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TranscriptomicsThe pyruvate-tricarboxylic acid cycle node: a focal point of virulence control in the enteric pathogen Yersinia pseudotuberculosis [rovA mutant]
Whole transcriptome assessment of the Yersinia pseudotuberculosis strain YPIII. The Y. pseudotuberculosis rovA regulon was determined in Yersinia minimal minimum developed for the study. RovA is a key regulator for Yersinia virulence. Y. pseudotuberculosis YPIII or the isogenic rovA mutant strain w...
ORGANISM(S): Yersinia pseudotuberculosis 
2014-09-17 | E-GEOD-54546 | biostudies-arrayexpress
TranscriptomicsThe pyruvate-tricarboxylic acid cycle node: a focal point of virulence control in the enteric pathogen Yersinia pseudotuberculosis [csrA mutant]
Whole transcriptome assessment of the Yersinia pseudotuberculosis strain YPIII. The Y. pseudotuberculosis csrA regulon was determined in Yersinia minimal minimum developed for the study. CsrA is a key regulator coordinating virulence and metabolism. Y. pseudotuberculosis YPIII or the isogenic csrA m...
ORGANISM(S): Yersinia pseudotuberculosis 
2014-09-17 | E-GEOD-54545 | biostudies-arrayexpress
TranscriptomicsThe pyruvate-tricarboxylic acid cycle node: a focal point of virulence control in the enteric pathogen Yersinia pseudotuberculosis [crp mutant]
Whole transcriptome assessment of the Yersinia pseudotuberculosis strain YPIII. The Y. pseudotuberculosis crp regulon was determined in Yersinia minimal minimum developed for the study. Crp is a key regulator coordinating virulence and metabolism. Y. pseudotuberculosis YPIII or the isogenic crp muta...
ORGANISM(S): Yersinia pseudotuberculosis 
2014-09-17 | E-GEOD-54544 | biostudies-arrayexpress
TranscriptomicsThe pyruvate-tricarboxylic acid cycle node: a focal point of virulence control in the enteric pathogen Yersinia pseudotuberculosis
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Yersinia pseudotuberculosis 
2014-09-17 | E-GEOD-54547 | biostudies-arrayexpress
MetabolomicsHuman Archaeological Dentin as Source of Polar and Less Polar Metabolites for Untargeted Metabolomic Research: The Case of Yersinia pestis
Metabolomic approaches, such as in clinical applications of living individuals, have shown potential use for solving questions regarding the past when applied to archaeological material. Here, we study for the first time the potential of this Omic approach as applied to metabolites extracted from ar...
2024-03-15 | MTBLS7394 | MetaboLights
TranscriptomicsTranscriptomic and phenotypic analysis reveals new functions for the Tat pathway in Yersinia pseudotuberculosis [dtatC-vs-ip_26C-log]
The Twin-arginine translocation (Tat) system promotes secretion of folded proteins that in bacteria are identified via an N-terminal signal peptide. Tat systems are associated with virulence in many bacterial pathogens and our previous studies revealed that Tat deficient Yersinia pseudotuberculosis ...
ORGANISM(S): Yersinia pseudotuberculosis IP 32953 
2016-07-01 | E-GEOD-80528 | biostudies-arrayexpress
TranscriptomicsComplex in vivo RNA-seq analysis reveal reprogramming of Yersinia from virulent to persistent mode during infection [RNA-seq]
We recently found that Yersinia pseudotuberculosis can be used as a model of persistent bacterial infections. We performed in vivo RNA-seq of bacteria in small cecal tissue biopsies at early and persistent stages of infection to determine strategies associated with persistence. Comprehensive analysi...
ORGANISM(S): Yersinia pseudotuberculosis YPIII 
2014-12-05 | E-GEOD-55292 | biostudies-arrayexpress
TranscriptomicsTranscriptomic and phenotypic analysis reveals new functions for the Tat pathway in Yersinia pseudotuberculosis [dtatC-vs-ip_26C-stat]
The Twin-arginine translocation (Tat) system promotes secretion of folded proteins that in bacteria are identified via an N-terminal signal peptide. Tat systems are associated with virulence in many bacterial pathogens and our previous studies revealed that Tat deficient Yersinia pseudotuberculosis ...
ORGANISM(S): Yersinia pseudotuberculosis IP 32953 
2016-07-01 | E-GEOD-80529 | biostudies-arrayexpress
GenomicsYersinia pseudotuberculosis
Yersinia pseudotuberculosis Genome sequencing
PRJNA775060 | ENA
GenomicsYersinia pseudotuberculosis
Yersinia pseudotuberculosis Genome sequencing
PRJNA1358262 | ENA
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