Yao X X - OmicsDI

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Unknown (14487)
Proteomics (307)
Transcriptomics (115)
Metabolomics (43)
Genomics (32)
Genomic (1)
Other (1)

Organisms

Homo sapiens (197)
Mus musculus (113)
Rattus norvegicus (16)
Arabidopsis thaliana (9)
Escherichia coli (6)
Zea mays (4)
Gallus gallus (4)
Rattus rattus (4)
Brassica napus (3)
Bos taurus (3)
Aeromonas hydrophila subsp. hydrophila ATCC 7966 (3)
Oncorhynchus mykiss (2)
Oryza sativa (2)
Drosophila melanogaster (2)
Tardigrada (2)
Brassica rapa subsp. oleifera (1)
Penicillium oxalicum (1)
Ostrinia nubilalis (1)
Saccharina japonica (1)
Carassius auratus (1)
Streptococcus sp. 'group A' (1)
Arachis hypogaea (1)
Staphylococcus aureus subsp. aureus Mu50 (1)
Brassica rapa subsp. pekinensis (1)
Prunus persica (1)
Escherichia coli BW25113 (1)
Plasmodium falciparum (1)
Triticum aestivum (1)
Saccharomyces cerevisiae (1)
Danio rerio (1)

Organisms

Rattus norvegicus (1)

Repository

pride (172)
biostudies-arrayexpress (137)
iProX (120)
MetaboLights (42)
MassIVE (10)
EGA (6)
jPOST (3)
ENA (3)
PeptideAtlas (2)
dbGaP (1)
GNPS (1)
GPMDB (1)
NODE (1)

Tissue

Cell culture (34)
Brain (9)
Epithelial cell (7)
Liver (7)
Testis (7)
Whole body (7)
Blood (6)
Heart (6)
Root (6)
Spleen (6)
Abdominal adipose tissue (5)
Leaf (5)
Lung (5)
Blood cell (4)
Kidney (4)
Plant cell (4)
T cell (4)
Blood serum (3)
Hepatocyte (3)
Pancreas (3)
Seedling (3)
Male Reproductive System (2)
Blood plasma (2)
Cerebrospinal fluid (2)
Embryonic stem cell (2)
Fibroblast (2)
Flower (2)
Macrophage (2)
Oocyte (2)
Ovary (2)

Disease

Disease free (5)
COVID-19 (2)
Cardiovascular system disease (2)
Colon cancer (2)
Lung adenocarcinoma (2)
Malaria (2)
Non-small cell lung carcinoma (2)
Polycystic ovary syndrome (2)
High bone mineral density (1)
Not Available (1)
Acute leukemia (1)
Acute myocardial infarction (1)
Anemia (1)
Antenatal onset (1)
Arrhythmogenic right ventricular cardiomyopathy (1)
Brain glioma (1)
Breast cancer (1)
Cervix carcinoma (1)
Cholangiocarcinoma (1)
Gastric ulcer (1)
Hepatocellular carcinoma (1)
Hydronephrosis (1)
Hypochromic anemia (1)
Kidney cancer (1)
Lung cancer (1)
Lyme disease (1)
Malignant neoplasm of ovary (1)
Melanoma (1)
Oligospermia (1)
Ovarian serous carcinoma (1)

Technology Type

Mass Spectrometry (172)
Shotgun proteomics (92)
Mass spectrometry (26)
Bottom-up proteomics (21)
Data-dependent acquisition (15)
Gel-based experiment (14)
Affinity purification coupled with mass spectrometry proteomics (13)
Mass spectrometry assay (9)
NMR spectroscopy (8)
Data-independent acquisition (6)
SWATH MS (6)
Top-down proteomics (4)
Mass spectrometry imaging (3)
SRM/MRM (3)
All-ion fragmentation (2)
HDMSE (2)
Proteogenomics (2)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Metaproteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (13)
Liquid Chromatography MS - positive - reverse phase (13)
Liquid Chromatography MS - positive - hilic (7)
Liquid Chromatography MS - negative - hilic (6)
Nuclear Magnetic Resonance (NMR) - (6)
Illumina NovaSeq 6000 (3)
Q Exactive HF-X (3)
Illumina NovaSeq X (2)
LTQ Orbitrap (2)
Bruker (2)
Liquid Chromatography MS - alternating - reverse-phase (2)
Liquid Chromatography MS - positive - HILIC (2)
Illumina Genome Analyzer IIx (1)
Illumina HiSeq 2000 (1)
LTQ FT (1)
MaXis (1)
Instrument (1)
LTQ Orbitrap Velos ETD (1)
Q Exactive (1)
Q Exactive HF (1)
Q Exactive Plus (1)
Direct infusion MS - negative (1)
Exactive (Thermo Scientific) (1)
Gas Chromatography MS - (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - Negative (LC-MS (NEG)) (1)
Liquid Chromatography MS - Positive (LC-MS (POS)) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative (1)

Publication Date

2022 (79)
2025 (54)
2023 (51)
2021 (48)
2024 (46)
2015 (29)
2026 (27)
2013 (24)
2014 (23)
2012 (20)
2016 (18)
2020 (17)
2018 (15)
2010 (7)
2019 (7)
2011 (6)
2008 (5)
2007 (4)
2009 (3)
2017 (2)
2006 (1)
2005 (1)

UNIPROT ID/AC

A0A024R563 (2)
A0A024R8H9 (2)
A0A024RAN2 (2)
A0A024RC46 (2)
A0A075B6P5 (2)
A0A087WT59 (2)
A0A087WTX5 (2)
A0A087WVW2 (2)
A0A087WVZ5 (2)
A0A087WWA5 (2)
A0A087WXI0 (2)
A0A087WYL9 (2)
A0A087X130 (2)
A0A087X1S3 (2)
A0A087X1V9 (2)
A0A087X232 (2)
A0A0A0MS07 (2)
A0A0A0MS51 (2)
A0A0A0MSA7 (2)
A0A0B4J1V0 (2)
A0A0C4DG89 (2)
A0AV96 (2)
A0AVF1 (2)
A0AVT1 (2)
A0FGR8 (2)
A0FGR8-2 (2)
A0FGR8-6 (2)
A0M8Q6 (2)
A0MZ66 (2)
A0N5G5 (2)

ENSEMBL ID

ENSG00000170477 (2)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000247315 (2)
ENSG00000147251 (1)
ENSG00000204131 (1)

CHEBI ID

CHEBI:16919 (13)
CHEBI:16704 (11)
CHEBI:7916 (11)
CHEBI:15741 (9)
CHEBI:15891 (9)
CHEBI:17368 (9)
CHEBI:17568 (9)
CHEBI:17821 (9)
CHEBI:30915 (9)
CHEBI:16335 (8)
CHEBI:16449 (8)
CHEBI:16750 (8)
CHEBI:17895 (8)
CHEBI:28044 (8)
CHEBI:15428 (7)
CHEBI:16196 (7)
CHEBI:16737 (7)
CHEBI:17351 (7)
CHEBI:17596 (7)
CHEBI:27897 (7)
CHEBI:78320 (7)
CHEBI:15727 (6)
CHEBI:15756 (6)
CHEBI:16015 (6)
CHEBI:16040 (6)
CHEBI:16467 (6)
CHEBI:16708 (6)
CHEBI:16811 (6)
CHEBI:16828 (6)
CHEBI:16977 (6)

Metabolite Name

Creatine (12)
Hypoxanthine (10)
Taurine (9)
Uridine (9)
Guanosine (8)
Adenosine (7)
Creatinine (7)
L-Proline (7)
L-Tryptophan (7)
Pantothenic acid (7)
Thymine (7)
Uracil (7)
Adenine (6)
Azelaic acid (6)
Betaine (6)
Bilirubin (6)
Hippuric acid (6)
Histamine (6)
Kynurenic acid (6)
L-Arginine (6)
L-Methionine (6)
L-Tyrosine (6)
Lysine (6)
Ornithine (6)
Riboflavin (6)
Threonine (6)
Trigonelline (6)
Xanthine (6)
Xanthosine (6)
7-Ketocholesterol (5)

First Public Date

2026 (1)
2024 (1)
2022 (1)

Study type

Transcription profiling by array (66)
RNA-seq of coding RNA (28)
ChIP-seq (19)
Genotyping by array (4)
Methylation profiling by array (4)
RNA-seq of non coding RNA (4)
Transcription profiling by SAGE (2)
Unknown experiment type (2)
DNA-seq (2)
Methylation profiling by high throughput sequencing (2)
Differential (1)
Comparative genomic hybridization by array (1)
Other (1)
RNA-seq of total RNA (1)

Release Date

2025 (2413)
2022 (2058)
2023 (1907)
2024 (1906)
2021 (1418)
2020 (1078)
2019 (771)
2018 (606)
2017 (559)
2016 (422)
2015 (358)
2026 (323)
2014 (264)
2013 (154)
2012 (123)
2011 (66)
2010 (64)
2008 (44)
2009 (36)
2006 (17)
2007 (16)
2005 (6)
2004 (6)
2003 (3)
2001 (2)
2002 (1)
2000 (1)
1999 (1)
1998 (1)

Lab affiliation

Bio-X Institutes, Key Laboratory for the Genetics of Developmental and Neuropsychiatric Disorders (Ministry of Education), Shanghai Jiao Tong University, Shanghai, China (5)
School of Computer Science Department of Microbiology and Plant Biology University of Oklahoma, Norman, OK (5)
Gansu Provincial Key Lab of Aridland Crop Science/ Gansu Agricultural University, Lanzhou, China (3)
XiangYa hospital of Central south university (3)
Departments of Immunology and Radiation Oncology Moffitt Cancer Center Tampa, FL, USA (2)
Division of Nephrology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology (2)
Institute for Cardiovascular Regeneration, Centre for Molecular Medicine, Goethe University Frankfurt am Main, Germany (2)
Lab of Jie Zheng, Neuroscience Research Institute and Department of Neurobiology, School of Basic Medical Sciences, Peking University, Beijing 100083, P.R. China (2)
School of Life Sciences, Westlake University, Hangzhou, Zhejiang Province, China (2)
School of Life Sciences, Xiamen University (2)
Shanghai Institute of Rheumatology, Renji Hospital, Shanghai Jiao Tong University School of Medicine (SJTUSM) (2)
State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Xiamen University, Xiamen, Fujian 361102, China (2)
State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou 310027, China (2)
State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University, Nanjing 211166, Jiangsu, China (2)
State Key Laboratory of Reproductive Medicine. Department of Histology and Embryology, Nanjing Medical University, Nanjing, China (2)
State Key Laboratory of Reproductive Medicine. Department of Histology and Embryology, Nanjing Medical University, Nanjing, China. (2)
Tianjin Medical University Cancer Institute and Hospital (2)
Zhejiang University (2)
Associate Professor Developmental and Regenerative Biology School of Biomedical Sciences Faculty of Medicine The Chinese University of Hong Kong (1)
Basic Forestry and Proteomics Research Center, Fujian Agriculture and Forestry University, China (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technical University Munich (TUM) Gregor-Mendel-Straße 4 85354 Freising GERMANY (1)
Beijing University of Chemical Technology (1)
Beijing University of Chinese Medicine, School of Traditional Chinese Medicine, Attending Physician, Assistant Researcher (1)
Bone Marrow Transplantation Center, Department of Hematology, The First Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, China (1)
CAS Center for Excellence in Molecular Plant Science, Chinese Academic on Science (1)
CAS Key Laboratory of Genomics and Precision Medicine, Beijing Institute of Genomics, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, China (1)
Capital Institute of Pediatrics (1)
Center for Biomedical Mass Spectrometry, Department of Biochemistry, Boston University School of Medicine (1)
Center of Excellence for Molecular Food Sciences and Department of Biochemistry, University of Belgrade, Studentski trg 16,11000 Belgrade, Serbia Serbian Academy of Sciences and Arts, Knez Mihajlova 35 Belgrade, Serbia (1)
Center of Reproductive Medicine, Nanjing Jinling Hospital, Clinical School of Medical College, Nanjing University, China. (1)

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Retinal Proteomic Alterations and Combined Transcriptomic-proteomic Analysis in the Early Stages Progression of a Mouse Model of X-Linked Retinoschisis

X-linked retinoschisis (XLRS) is among the most common inherited degenerative retinopathies. Functional impairment of RS1 protein is the cause of XLRS, which presents childhood onset with typical structural and functional alterations. However, the molecular mechanisms underlying RS1 malfunction rema...

ORGANISM(S): Mus Musculus

2022-02-27 | PXD031901 |

EVA-X: a foundation model for general chest x-ray analysis with self-supervised learning.

Not available

S-EPMC12624024 | biostudies-literature

Genome-wide alteration of 5-hydroxymethylcytosine in a mouse model of fragile X-associated tremor/ataxia syndrome

Fragile X-associated tremor/ataxia syndrome (FXTAS) is a late-onset neurodegenerative disorder in which patients carry premutation alleles of 55-200 CGG repeats on the FMR1 gene. To date, whether alterations in epigenetic regulation modulate FXTAS has gone unexplored. 5-hydroxymethylcytosine (5hmC) ...

ORGANISM(S): Mus musculus

2013-10-17 | E-GEOD-49463 | biostudies-arrayexpress

Scientific X-ray: Scanning and quantifying the idea evolution of scientific publications

Not available

S-EPMC9518912 | biostudies-literature

Preparation and Electrochemical Performance of Na_2-xLi_xFePO₄F/C Composite Cathode Materials with Different Lithium/Sodium Ratios.

Not available

S-EPMC10821228 | biostudies-literature

Genetic polymorphisms of 16 X-STR loci in the Hani population from Southwest China.

Not available

S-EPMC9246014 | biostudies-literature

GPRASP2, a novel causative gene mutated in an X-linked recessive syndromic hearing loss.