Yu Jin J - OmicsDI

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Unknown (2607)
Proteomics (90)
Genomics (32)
Transcriptomics (18)
Metabolomics (17)
Multiomics (4)

Organisms

Homo sapiens (66)
Aerococcus urinae NBRC 15544 = CCUG 36881 (39)
Alteromonadales (39)
Bacteria (39)
Canis lupus familiaris (39)
Carya cathayensis (39)
Ectopseudomonas oleovorans CECT 5344 (39)
Ensifer adhaerens (39)
Enterococcus faecalis (39)
Globicatella sanguinis (39)
Halictus scabiosae (39)
Histomonas meleagridis (39)
Human immunodeficiency virus 1 (39)
Mus musculus (9)
Arabidopsis thaliana (2)
Anser cygnoides (2)
Drosophila melanogaster (2)
Brassica oleracea (1)
Trichophyton rubrum (1)
Bacillus thuringiensis (1)
Staphylococcus aureus (1)
Caenorhabditis elegans (1)
Brassica napus var. napus (1)
Cutibacterium acnes 6609 (1)
Elaphe taeniura (1)
Nelumbo nucifera (1)
Neurospora crassa OR74A (1)
Oryctolagus cuniculus (1)
Saccharina japonica (1)
Spinacia oleracea (1)

Repository

pride (39)
iProX (38)
biostudies-arrayexpress (26)
EGA (24)
MetaboLights (17)
MassIVE (8)
PeptideAtlas (4)
jPOST (1)

Tissue

Cell culture (11)
Others (4)
Brain (3)
Epithelial cell (3)
Embryonic stem cell (2)
Liver (2)
Malignant cell (2)
Anther (1)
Blood cell (1)
Cell suspension culture (1)
Colon (1)
Cotyledon (1)
Embryo (1)
Extracellular vesicle (1)
Heart (1)
Hepatocyte (1)
Keratinocyte (1)
Kidney (1)
Macrophage (1)
Microglial cell (1)
Ovary epithelium cell line (1)
Pancreas (1)
Pancreatic ductal cell (1)
Permanent cell line cell (1)
Placenta (1)
Root (1)
Short term hematopoietic stem cell (1)
Skin (1)
Spinal column (1)
Stem cell (1)

Disease

Disease free (5)
Prostate adenocarcinoma (2)
VSV infection (1)
Coronavirus infectious disease (1)
Liver cancer (1)
Lymphoma (1)
Ovarian cancer (1)
Pancreatic cancer (1)

Technology Type

Mass Spectrometry (39)
Mass spectrometry (14)
Shotgun proteomics (12)
Bottom-up proteomics (8)
Data-dependent acquisition (7)
Affinity purification coupled with mass spectrometry proteomics (6)
Gel-based experiment (3)
SWATH MS (3)
Top-down proteomics (3)
NMR spectroscopy (2)
Illumina HiSeq 2000, HiSeq X Ten, Illumina HiSeq 2500, ILLUMINA (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Mass spectrometry assay (1)
MSE (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (7)
Liquid Chromatography MS - negative - reverse phase (7)
Orbitrap Fusion Lumos (3)
Q Exactive (3)
LTQ Orbitrap Elite (3)
Gas Chromatography MS - positive (2)
Nuclear Magnetic Resonance (NMR) - (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
Illumina HiSeq 4000 (1)
Orbitrap Ascend (1)
Orbitrap Eclipse (1)
Velos Plus (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
LTQ FT (1)
QExactive (1)

Publication Date

2025 (17)
2023 (17)
2024 (16)
2021 (16)
2022 (13)
2014 (10)
2020 (7)
2026 (6)
2019 (5)
2010 (5)
2013 (4)
2012 (3)
2017 (3)
2016 (2)
2007 (2)
2018 (2)
2015 (1)
2011 (1)
2009 (1)
2008 (1)

UNIPROT ID/AC

A0A024R563 (4)
A0A0A0MSA7 (4)
A0MZ66 (4)
A5A3E0 (4)
A5YM69 (4)
A6ND36 (4)
A6NNZ2 (4)
B4DPR2 (4)
B4E3A4 (4)
B7Z2U2 (4)
B7Z9B7 (4)
B7ZME8 (4)
C9JM50 (4)
C9JSZ1 (4)
C9JZR2 (4)
D6RE86 (4)
E5RK69 (4)
E7ESL9 (4)
E7EVA0 (4)
E9PFZ2 (4)
E9PKC0 (4)
E9PRE2 (4)
H0Y2V6 (4)
H0Y5B0 (4)
H0Y5C6 (4)
H0YDQ8 (4)
H0YFY6 (4)
H0YM50 (4)
H7BXH2 (4)
H7BY16 (4)

ENSEMBL ID

ENSG00000170477 (4)
ENSG00000147251 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:15891 (8)
CHEBI:16704 (8)
CHEBI:30769 (8)
CHEBI:15741 (7)
CHEBI:16359 (7)
CHEBI:48131 (7)
CHEBI:16015 (7)
CHEBI:16919 (7)
CHEBI:17351 (7)
CHEBI:17368 (7)
CHEBI:16040 (6)
CHEBI:9300 (6)
CHEBI:17154 (6)
CHEBI:16393 (6)
CHEBI:16335 (6)
CHEBI:17568 (6)
CHEBI:17509 (6)
CHEBI:17750 (6)
CHEBI:17203 (6)
CHEBI:16857 (6)
CHEBI:18012 (6)
CHEBI:32816 (6)
CHEBI:16027 (6)
CHEBI:16643 (6)
CHEBI:17596 (6)
CHEBI:28716 (6)
CHEBI:20067 (6)
CHEBI:50202 (5)
CHEBI:72998 (5)
CHEBI:83047 (5)

Metabolite Name

Cytosine (6)
Creatine (6)
Betaine (5)
Argininosuccinic acid (5)
Indole (5)
Creatinine (5)
Hypoxanthine (5)
Zerumbone (4)
Leucine (4)
Uracil (4)
Valine (4)
Kaempferol (4)
Sphingosine (4)
Serotonin (4)
Pyridoxine (4)
Biliverdin (4)
Acetylcholine (4)
Cotinine (4)
Nicotinamide (4)
Taurine (4)
Adenosine (4)
Guanine (4)
Cytidine (4)
Biotin (4)
Inosine (4)
Tetrahydrodeoxycorticosterone (3)
Triphenyl phosphate (3)
Gly-Lys (3)
N6,N6,N6-Trimethyl-L-lysine (3)
4-Oxoretinol (3)

Modification

-17.026549 (1)
15.994915 (1)
57.021464 (1)

Study type

Transcription profiling by array (9)
RNA-seq of coding RNA (6)
ChIP-seq (5)
Methylation profiling by high throughput sequencing (3)
ChIP-chip by tiling array (1)
Genotyping by array (1)
MicroRNA profiling by array (1)

Release Date

2025 (399)
2022 (329)
2024 (324)
2023 (323)
2021 (283)
2020 (186)
2019 (137)
2018 (125)
2017 (117)
2016 (88)
2015 (70)
2014 (66)
2026 (61)
2013 (33)
2012 (27)
2011 (21)
2010 (14)
2007 (8)
2009 (6)
2008 (5)
2006 (3)
2005 (3)
2003 (2)
2004 (1)
2002 (1)
1998 (1)

Lab affiliation

Abbvie Bioresearch Center (2)
Nankai University (2)
1Department of Urology, Emory University School of Medicine, Atlanta, GA, USA (1)
1Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA 2Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA 3Curriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA (1)
AbbVie Bioresearch Center (1)
AbbVie Bioresearch Center, Worcester, MA 01605, United States (1)
Acupuncture and Tuina School/Third Teaching Hospital, Chengdu University of Traditional Chinese Medicine (1)
Bengbu Medical University (1)
Cancer Institute, Fudan University Shanghai Cancer Center (1)
Colleage of Medicine, Seoul National University Seoul National University Hospital (1)
College of Animal Science, Jilin University, China (1)
College of Life Science, Northeast Foresty University, China (1)
Department of Biochemistry and Biophysics University of North Carolina Chapel Hill, NC USA (1)
Department of Biotechnology, Stem cell and biomaterial engineering Lab, Yonsei University, Republic of Korea. (1)
Department of Cellular and Molecular Pharmacology University of California San Francisco (UCSF) San Francisco, CA 94158 USA (1)
Department of Infectious Diseases and the Key Lab of Endogenous Infection, Shenzhen Nanshan People's Hospital and The 6th Affiliated Hospital of Shenzhen University Health Science Center, Shenzhen 518052, China (1)
Department of Life Science and Environmental Biochemistry, Life and Industry Convergence Research Institute, Pusan National University, Miryang 50463, Republic of Korea (1)
Department of Medicine, UF Health Cancer Center, University of Florida, Gainesville, FL 32610, USA. (1)
Department of Urology, Emory University School of Medicine, Atlanta, GA, USA (1)
Florey Institute, University of Melbourne, Parkville, Victoria 3052, Australia (1)
Gansu Agricultural University, College of Horticulture, Vegetable Cultivation and Physiology Laboratory (1)
Key Laboratory for Metabolic Diseases in Chinese Medicine, Nanjing University of Chinese Medicine (1)
Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and 9 Technology, Jinan University, Guangzhou 510632, China (1)
Lineberger Comprehensive Cancer Center, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA Department of Biochemistry and Biophysics, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA (1)
Molecular Structure of Cell Signalling Laboratory, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK (1)
Ocean University of China (1)
Research Center for Blood Engineering and Manufacturing, Cyrus Tang Medical Institute, National Clinical Research Center for Hematologic Diseases, Collaborative Innovation Center of Hematology, Jiangsu Institute of Hematology, Institute of Blood and Marrow Transplantation, The First Affiliated Hospital of Soochow University, State Key Laboratory of Radiation Medicine and Protection, Soochow University, Suzhou, China. (1)
School of Biomedical Sciences, The Chinese University of Hong Kong (1)
State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Animal Science and Technology, Guangxi University, Nanning, P.R. China (1)
State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University , No. 1 Shizishan Street, Wuhan, Hubei 430070, China (1)

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Steam-exploded okara ameliorates hepatic lipid metabolism in high-fat diet-induced obese C57BL/6J mice: Evidence from multi-omics characterization

Okara, a byproduct of soybean processing, possesses valuable nutritional and physiological properties. Steam explosion, an efficient physical modification technique, can increase the soluble dietary fiber (SDF) content in okara and potentially amplify its health benefits, such as anti-obesity eff...

2025-10-23 | MTBLS13154 | MetaboLights

Yu Jin Pulvis inhibits carbon tetrachloride-induced liver fibrosis by blocking the MAPK and PI3K/Akt signaling pathways.

Not available

S-EPMC6789276 | biostudies-literature

Network Pharmacology Prediction and Molecular Docking-Based Strategy to Discover the Potential Pharmacological Mechanism of Wen-Yu-Jin against Pulmonary Fibrosis in a Mouse Model.

Not available

S-EPMC8853792 | biostudies-literature

Expression Profiling and Proteomic Analysis of JIN Chinese Herbal Formula in Lung Carcinoma H460 Xenografts.

Not available

S-EPMC3770002 | biostudies-literature

Effects of the lncRNA NBR2 on the proliferation and autophagy of breast cancer cells under starvation conditions.

Not available

S-EPMC11442952 | biostudies-literature

A novel strategy for mining and identification of acylcarnitines using data-independent-acquisition (DIA) based retention time prediction modeling and pseudo-characteristic fragmentation ions matching

It is a challenging work to screen, identify, and quantify acylcarnitines in complex biological samples. A method, based on the retention time (RT) prediction and data-independent acquisition strategies, was proposed for the large-scale identification of acylcarnitines using liquid chromatography co...

2021-10-06 | MTBLS1932 | MetaboLights

Utilizing Polymer Micelle to Control Dye J-aggregation and Enhance Its Theranostic Capability.

Not available

S-EPMC6906732 | biostudies-literature

Study on the mechanism of Jin Gui Shen Qi Pill in the treatment of erectile dysfunction based on bioinformatics analysis.

Not available

S-EPMC9678517 | biostudies-literature

Efficacy and safety of Jin-shui Huan-xian granule for idiopathic pulmonary fibrosis: study protocol for a multicenter, randomized, double-blind, placebo-controlled trial.

Not available

S-EPMC9438282 | biostudies-literature

Phosphopeptide mass spectrometry analysis of LATS2 identifies a second autophosphorylation site in HEK293A cells

This dataset contains phosphopeptide LC-MS/MS data generated from human LATS2 overexpressed in HEK293A cells. The study was designed to identify LATS2 phosphorylation sites and to support phosphopeptide mapping of LATS2 autophosphorylation, with particular attention to the kinase-domain CLS site. Im...

ORGANISM(S): Homo sapiens (Human)

2026-06-29 | PXD076693 | Pride

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2764 Results

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