Young Simon S - OmicsDI

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Unknown (383)
Transcriptomics (50)
Genomics (46)
Proteomics (20)
Metabolomics (10)
Multiomics (6)
Other (2)
Genomic (1)

Organisms

Homo sapiens (37)
Mus musculus (16)
Arabidopsis thaliana (8)
Gallus gallus (5)
Pinus radiata (4)
Rattus norvegicus (4)
Saccharomyces cerevisiae (3)
Eucalyptus nitens (1)
Oncorhynchus gorbuscha (1)
Apis mellifera (1)
Salmo salar (1)
Oryza sativa Japonica Group (1)
Caenorhabditis elegans (1)
Toxoplasma gondii PRU (1)

Organisms

Mus musculus (18)
Arabidopsis thaliana (4)

Repository

biostudies-arrayexpress (49)
EGA (22)
ENA (22)
MassIVE (16)
MetaboLights (6)
pride (6)
geo (4)
GNPS (4)
dbGaP (1)

Tissue

Bile (1)
Brain (1)
Cell culture (1)
Fibroblast (1)
Immune system (1)
Kidney (1)
Liver (1)
Lung (1)
Peripheral blood mononuclear cell (1)

Disease

Primary tumor (1)
Human immunodeficiency virus infectious disease (1)

Technology Type

Illumina 15K (8)
Mass Spectrometry (6)
Mass spectrometry (4)
Shotgun proteomics (4)
Affymetrix 6.0, Illumina_670k - Illuminus, Illumina 1.2M (1)
Illumina CytoSNP, Illumina HumanOmni2.5, ILLUMINA, Illumina 450k, Illumina HiSeq 2000 (1)
Mass spectrometry assay (1)
NMR spectroscopy (1)
NMR spectroscopy assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
All-ion fragmentation (1)
Bottom-up proteomics (1)
Data-independent acquisition (1)

Instrument Platform

Q Exactive (6)
TripleTOF 5600 (6)
LTQ Orbitrap Elite (3)
LTQ Velos (3)
Liquid Chromatography MS - negative - reverse phase (3)
Liquid Chromatography MS - positive - hilic (3)
Liquid Chromatography MS - positive - reverse phase (3)
LTQ Orbitrap Velos (2)
TripleTOF 6600 (2)
Liquid Chromatography MS - negative - hilic (2)
Nuclear Magnetic Resonance (NMR) - (2)
G2565AA DNA microarray scanner [Agilent] (1)
Illumina Genome Analyzer IIx (1)
GenePix 4000B [Axon Instruments] (1)
Axon GenePix 4000B scanning hardware (1)
Vortex (1)
Illumina HiSeq 2000 (1)
LTQ (1)
Orbitrap Fusion (1)
HILIC_Neg_SYNAPT-G2_Waters (1)
HILIC_Pos_SYNAPT-G2_Waters (1)
Liquid Chromatography MS - alternating - hilic (1)
RP_Neg_SYNAPT-G2_Waters (1)
RP_Pos_SYNAPT-G2_Waters (1)

Publication Date

2017 (9)
2008 (8)
2007 (8)
2019 (8)
2013 (7)
2012 (7)
2010 (6)
2018 (5)
2011 (5)
2022 (5)
2014 (3)
2025 (3)
2015 (2)
2009 (2)
2006 (2)
2004 (2)
2026 (1)
2024 (1)

CHEBI ID

CHEBI:16704 (3)
CHEBI:16919 (3)
CHEBI:17775 (3)
CHEBI:57589 (3)
CHEBI:131690 (2)
CHEBI:131692 (2)
CHEBI:131743 (2)
CHEBI:145278 (2)
CHEBI:15318 (2)
CHEBI:156419 (2)
CHEBI:15756 (2)
CHEBI:16196 (2)
CHEBI:16347 (2)
CHEBI:16467 (2)
CHEBI:16577 (2)
CHEBI:16749 (2)
CHEBI:16755 (2)
CHEBI:16814 (2)
CHEBI:17311 (2)
CHEBI:174893 (2)
CHEBI:17490 (2)
CHEBI:17596 (2)
CHEBI:17659 (2)
CHEBI:17687 (2)
CHEBI:17730 (2)
CHEBI:17895 (2)
CHEBI:17929 (2)
CHEBI:18123 (2)
CHEBI:18332 (2)
CHEBI:19289 (2)

Metabolite Name

2,3-Octanedione (2)
25-Hydroxyvitamin D3-26,23-lactol (2)
3-Phenyl-1-propanol (2)
Acetyl-N-formyl-5-methoxykynurenamine (2)
Creatine (2)
L-Acetylcarnitine (2)
L-Cysteinylglycine disulfide (2)
LysoPC(18:2(9Z,12Z)) (2)
LysoPC(20:4(5Z,8Z,11Z,14Z)) (2)
LysoPC(22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (2)
Trans-Jasmone (2)
Trigonelline (2)
(-)-Epigallocatechin 3-gallate 7-glucoside 4-glucuronide" (1)
(1(10)E,4a,5E)-1(10),5-Germacradiene-12-acetoxy-4,11-diol (1)
(10beta-aH,11xi)-11-Hydroxy-13-nor-6-eremophilen-8-one (1)
(1R,16Z,24E,26E,28Z)-1,18-dihydroxy-12-[1-(4-hydroxy-3-methoxycyclohexyl)propan-2-yl]-19,30-dimethoxy-15,17,21,23,29-pentamethyl-35-methylidene-11,36-diox4-azatricyclo[30.3.1.0,]hexatriacont16,24,26,28-tetraene-2,3,10,14,20-pentone (1)
(24E)-3alpha-a,15alpha-Diacetoxy-23-oxo-7,9(11),24-lanostatrien-26-oic acid (1)
(2E)-Pentadecenoyl-CoA (1)
(2E,8Z)-Decadiene-4,6-diyn-1-yl 3-methylbutanoate (1)
(2RS,5RS)-(E)-2-(2-Phenylethenyl)-1,3-dioxan-5-ol (1)
(2S,6R,10R)-Trimethyl-hendecanoyl-CoA (1)
(3a,5b,7a)-23-Carboxy-7-hydroxy-24-norcholan-3-yl-b-D-Glucopyranosiduronic acid (1)
(3b,16a,20R)-25-Acetoxy-3,16,20,22-tetrahydroxy-5-cucurbiten-11-one 3-glucoside (1)
(3b,24R,25x)-26-Benzoyloxystigmast-5-ene-3-ol (1)
(3b,9R)-5-Megastigmene-3,9-diol 9-[apiosyl-(1->6)-glucoside] (1)
(5-ethenyl-2-hydroxyphenyl)oxidanesulfonic acid (1)
(6E,8E,10R,12Z)-10-Hydroxy-3-oxooctadecatrienoic acid (1)
(R)-2-hydroxyglutaric acid (1)
(R)-carnitine (1)
(R)-malic acid (1)

First Public Date

2014 (22)

Study type

Transcription profiling by array (31)
ChIP-chip by array (4)
Unknown experiment type (3)
RNA-seq of coding RNA (2)
FAIRE-seq (1)
ChIP-chip by tiling array (1)
Comparative genomic hybridization by array (1)
Other (1)
ChIP-seq (1)
DNA-seq (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2021 (49)
2022 (47)
2025 (40)
2024 (38)
2023 (27)
2020 (27)
2019 (26)
2015 (21)
2014 (21)
2018 (19)
2017 (14)
2016 (14)
2013 (13)
2012 (13)
2011 (13)
2008 (11)
2010 (10)
2009 (10)
2026 (9)
2007 (6)
2006 (2)
2004 (2)

Lab affiliation

Department of Microbiology; Icahn School of Medicine at Mount Sinai; New York, NY, 10029; USA (1)
Experimental Surgery, Department of Surgery, Charité - Universitätsmedizin Berlin (1)
Helmholtz Zentrum München, Institute of Lung Biology and Disease, Member of the German Center for Lung Research (DZL), Munich, Germany (1)
Research Group "Sports Medicine", Institute for Sport and Sport Science, TU Dortmund University (1)
Signalling in Apicomplexan Parasites Laboratory, The Francis Crick Institute, London NW1 1AT, UK (1)
University of Rochester Department of Biology (1)

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Postprandial Metabolism is Impaired in Overweight Normoglycemic Young Adults without Family History of Diabetes

While the risk factors for Type 2 diabetes (T2DM) are known, early predictive markers of transition from normal to a prediabetes state are unidentified. We studied the basal metabolism and metabolic response to a mixed-meal challenge in 110 healthy subjects in the age group of 18 to 40 years (Mal...

2019-03-14 | MTBLS743 | MetaboLights

Hyperhomocysteinemia-related serum metabolome alterations not normalized by short-term folic acid treatment

Introduction

Hyperhomocysteinemia (HHCys) is an independent risk factor for various diseases such as cardiovascular diseases, Alzheimer's, and cancers. Folate deficiency is one of the significant reasons for HHCys. However, it is not known whether folate deficiency with HHCys is associated w...

2022-02-07 | MTBLS2150 | MetaboLights

EFO: In preparation - Early Metabolic Predictors of Type 2 Diabetes Mellitus in Normoglycemic Adults: Insights from Six-Year Prospective Cohort Study

INTRODUCTION: Type 2 Diabetes mellitus (T2DM) is a chronic metabolic disorder characterized by insulin resistance and hyperglycemia, often preceded by latent metabolic disruptions. Early detection of metabolic alterations can facilitate timely intervention to delay or prevent T2DM onset. Metaboli...

2025-08-04 | MTBLS10965 | MetaboLights

Nectar-dwelling microbes of common tansy are attractive to its mosquito pollinator, Culex pipiens L.

Not available

S-EPMC7885224 | biostudies-literature

Sex differences in cardiovascular morbidity associated with familial hypercholesterolaemia: A retrospective cohort study of the UK Simon Broome register linked to national hospital records.

Not available

S-EPMC7754706 | biostudies-literature

The effect of changing haylages of differing chemical composition on the equid metabonome

Rapid changes between feeds can cause dysbiosis and colic. The metabolic consequences of changing between haylages is currently unknown. Objectives Characterise urinary and faecal metabonomics in ponies transitioned between haylages varying in botanical composition and physiological age and to deter...

2026-09-29 | MTBLS15865 | MetaboLights

Estrogen plus progestin and colorectal cancer incidence and mortality.

Not available

S-EPMC3488271 | biostudies-literature

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