Yang Zheng Z - OmicsDI

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Unknown (5610)
Proteomics (149)
Metabolomics (34)
Transcriptomics (30)
Genomics (14)
Multiomics (3)
Models (1)

Organisms

Allexis (80)
Arabidopsis thaliana (80)
Entamoeba histolytica HM-1:IMSS-A (80)
Escherichia coli (80)
Homo sapiens (61)
Mus musculus (20)
Arabidopsis thaliana (4)
synthetic construct (2)
Manihot esculenta (2)
Rattus norvegicus (2)
Tardigrada (2)
Nannospalax galili (1)
Dirofilaria immitis (1)
Zea mays (1)
Setaria italica (1)
Drosophila melanogaster (1)
Danio rerio (1)
Bombyx mori (1)
Candida albicans (1)
Enterococcus faecalis (1)
Fasciola hepatica (1)
Lycium barbarum (1)
Macaca fascicularis fascicularis (1)
Macrothele (1)
Mus (1)
Oryctolagus cuniculus (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Talaromyces marneffei (1)
Trichonephila (1)
unclassified Sparassidae (1)

Organisms

Homo sapiens (1)

Repository

pride (80)
iProX (65)
MetaboLights (34)
biostudies-arrayexpress (33)
EGA (8)
PeptideAtlas (3)
ENA (2)
BioModels (1)
geo (1)
MassIVE (1)

Tissue

Cell culture (24)
Epithelial cell (9)
Brain (5)
Liver (5)
Hepatocyte (4)
Lung (4)
Others (3)
Colon (3)
Testis (3)
Endothelial cell (2)
Fibroblast (2)
Permanent cell line cell (2)
Plant cell (2)
Rosette (2)
Stem cell (2)
Whole body (2)
Adipose tissue (1)
Blood (1)
Blood plasma (1)
Blood serum (1)
Bone marrow (1)
Bone matrix (1)
Dendritic cell (1)
Erythrocyte (1)
Flower (1)
Heart (1)
Hippocampal neuron (1)
Intestinal epithelial cell (1)
Kidney (1)
Kidney cell (1)

Disease

Disease free (5)
Colon cancer (2)
Acute leukemia (1)
Adult hepatocellular carcinoma (1)
Alzheimer's disease (1)
Colorectal cancer (1)
Gastric adenocarcinoma (1)
Kidney cancer (1)
Lung cancer (1)
Lung carcinoma (1)
Mastitis (1)
Metabolic dysfunction-associated steatotic liver disease (1)
Non-alcoholic steatohepatitis (1)
Plasmodium falciparum malaria (1)
Primary ovarian insufficiency (1)
Type 1 diabetes mellitus (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (80)
Shotgun proteomics (39)
Mass spectrometry (33)
Bottom-up proteomics (12)
Data-dependent acquisition (10)
Gel-based experiment (7)
Affinity purification coupled with mass spectrometry proteomics (5)
Data-independent acquisition (4)
Top-down proteomics (4)
NMR spectroscopy (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
SWATH MS (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
Glycoproteomics (1)
MSE (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (16)
Liquid Chromatography MS - positive - reverse phase (16)
Liquid Chromatography MS - negative - hilic (5)
Liquid Chromatography MS - negative (3)
Liquid Chromatography MS - positive (3)
Liquid Chromatography MS - positive - hilic (3)
Liquid Chromatography MS - (2)
LTQ Orbitrap Elite (2)
Illumina NovaSeq X (1)
Illumina NovaSeq 6000 (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
Liquid Chromatography MS - Negative (LC-MS (NEG)) (1)
Liquid Chromatography MS - Positive (LC-MS (POS)) (1)
6530 Q-TOF LC/MS (Agilent) (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Bruker (1)
Nuclear Magnetic Resonance (NMR) - (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
QExactive (1)

Publication Date

2023 (34)
2022 (27)
2024 (26)
2025 (26)
2026 (19)
2021 (17)
2020 (15)
2014 (14)
2019 (12)
2013 (7)
2018 (6)
2016 (3)
2015 (3)
2010 (3)
2012 (2)
2011 (2)
2008 (1)
2017 (1)

UNIPROT ID/AC

A0A024R563 (3)
A0A024R8H9 (3)
A0A024RAN2 (3)
A0A024RC46 (3)
A0A087WUD1 (3)
A0A087WVZ5 (3)
A0A087WWK8 (3)
A0A087WXI0 (3)
A0A087WZE9 (3)
A0A087X1S3 (3)
A0A0A0MR66 (3)
A0A0A0MS51 (3)
A0A0A0MSA7 (3)
A0A0B4J220 (3)
A0A0C4DG89 (3)
A0A0C4DGT3 (3)
A0AV96 (3)
A0AVT1 (3)
A0FGR8 (3)
A0FGR8-2 (3)
A0FGR8-6 (3)
Q9LIE5 (1)
O24646 (1)
Q9FFA7 (1)
Q9LTJ6 (1)
Q9FN03 (1)
Q8LGH4 (1)
Q9M086 (1)
Q9SYX2 (1)
P43254 (1)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000170477 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:17368 (11)
CHEBI:16708 (10)
CHEBI:55328 (10)
CHEBI:16704 (10)
CHEBI:7916 (10)
CHEBI:28834 (9)
CHEBI:17821 (9)
CHEBI:16027 (9)
CHEBI:17154 (9)
CHEBI:16335 (9)
CHEBI:16737 (9)
CHEBI:15354 (9)
CHEBI:17748 (8)
CHEBI:17750 (8)
CHEBI:15891 (8)
CHEBI:16196 (8)
CHEBI:17509 (8)
CHEBI:17015 (8)
CHEBI:32816 (8)
CHEBI:17203 (8)
CHEBI:16750 (8)
CHEBI:30915 (8)
CHEBI:16919 (8)
CHEBI:16347 (8)
CHEBI:64563 (8)
CHEBI:30769 (8)
CHEBI:46961 (7)
CHEBI:16755 (7)
CHEBI:16870 (7)
CHEBI:48131 (7)

Metabolite Name

Choline (6)
Deoxycholic acid (6)
L-Arginine (6)
Guanosine (6)
Thymidine (6)
Uridine (6)
Hypoxanthine (6)
Betaine (5)
Thymine (5)
Taurine (5)
Cholic acid (5)
L-Proline (5)
7-Sulfocholic acid (5)
Adenosine (5)
Urocanic acid (5)
Spermidine (5)
Guanine (5)
N-Acetyl-L-phenylalanine (5)
Adenine (5)
Creatine (5)
L-Carnitine (5)
Stearoylcarnitine (4)
Sphingosine (4)
Benzaldehyde (4)
Phytosphingosine (4)
D-Erythrose 4-phosphate (4)
L-Histidine (4)
Acetylcholine (4)
Indole (4)
L-Palmitoylcarnitine (4)

IsPrivate

False (1)

First Public Date

2022 (1)
2017 (1)

Modelling Approach

Ordinary differential equation model (1)

Study type

RNA-seq of coding RNA (15)
Transcription profiling by array (8)
Other (2)
ChIP-seq (2)
Methylation profiling by high throughput sequencing (2)
RNA-seq of non coding RNA (2)
Comparative genomic hybridization by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2025 (938)
2022 (869)
2024 (744)
2023 (710)
2021 (609)
2020 (414)
2019 (298)
2018 (233)
2017 (178)
2015 (145)
2026 (132)
2016 (122)
2014 (84)
2013 (61)
2012 (38)
2011 (22)
2010 (14)
2009 (11)
2008 (7)
2007 (7)
2006 (4)
2005 (2)
2004 (1)

Lab affiliation

Department of Biochemistry and Structural Biology and Center for Innovative Drug Discovery School of Medicine, University of Texas Health Science Center at San Antonio, 7703 Floyd Curl Drive, San Antonio, TX 78229, United States (2)
Hong Kong University of Science and Technology (2)
Lab of Jie Zheng, Neuroscience Research Institute and Department of Neurobiology, School of Basic Medical Sciences, Peking University, Beijing 100083, P.R. China (2)
Shandong University (2)
State Key Laboratory of Reproductive Medicine and Offspring Health， Nanjing Medical University, Nanjing, China. (2)
The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China (2)
1 Cancer Institute, Xuzhou Medical University, Xuzhou, Jiangsu, China. 2 Center of Clinical Oncology, The Affiliated Hospital of Xuzhou Medical University, Xuzhou, China. 3 State Key Laboratory Jiangsu Center for the Collaboration and Innovation of Cancer Biotherapy, Cancer Institute, Xuzhou Medical University, Xuzhou, Jiangsu, China. (1)
1 Department of Emergency, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine (1)
1 Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, PR China 2 Department of Microbiology and Immunology, Tongji University School of Medicine, Shanghai 200049, PR China 3 Clinical Translation Research Center, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, China. (1)
1. Institute of Comparative Medicine, College of Veterinary Medicine, Yangzhou University, Yangzhou 225009, China 2. Co-Innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, Yangzhou University, Yangzhou 225009, China (1)
Army Medical University (Third Military Medical University) (1)
Army Military Medical University (1)
Artemisinin Research Center, Institute of Chinese Materia Medica, China Academy ofChinese Medical Sciences (1)
Beijing Chaoyang Hospital, Capital Medical University (1)
Beijing Institute of Pharmacology and Toxicology (1)
Center for Proteomics and Department of Nutrition, School of Medicine, Case Western Reserve University, Cleveland, OH (1)
China Agricultural University (1)
College of Animal Science and Technology, China Agricultural University, Beijing 100193, China (1)
College of Animal Sciences and Technology, Huazhong Agricultural University, China (1)
College of Stomatology, Chongqing Medical University,Chongqing Key Laboratory of Oral Diseases and Biomedical Sciences,Chongqing Municipal Key Laboratory of Oral Biomedical Engineering of Higher Education,China (1)
Department of Analytical Chemistry and CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China, 201203 (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (1)
Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen, China (1)
Department of Clinical Laboratory Medicine, Shanghai Tenth People’s Hospital of Tongji University, Shanghai, 200072, China (1)
Department of Clinical Laboratory, National Center for Respiratory Medicine, National Clinical Research Center for Respiratory Disease, State Key Laboratory of Respiratory Disease, Guangzhou Institute of Respiratory Health, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, Guangdong 510120, China. (1)
Department of General Surgery & Guangdong Provincial Key Laboratory of Precision Medicine for Gastrointestinal Tumor, Nanfang Hospital, Southern Medical University, Guangzhou, Guangdong, China; Cancer Center of Beijing Tsinghua Changgung Hospital, School of Clinical Medicine, Tsinghua Medicine, Tsinghua University, Beijing, China (1)
Department of Hepatobiliary Surgery, the First Affiliated Hospital(Southwest Hospital) of Army Military Medical University, Chongqing 400038, China. (1)
Department of Infectious Diseases, Key Laboratory of Molecular Biology for Infectious Diseases, Institute for Viral Hepatitis, the Second Affiliated Hospital of Chongqing Medical University (1)
Department of Orthopedics, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei Province, 430030, PR China (1)
Department of Pathophysiology, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Rui-Jin Hospital, Shanghai Jiao Tong University School of Medicine (SJTU-SM), Shanghai 200025, China. (1)

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Qing-Re-Xiao-Zheng-Yi-Qi formula relieves kidney damage and activates mitophagy in diabetic kidney disease.

Not available

S-EPMC9807870 | biostudies-literature

Relationship between EGF, TGFA, and EGFR Gene Polymorphisms and Traditional Chinese Medicine ZHENG in Gastric Cancer.

Not available

S-EPMC3876898 | biostudies-literature

Metabolite signatures of diverse Camellia sinensis tea populations

Tea plants (Camellia sinensis) present an excellent system to study evolution and diversification of specialized metabolites due to their abundance in classes, numbers and contents. A large number of tea cultivars have been cultivated throughout the world not only because of their adaption to differ...

2020-10-05 | MTBLS1405 | MetaboLights

Alterations in the gene expression profile in SKOV3 cells exposed to elaiophylin

Elaiophylin was screened and identified as a novel autophagy inhibitor, with significant antitumor efficacy as a single agent. To explore the mechanisms by which elaiophylin kills cancer cells, NimbleGen 12x135K microarrays were used to find the gene expression changes in SKOV3 cells treated with el...

ORGANISM(S): Homo sapiens

2022-06-07 | GSE205529 | GEO

The role of transcription factor Yin Yang-1 in colorectal cancer.

Not available

S-EPMC10242864 | biostudies-literature

Quantitative high-throughput screening identifies cytoprotective molecules that enhance SUMO conjugation via the inhibition of SUMO-specific protease (SENP)2.

Not available

S-EPMC5892725 | biostudies-literature

LGR4 modulates breast cancer initiation, metastasis, and cancer stem cells.

Not available

S-EPMC5901378 | biostudies-literature

Qing-Re-Xiao-Zheng Formula Modulates Gut Microbiota and Inhibits Inflammation in Mice With Diabetic Kidney Disease.