Yu Bo B - OmicsDI

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Unknown (204)
Proteomics (45)
Genomics (22)
Metabolomics (13)
Transcriptomics (10)
Multiomics (6)
Models (1)

Organisms

Homo sapiens (43)
Chlamydomonas reinhardtii (13)
Marchantia polymorpha subsp. ruderalis (13)
Methylocystis sp. (13)
Porites pukoensis (13)
Bothrops insularis (13)
Bothrops jararaca (13)
Bothrops jararacussu (13)
Bothrops cotiara (13)
Streptomyces coelicolor (13)
Burkholderia ubonensis MSMB22 (13)
Pseudomonas aeruginosa PA103 (13)
Artibeus jamaicensis (13)
Morchella importuna (13)
Clostridium autoethanogenum (13)
Shewanella oneidensis MR-1 (13)
Leucocoprinus gongylophorus (13)
Bothrops brazili (13)
Mus musculus (6)
Cordyceps militaris (1)
Bemisia tabaci (1)
Arabidopsis thaliana (1)
Rosa roxburghii (1)
Ciona savignyi (1)
Lycium barbarum (1)
Solanum tuberosum (1)
Solanum lycopersicum (1)
Drosophila melanogaster (1)
Oryza sativa (1)
Rattus rattus (1)

Repository

iProX (25)
EGA (21)
pride (13)
MetaboLights (12)
biostudies-arrayexpress (11)
MassIVE (4)
PeptideAtlas (3)
BioModels (1)
GNPS (1)

Tissue

Cell culture (4)
Others (3)
Testis (2)
Blood serum (1)
Cell suspension culture (1)
Embryo (1)
Permanent cell line cell (1)
Epithelial cell (1)

Disease

Disease free (2)

Technology Type

Mass Spectrometry (13)
Mass spectrometry (9)
Bottom-up proteomics (4)
Shotgun proteomics (3)
Mass spectrometry assay (2)
Data-independent acquisition (2)
Data-dependent acquisition (2)
Affinity purification coupled with mass spectrometry proteomics (2)
NMR spectroscopy (1)
Olink affinity proteomics (1)
Affinity proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (5)
Liquid Chromatography MS - positive - reverse phase (5)
MS:1000031 (3)
6540 Q-TOF LC/MS (Agilent) (2)
Liquid Chromatography MS - negative - hilic (2)
LTQ Orbitrap Elite (2)
Illumina HiSeq 2000 (1)
MaXis (1)
LTQ FT (1)
Orbitrap Fusion Lumos (1)
Q Exactive (1)
Bruker (1)
Liquid Chromatography MS - negative - HILIC (1)
Liquid Chromatography MS - positive - HILIC (1)
Liquid Chromatography MS - positive - hilic (1)
QExactive (1)

Publication Date

2026 (8)
2025 (7)
2016 (6)
2014 (6)
2020 (5)
2024 (4)
2022 (4)
2021 (4)
2015 (3)
2013 (2)
2012 (2)
2010 (2)
2023 (2)
2011 (1)
2019 (1)

UNIPROT ID/AC

Q99619 (3)
Q6ZVE7 (3)
Q8N4U5 (3)
Q9UBZ4 (3)
Q96QP1 (3)
Q9Y576 (3)
Q6ZTQ3 (3)
Q9H633 (3)
Q96PC5-2 (3)
Q96PC5 (3)
Q8TDW5 (3)
Q9NXZ2 (3)
Q8IZP6 (3)
Q9UHA2 (3)
Q9C019 (3)
Q96EP1 (3)
Q8IYM2 (3)
Q86SJ2 (3)
Q6MZQ0 (3)
Q9Y2C3 (3)
O00338 (3)
Q02833 (3)
O43194 (3)
Q9BZD2 (3)
Q8WUA8 (3)
Q8NC06 (3)
Q8N1W1 (3)
Q6NSJ2 (3)
Q8WYP3 (3)
Q3MII6 (3)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000247315 (3)
ENSG00000170477 (3)

CHEBI ID

CHEBI:16704 (6)
CHEBI:17368 (6)
CHEBI:18344 (5)
CHEBI:28790 (5)
CHEBI:17351 (5)
CHEBI:16566 (5)
CHEBI:17015 (5)
CHEBI:7916 (5)
CHEBI:17509 (5)
CHEBI:15756 (5)
CHEBI:17568 (5)
CHEBI:17596 (5)
CHEBI:16750 (5)
CHEBI:16919 (5)
CHEBI:16708 (5)
CHEBI:41582 (4)
CHEBI:17992 (4)
CHEBI:16914 (4)
CHEBI:27823 (4)
CHEBI:15728 (4)
CHEBI:73685 (4)
CHEBI:16870 (4)
CHEBI:30763 (4)
CHEBI:48131 (4)
CHEBI:16393 (4)
CHEBI:71466 (4)
CHEBI:17012 (4)
CHEBI:16543 (4)
CHEBI:64032 (4)
CHEBI:74076 (4)

Metabolite Name

Hypoxanthine (4)
Adenine (4)
L-Histidine (4)
L-Serine (4)
Guanosine (4)
Inosine (4)
Roxithromycin (3)
L-Tyrosine (3)
Linoleic acid (3)
Dodecanoic acid (3)
Uracil (3)
Adenosine (3)
Creatine (3)
L-Phenylalanine (3)
L-Glutamine (3)
L-Threonine (3)
Xanthine (3)
Uridine (3)
Sucrose (3)
Dehydrocarpaine II (2)
Erythromycin 2'-acetate (2)
3,4-dihydroxy-4-methylhexadecanoic acid (2)
Nummularine A (2)
4-Hydroxybenzoic Acid (2)
Tyr-Val (2)
Geniposide (2)
Phe-Ile (2)
Pymetrozine (2)
Alpha-dihydroartemisinin (2)
S-Methyl-5'-thioadenosine (2)

IsPrivate

False (1)

Model Flag

Non Kinetic (1)

Modelling Approach

Constraint-based model (1)

Modification

Not available (1)

Study type

Transcription profiling by array (5)
RNA-seq of coding RNA (3)
Other (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (30)
2025 (28)
2021 (24)
2020 (19)
2023 (18)
2016 (17)
2024 (15)
2018 (14)
2015 (10)
2019 (10)
2012 (6)
2026 (5)
2014 (4)
2013 (4)
2017 (4)
2011 (3)
2010 (3)
2005 (1)

Lab affiliation

CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 200032, China (2)
Ocean University of China (2)
Department of Oncology,Mayo clinic, USA (1)
The Affiliated Suzhou Hospital of Nanjing Medical University, Suzhou Municipal Hospital,Suzhou 215002, China (1)
State Key Laboratory of Experimental Hematology, National Clinical Research Center for Blood Diseases, Institute of Hematology & Blood Diseases Hospital, Chinese Academy of Medical Sciences & Peking Union Medical College (1)
State Key Laboratory of Reproductive Medicine and Offspring Health, Center for Reproduction and Genetics, The Affiliated Suzhou Hospital of Nanjing Medical University, Suzhou Municipal Hospital, Gusu School, Nanjing Medical University, Suzhou 215002, China (1)
State Key Laboratory of Reproductive Medicine and Offspring Health, Center for Reproduction and Genetics, The Affiliated Suzhou Hospital of Nanjing Medical University, Suzhou Municipal Hospital, Gusu School, Nanjing Medical University, Suzhou 215002, China. (1)
Division of Pediatric Gastroenterology, Department of Pediatrics, Stanford University, Palo Alto, CA, 94304, USA. (1)
Department of System Biology, School of Life Sciences, Guangdong Provincial Key Laboratory of Cell Microenvironment and Disease Research, Shenzhen Key Laboratory of Cell Microenvironment, Southern University of Science and Technology, Shenzhen, 518055, China. (1)
State Key Laboratory of Reproductive Medicine and Offspring Health (Suzhou Center), The Affiliated Suzhou Hospital of Nanjing Medical University, Suzhou 215002, China. (1)
State Key Laboratory of Reproductive Medicine and Offspring Health, Center for Reproduction and Genetics, The Affiliated Suzhou Hospital of Nanjing Medical University, Suzhou Municipal Hospital, Gusu School of Nanjing Medical University, Suzhou 215002, China (1)

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Exploration of hanging coffin customs and the bo people in China through comparative genomics.

Not available

S-EPMC12634697 | biostudies-literature

L-fucose and fucoidan alleviate high-salt diet-promoted acute inflammation

Excessive salt intake is a widespread health issue observed in almost every country around the world. A high salt diet (HSD) has a strong correlation with numerous diseases, including hypertension, chronic kidney disease and autoimmune disorders. However, the mechanisms underlying HSD-promotion o...

2024-02-21 | MTBLS9134 | MetaboLights

Synergistic protection of tetramethylpyrazine phosphate and borneol on brain microvascular endothelium cells injured by hypoxia.

Not available

S-EPMC6511760 | biostudies-literature

Predictive effects of bilirubin on response of colorectal cancer to irinotecan-based chemotherapy.

Not available

S-EPMC4837442 | biostudies-literature

Distrontium lithium beryllium triborate, Sr(2)LiBeB(3)O(8).

Not available

S-EPMC3344286 | biostudies-literature

Serum SERPINB3/4 in Moderate-to-Severe Prurigo Nodularis: A Potential Biomarker for Disease Severity and Eosinophil-Related Parameters.

Not available