You Li L - OmicsDI

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Unknown (1820)
Models (511)
Transcriptomics (84)
Proteomics (67)
Metabolomics (15)
Genomics (10)
Multiomics (1)

Organisms

Homo sapiens (252)
Mus musculus (54)
Mammalia (52)
Saccharomyces cerevisiae (35)
Rattus (25)
Escherichia coli (19)
Oryctolagus cuniculus (17)
cellular organisms (17)
Cavia porcellus (11)
Drosophila melanogaster (11)
Arabidopsis thaliana (11)
Canis lupus familiaris (9)
Eukaryota (8)
Halobacterium salinarum (5)
Rattus norvegicus (5)
Methanosarcina barkeri (4)
Mycobacterium tuberculosis (3)
Arabidopsis (3)
Mus (3)
Embryophyta (3)
Ostreococcus tauri (2)
Blattabacterium sp. (2)
Felis catus (2)
Candidatus Palibaumannia cicadellinicola (2)
Candidatus Karelsulcia muelleri (2)
Homalodisca vitripennis (2)
Plasmodium falciparum (2)
Metazoa (2)
Human immunodeficiency virus 1 (2)
Bos taurus (2)

Repository

BioModels (511)
biostudies-arrayexpress (92)
pride (40)
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Tissue

Cell culture (19)
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Disease

Diabetes mellitus (6)
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Technology Type

Mass Spectrometry (40)
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Instrument Platform

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Liquid Chromatography MS - positive - hilic (1)

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2005 (372)
2024 (152)
2021 (22)
2012 (15)
2013 (14)
2022 (12)
2019 (11)
2010 (10)
2015 (8)
2023 (8)
2014 (7)
2016 (6)
2009 (5)
2020 (4)
2011 (4)
2008 (4)
2026 (4)
2025 (4)
2018 (3)
2006 (3)
2004 (3)
2017 (3)
2007 (2)

UNIPROT ID/AC

P24864 (9)
P06400 (7)
P24941 (6)
P04637 (6)
Q00987 (6)
P07663 (6)
Q01094 (5)
P00549 (5)
P04806 (5)
P00560 (5)
P16862 (5)
P16861 (5)
P00924 (5)
P00950 (5)
P00360 (5)
P06169 (5)
P12709 (5)
P14540 (5)
O96020 (4)
P06493 (4)
P22434 (4)
P06776 (4)
Q06147 (4)
Q12246 (4)
P50107 (4)
P32327 (4)
P11154 (4)
P11325 (4)
P40363 (4)
P26637 (4)

ENSEMBL ID

ENSG00000139318 (1)
ENSG00000168646 (1)
ENSBTAG00000027439.2 (1)
ENSBTAG00000019002.3 (1)
ENSBTAG00000039197.1 (1)
ENSBTAG00000016592.4 (1)
ENSBTAG00000038586.1 (1)
ENSBTAG00000035544.2 (1)
ENSBTAG00000016679.4 (1)
ENSBTAG00000011545.3 (1)
ENSBTAG00000001124.4 (1)
ENSBTAG00000011197.4 (1)
ENSBTAG00000016432.4 (1)
ENSBTAG00000014841.4 (1)
ENSBTAG00000015596.4 (1)
ENSBTAG00000014775.4 (1)
ENSBTAG00000020902.4 (1)
ENSBTAG00000030358.2 (1)
ENSBTAG00000006463.4 (1)
ENSBTAG00000006029.3 (1)
ENSBTAG00000014179.4 (1)
ENSBTAG00000021417.4 (1)
ENSBTAG00000001299.4 (1)
ENSBTAG00000004059.3 (1)
ENSBTAG00000015188.3 (1)
ENSBTAG00000008567.4 (1)
ENSBTAG00000015164.4 (1)
ENSBTAG00000012858.3 (1)
ENSBTAG00000007228.4 (1)
ENSBTAG00000006066.4 (1)

CHEBI ID

CHEBI:15422 (24)
CHEBI:29108 (20)
CHEBI:16761 (20)
CHEBI:15996 (14)
CHEBI:17552 (14)
CHEBI:16027 (14)
CHEBI:15361 (14)
CHEBI:15846 (14)
CHEBI:16108 (14)
CHEBI:17794 (13)
CHEBI:16908 (13)
CHEBI:33699 (13)
CHEBI:17835 (11)
CHEBI:16001 (11)
CHEBI:16526 (11)
CHEBI:16595 (10)
CHEBI:29052 (10)
CHEBI:18367 (10)
CHEBI:17754 (10)
CHEBI:15343 (10)
CHEBI:18021 (10)
CHEBI:15946 (10)
CHEBI:17234 (10)
CHEBI:17489 (9)
CHEBI:15351 (9)
CHEBI:16236 (9)
CHEBI:16905 (9)
CHEBI:16474 (9)
CHEBI:28602 (8)
CHEBI:15721 (8)

Metabolite Name

Chenodeoxycholic acid (4)
Deoxycholic acid (4)
Pipecolic acid (4)
Hypoxanthine (4)
N-Methylnicotinamide (3)
Pyroglutamic acid (3)
Alpha-dimorphecolic acid (3)
Piperidine (3)
Cholic acid (3)
Glycoursodeoxycholic acid (3)
Citric acid (3)
Isocitric acid (3)
Asparagine (3)
Adenosine (3)
Guanine (3)
Palmitic acid (3)
Guanosine (3)
1,4-dideoxy-1,4-imino-D-arabinitol (2)
Taurodeoxycholic acid (2)
Ursodeoxycholic acid (2)
Taurochenodeoxycholic acid (2)
Isoursodeoxycholic acid (2)
Isohyodeoxycholic acid (2)
SM(d16:1/24:1(15Z)) (2)
SM(d17:1/24:1(15Z)) (2)
PC-M6 (2)
Leukotriene B5 (2)
Ethyl tetradecanoate (2)
Trimethylaminoacetone (2)
3-Hydroxymethylglutaric acid (2)

IsPrivate

False (511)

Model Flag

Non Kinetic (71)
Non Miriam (14)
Sbml Extended (3)

Submitter Keywords

FROG (2)
TransQST (1)

Modelling Approach

Ordinary differential equation model (450)
Delayed differential equation model (3)
Constraint-based model (2)

Study type

Transcription profiling by array (65)
RNA-seq of coding RNA (12)
ChIP-seq (5)
DNA-seq (2)
MRE-seq (1)
Unknown experiment type (1)
Transcription profiling by tiling array (1)
Transcription profiling by RT-PCR (1)
Other (1)
Methylation profiling by array (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (287)
2022 (263)
2023 (251)
2024 (224)
2021 (194)
2020 (141)
2019 (101)
2018 (77)
2017 (64)
2016 (56)
2015 (53)
2014 (43)
2026 (38)
2013 (35)
2012 (31)
2010 (14)
2009 (12)
2011 (8)
2008 (8)
2005 (4)
2006 (3)
2004 (3)
2007 (2)

Lab affiliation

Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (14)
College of Animal Sciences, Zhejiang University, Hangzhou, P. R. China (9)
Northwest University (2)
Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (1)
Department of Toxicology, Guangdong Provincial Key Laboratory of Tropical Disease Research, School of Public Health, Southern Medical University, Guangzhou, China tel:17534997727 (1)
Institute of Animal Science, Chinese Academy of Agricultural Sciences (1)
Nanjing Medical University (1)
Peking University Health Science Center (1)
Peking university (1)
Peking university Shenzhen hospital (1)
School of Biomedical and Healthcare Sciences Plymouth University Drake Circus, Plymouth Devon PL4 8AA United Kingdom Ruhr University Bochum Department of plant Biochemistry 44801 Bochum Germany (1)
Shang dong university (1)
Shenzhen Institute of Advanced Technology (SIAT), Chinese Academy of Sciences (1)
Sichuan Academy of Grassland Sciences (1)
State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Xiamen University, Xiamen 361005, Fujian, China. (1)
State Key Laboratory of Reproduction Medicine (1)
shang dong university (1)
shang dong unversity (1)

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Genome-wide analysis of microRNAs and their targets involving in leaf senescence of rice

Enhancing grain production of rice (Oryza sativa L.) is a top priority in ensuring food security for human being. One approach to increase yield is to delay leaf senescence and to extend the available time for photosynthesis. microRNAs (miRNAs) are key regulators for aging and cellular senescence in...

ORGANISM(S): Oryza sativa

2015-01-01 | E-GEOD-62200 | biostudies-arrayexpress

Metabolomic analysis of alfalfa (Medicago sativa L.) root-symbiotic rhizobia responses under alkali stress

Alkaline salts (e.g., NaHCO3 and Na2CO3) causes more severe morphological and physiological damage to plants than neutral salts (e.g., NaCl and Na2SO4) due to differences in pH. The mechanism by which plants respond to alkali stress is not fully understood, especially in plants having symbotic relat...

2018-07-27 | MTBLS481 | MetaboLights

HPLC-QTRAP-MS-based metabolomics approach investigates the formation mechanisms of meat quality and flavor of Beijing You chicken.

Not available

S-EPMC9943843 | biostudies-literature

You2010_General_Yeast_mRNA_Translation

This the model from the article: A quantitative model for mRNA translation in Saccharomyces cerevisiae. You T, Coghill GM, Brown AJ. Yeast. 2010 Mar 19. epub ahead of print, PMID: 20306461 , doi: 10.1002/yea.1770 Ab...

2005-01-01 | MODEL8459127548 | BioModels

Methods to Improve Lithium Metal Anode for Li-S Batteries.

Not available

S-EPMC6914760 | biostudies-literature

Selection and validation reference genes for qRT-PCR normalization in different cultivars during fruit ripening and softening of peach (Prunus persica).

Not available

S-EPMC8012606 | biostudies-literature

Tuning 4f-Center Electron Structure by Schottky Defects for Catalyzing Li Diffusion to Achieve Long-Term Dendrite-Free Lithium Metal Battery.

Not available

S-EPMC9376855 | biostudies-literature

Taming Interfacial Ion-Dipole Interactions With d-Orbital Delocalized Electron Catalysis Expediates Low-Temperature Li Metal Batteries.

Not available