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TranscriptomicsRNA-seq analysis reveals the role of red light in resistance against Pseudomonas syringae pv. tomato DC3000 in tomato plants
Background: Plants attenuate their responses to a variety of bacterial and fungal pathogens, leading to higher incidences of pathogen infection at night. However, little is known about the molecular mechanism responsible for the light-induced defence response; transcriptome data would likely facilit...
ORGANISM(S): Solanum lycopersicum 
2015-09-14 | E-GEOD-64087 | biostudies-arrayexpress
Genomicsena-DATASET-DUKE-NUS-01-04-2016-09:56:06:868-175 - samples
CCA targeted sequencing
EGAD00001001994 | EGA
Genomicsena-DATASET-DUKE-NUS-28-03-2016-04:29:04:072-192 - samples
Cholangiocarcinoma whole genome sequencing data
EGAD00001001988 | EGA
Genomicsena-DATASET-DUKE-NUS-05-12-2017-07:28:25:856-358 - samples
This dataset contains whole genome sequencing FASTQ data for 12 cholangiocarcinoma tumor samples, and their matched normal samples. These 12 samples are in addition to 59 samples available in dataset EGAD00001001988, and consist of patients from Thailand, Romania, and Singapore. Paired-end sequencin...
EGAD00001003834 | EGA
GenomicsWhole-Genome and Epigenomic Landscapes of Etiologically Distinct Subtypes of Cholangiocarcinoma
Cholangiocarcinoma (CCA) is a hepatobiliary malignancy exhibiting high incidence in countries with endemic liver-fluke infection. We analyzed 489 CCAs from 10 countries, combining whole-genome (71 cases), targeted/exome, copy-number, gene expression, and DNA methylation information. Integrative clus...
EGAS00001001653 | EGA
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