaceutical Sciences, Zhengzhou University (1)
Henan University of Science and Technology,College of Clinical Medicine,Luoyang, China, (1)
Institute of Chinese Materia Medica, China Academy of Chinese Medical Sciences (1)
Institute of Oceanology, Chinese Academy of Sciences (1)
Institute of Pediatric Research, Children's Hospital of Soochow University, Suzhou, China. (1)
JNU university (1)
Key Laboratory of Imaging Diagnosis and Minimally Invasive Intervention Research, Fifth Affiliated Hospital of Wenzhou Medical University, Lishui 323000, China (1)
Leibniz Institute on Aging - Fritz Lipmann Institute FLI (1)
Lymphoid Malignancies Branch Center for Cancer Research National Cancer Institute National Institutes of Health Bethesda, Maryland (1)
Max-Planck of Biochemistry, Experimental Systems Immunology Germany (1)
Molecular Biology and Lewis-Sigler Institute for Intergrative Genomics, Princeton University, USA (1)
Nanjing Medical University (1)
Ning Lab, Life Science Division of HKUST， China (1)