Yu Zhang Z - OmicsDI

Show results for

Unknown (14723)
Proteomics (486)
Metabolomics (79)
Genomics (74)
Transcriptomics (73)
Multiomics (6)
Other (1)

Organisms

Homo sapiens (214)
Mus musculus (52)
Rattus norvegicus (10)
Arabidopsis thaliana (7)
Severe acute respiratory syndrome coronavirus 2 (5)
Oryza sativa Japonica Group (4)
Macaca mulatta (3)
Zea mays (3)
Oryza sativa (3)
Drosophila melanogaster (3)
Staphylococcus aureus (3)
Haemaphysalis longicornis (3)
Apis mellifera (2)
Saccharomyces cerevisiae (2)
Mycolicibacterium smegmatis MC2 155 (2)
Macaca fascicularis fascicularis (2)
Sus scrofa domesticus (2)
Yersinia pestis CO92 (2)
Rattus rattus (2)
Escherichia coli (2)
Rhodococcus opacus (1)
Brassica oleracea (1)
Deinococcus gobiensis (1)
Paralichthys olivaceus (1)
Citrus trifoliata (1)
Clonorchis sinensis (1)
synthetic construct (1)
Caenorhabditis elegans (1)
Bacillus siamensis (1)
Camellia oleifera (1)

Organisms

Mus musculus (1)

Repository

pride (277)
iProX (182)
biostudies-arrayexpress (79)
MetaboLights (79)
EGA (67)
PeptideAtlas (14)
MassIVE (11)
jPOST (2)
GPMDB (1)
ENA (1)

Tissue

Cell culture (70)
Epithelial cell (24)
Plant cell (16)
Liver (16)
Brain (14)
Plasma Non-glyco (11)
Whole body (9)
Lung (9)
Heart (8)
Blood plasma (8)
Testis (8)
Leaf (8)
Hepatocyte (7)
Kidney (7)
Blood serum (6)
Stem cell (6)
B cell (6)
Blood cell (6)
Permanent cell line cell (5)
Sperm (4)
Embryonic stem cell (4)
Embryo (4)
Spleen (4)
Blood (4)
Others (3)
Smooth muscle cell (3)
Urine (3)
Shoot (3)
Photosynthetic cell (3)
Neutrophil (3)

Disease

Disease free (13)
Breast cancer (8)
Prostate adenocarcinoma (5)
Acute leukemia (5)
Cervix carcinoma (4)
Colon cancer (4)
Lung cancer (3)
Alzheimer's disease (3)
Type 2 diabetes mellitus (3)
Non-small cell lung carcinoma (2)
Lymphoma (2)
Brain cancer (2)
Amyotrophic lateral sclerosis (2)
Malignant neoplasm of ovary (2)
Liver cancer (2)
Not Available (1)
Breast abscess (1)
Beta thalassemia (1)
Lung mixed small cell and squamous cell carcinoma (1)
Diarrhea (1)
Neutropenia (1)
Skin amelanotic melanoma (1)
Herpes simplex (1)
Cerebrovascular disease (1)
Coronavirus infectious disease (1)
Diabetes mellitus (1)
Polycystic Kidney (1)
Skin melanoma (1)
Diffuse gastric cancer (1)
Lung carcinoma (1)

Technology Type

Mass Spectrometry (277)
Shotgun proteomics (125)
Mass spectrometry (60)
Bottom-up proteomics (48)
Affinity purification coupled with mass spectrometry proteomics (29)
Data-dependent acquisition (23)
Top-down proteomics (17)
Mass spectrometry assay (16)
Gel-based experiment (15)
SWATH MS (12)
Data-independent acquisition (11)
Chemical cross-linking coupled with mass spectrometry proteomics (7)
Proteogenomics (4)
NMR spectroscopy (3)
MSE (3)
Illumina HiSeq 2000, ILLUMINA (2)
Illumina 2.5M, Illumina HiSeq 2000 (1)
AB SOLiD System 3.0 (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
Mass spectrometry imaging (1)
RNA mass spectrometry (1)
Immunopeptidomics (1)
DiaPASEF (1)
HDMSE (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (37)
Liquid Chromatography MS - positive - reverse phase (33)
TripleTOF 5600 (13)
Liquid Chromatography MS - positive - hilic (13)
Liquid Chromatography MS - negative - hilic (8)
Liquid Chromatography MS - alternating - reverse phase (5)
Illumina NovaSeq 6000 (3)
MS:1000031 (3)
Q Exactive (3)
LTQ Orbitrap Elite (3)
API 4000 QTRAP (AB Sciex) (3)
Liquid Chromatography MS - negative (3)
Liquid Chromatography MS - positive (3)
Liquid Chromatography MS - alternating - hilic (3)
TSQ Quantum XLS (Thermo Scientific) (2)
Agilent 5975E GC/MSD (Agilent) (2)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (2)
Liquid Chromatography MS - - reverse phase (2)
6540 Q-TOF LC/MS (Agilent) (2)
Bruker (2)
Liquid Chromatography MS - (2)
Illumina Genome Analyzer IIx (1)
Illumina Genome Analyzer II (1)
Instrument (1)
Agilent 7890A GC with 5975C inert XL MSD (1)
LTQ Orbitrap Velos (1)
Orbitrap Eclipse (1)
Q Exactive HF (1)
Orbitrap Fusion Lumos (1)

Publication Date

2022 (85)
2025 (81)
2024 (64)
2026 (60)
2023 (52)
2021 (49)
2020 (31)
2019 (31)
2014 (24)
2015 (19)
2012 (13)
2016 (12)
2018 (12)
2011 (11)
2010 (7)
2017 (7)
2013 (6)
2008 (4)
2009 (2)
2005 (1)

UNIPROT ID/AC

Q969Q0 (14)
Q9Y3U8 (14)
Q9Y224 (14)
Q9UN86-2 (14)
Q9UN86 (14)
Q9H0A0 (14)
Q9BQ39 (14)
Q8N3C0 (14)
Q86V81 (14)
Q7L2E3-2 (14)
Q7L2E3 (14)
Q6FG99 (14)
Q96SB4 (14)
Q9Y3I0 (14)
Q9P2E9 (14)
Q92841 (14)
Q92804-2 (14)
Q92804 (14)
Q92499 (14)
Q9NX58 (14)
Q9NR30 (14)
Q9H361 (14)
Q9H307 (14)
Q9BQG0 (14)
Q8NCA5 (14)
Q9UQ80 (14)
Q9UNX3 (14)
Q96E39 (14)
Q15185-4 (14)
Q15185 (14)

ENSEMBL ID

ENSG00000170477 (12)
ENSG00000247315 (7)
ENSG00000147251 (4)

CHEBI ID

CHEBI:16704 (30)
CHEBI:17154 (28)
CHEBI:16919 (27)
CHEBI:16750 (26)
CHEBI:17596 (26)
CHEBI:17368 (26)
CHEBI:17015 (25)
CHEBI:16335 (25)
CHEBI:17509 (25)
CHEBI:17895 (25)
CHEBI:16040 (24)
CHEBI:16708 (24)
CHEBI:15741 (24)
CHEBI:17750 (24)
CHEBI:15891 (24)
CHEBI:55328 (24)
CHEBI:17351 (24)
CHEBI:17748 (23)
CHEBI:16393 (23)
CHEBI:16467 (23)
CHEBI:16015 (23)
CHEBI:30769 (23)
CHEBI:17562 (22)
CHEBI:15727 (22)
CHEBI:30763 (22)
CHEBI:17405 (22)
CHEBI:48131 (22)
CHEBI:16737 (22)
CHEBI:17620 (21)
CHEBI:17568 (21)

Metabolite Name

Creatine (19)
Thymidine (18)
Adenosine (16)
Adenine (16)
Hypoxanthine (16)
Cytosine (15)
Betaine (14)
Taurine (14)
Cytidine (14)
Guanosine (14)
Uridine (14)
Creatinine (14)
L-Tyrosine (14)
Inosine (14)
Guanine (13)
Thymine (12)
L-Arginine (12)
Uracil (11)
Pantothenic acid (11)
Acetylcholine (11)
Urocanic acid (11)
Genistein (10)
4-Pyridoxic acid (10)
Pyridoxine (10)
Choline (10)
Cholic acid (10)
L-Glutamine (10)
Glycerophosphocholine (10)
L-Carnitine (10)
L-Valine (10)

First Public Date

2018 (1)

Study type

Transcription profiling by array (33)
RNA-seq of coding RNA (21)
RNA-seq of non coding RNA (7)
Other (4)
Methylation profiling by high throughput sequencing (3)
ChIP-seq (2)
Transcription profiling by SAGE (1)
Unknown experiment type (1)
RNA-seq of non coding RNA from single cells (1)
ChIP-chip by tiling array (1)
Genotyping by array (1)
Comparative genomic hybridization by array (1)
ScATAC-seq (1)
DNA-seq (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2025 (2526)
2022 (2185)
2024 (1976)
2023 (1932)
2021 (1490)
2020 (1076)
2019 (732)
2018 (579)
2017 (476)
2016 (382)
2026 (370)
2015 (352)
2014 (262)
2013 (136)
2012 (111)
2011 (72)
2010 (46)
2009 (36)
2008 (22)
2007 (12)
2005 (9)
2004 (8)
2006 (6)
2003 (3)
2002 (2)
1998 (1)

Lab affiliation

Department of Pharmacology, School of Medicine, Case Western Reserve University,cleveland,OH,USA (5)
Guangzhou Medical University (5)
Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Key Laboratory of Saline-alkali Vegetation Ecology Restoration in Oil Field, Ministry of Education, Harbin 150040, China (4)
Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX, USA. (3)
State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Sun Yat-sen University Cancer Center, Guangzhou 510060, China (3)
School of Life Sciences, The Chinese University of Hong Kong (3)
Medical Basic Research Innovation Center for Cardiovascular and Cerebrovascular Diseases, Ministry of Education, Nanjing Medical University, Nanjing, Jiangsu, China (3)
Xiamen University (3)
Ocean University of China (3)
Shanghaitech University (3)
Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and 9 Technology, Jinan University, Guangzhou 510632, China (2)
Department of Physiology & Biophysics, University of California, Irvine, Irvine, California, USA (2)
State Key Laboratory for Innovation and Transformation of Luobing Theory; Key Laboratory of Cardiovascular Remodeling and Function Research, Chinese Ministry of Education, Chinese National Health Commission and Chinese Academy of Medical Sciences; Department of Cardiology, Qilu Hospital of Shandong University, Jinan, China (2)
Shanghai Institute of Thoracic Oncology, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai 200030 (2)
Key Laboratory of Molecular Epigenetics of Ministry of Education (MOE), Northeast Normal University, Changchun, China. (2)
Proteome Exploration Laboratory, California Institute of Technology, Pasadena, CA, USA (2)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology and Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Science. Guangzhou, China (2)
Department of Endocrinology, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, China. (2)
Center for Stem Cell Biology and Tissue Engineering, Key Laboratory for Stem Cells and Tissue Engineering, Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, China. (2)
Department of Pathophysiology, Key Laboratory of Ministry of Education for Neurological Disorders, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology (2)
Third Military Medical University (2)
Center for Translational Medicine, The Affiliated Zhangjiagang Hospital of Soochow University, Suzhou Medical College of Soochow University (2)
Institute of Immunology and Department of Orthopaedics of the Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang 310058, China (2)
National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China (2)
China Agricultural University, College of Animal Science and Technolgoy, Animal genetics and breeding (2)
The Fifth Affiliated Hospital of Guangzhou Medical University (2)
ETH Zurich (2)
Shenzhen Sixth People's Hospital: Shenzhen, Guangdong, CN (2)
Shandong Academy of Agricultural Sciences, Jinan, Shandong, China (2)
Zhejiang University (2)

Tags

xref:PubMed:23747202 (1)
xref:PubMed:30457566 (1)
xref:PubMed:32055844 (1)
xref:PubMed:34412677 (1)
xref:PubMed:31903125 (1)

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Multi-omics integration reveals Yu-Xue-Bi tablets attenuate rheumatoid arthritis via metabolic reprogramming-mediated Piezo1 suppression

As a systemic chronic inflammatory disease, Rheumatoid arthritis (RA) is characterized by progressive inflammation, bone and cartilage destruction, leading to significant disability, reduced lifespan, and increased mortality. The clinical use of conventional medications including nonsteroidal ant...

2026-01-24 | MTBLS13760 | MetaboLights

The difference in early trimester fetal growth between singletons after frozen embryo transfer and fresh embryo transfer.

Not available

S-EPMC10998200 | biostudies-literature

Complete genome sequence of Lactobacillus casei Zhang, a new probiotic strain isolated from traditional homemade koumiss in Inner Mongolia, China.

Not available

S-EPMC2944517 | biostudies-literature

Mapping origins of replication in Arabidopsis thaliana: H4K5ac ChIP vs. unmodified H3 ChIP

Genomic integrity requires faithful chromosome duplication. Origins of replication are the genomic sites where DNA replication initiates in every cell cycle. There are multiple origins scattered throughout the eukaryotic genome whose genome-wide identification has been a hard challenge, especially i...

ORGANISM(S): Arabidopsis thaliana

2011-11-06 | E-GEOD-21827 | biostudies-arrayexpress

Subcellular localization of mutated β-catenins with different incidences of cis-peptide bonds at the Xaa246-P247 site in HepG2 cells.

Not available

S-EPMC6497428 | biostudies-literature

Mechanism of interventional effect and targets of Zhuyu Pill in regulating and suppressing colitis and cholestasis

Zhuyu pill (ZYP) is a traditional Chinese medicine prescription composed of two drugs, Coptis chinensis Franch. and Tetradium ruticarpum (A. Jussieu) T. G. Hartley, and is commonly used in the clinical treatment of diseases of the digestive system. However, the mechanism underly...

2022-11-02 | MTBLS4980 | MetaboLights

Proteomics analysis of Lactobacillus casei Zhang, a new probiotic bacterium isolated from traditional home-made koumiss in Inner Mongolia of China.

Not available

S-EPMC2758759 | biostudies-literature

Preparation of macrocyclic Z-enoates and (E,Z)- or (Z,E)-dienoates through catalytic stereoselective ring-closing metathesis.

Not available

S-EPMC4270125 | biostudies-literature

The Metabolites and Mechanism Analysis of Genistin against Hyperlipidemia via the UHPLC-Q-Exactive Orbitrap Mass Spectrometer and Metabolomics.

Not available

S-EPMC10005657 | biostudies-literature

Erianin alleviates diabetic retinopathy by reducing retinal inflammation initiated by microglial cells via inhibiting hyperglycemia-mediated ERK1/2-NF-κB signaling pathway.

Not available