Yuan Cheng C - OmicsDI

Show results for

Unknown (1037)
Proteomics (37)
Transcriptomics (30)
Metabolomics (7)
Genomics (3)
Other (1)

Organisms

Homo sapiens (36)
Mus musculus (19)
Danio rerio (6)
Staphylococcus aureus (1)
Gallus gallus (1)
Arabidopsis thaliana (1)
Haemaphysalis flava (1)
Schistosoma mansoni (1)
Giardia duodenalis (1)
Nicotiana tabacum (1)
Synechococcus elongatus PCC 7942 = FACHB-805 (1)
Zea mays (1)

Repository

biostudies-arrayexpress (31)
pride (19)
iProX (14)
MetaboLights (7)
EGA (2)
MassIVE (2)
PeptideAtlas (2)
GPMDB (1)

Tissue

Cell culture (3)
Male Reproductive System (2)
Brain (2)
Blood cell (1)
Blood plasma (1)
Embryonic stem cell (1)
Epithelial cell (1)
Heart (1)
Hepatic stellate cell (1)
Kidney (1)
Leaf (1)
Liver (1)
Macrophage (1)
Primary cell (1)
Seed (1)
Tendon (1)
White fat cell (1)

Disease

Not Available (1)
Severe acute respiratory syndrome (1)

Technology Type

Mass Spectrometry (19)
Shotgun proteomics (11)
Mass spectrometry (5)
Mass spectrometry assay (2)
Bottom-up proteomics (2)
Data-dependent acquisition (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Gel-based experiment (1)
Proteogenomics (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (4)
Liquid Chromatography MS - positive - reverse phase (4)
LTQ Orbitrap Velos (2)
Instrument (1)
LTQ Orbitrap (1)
Q Exactive (1)
6530 Q-TOF LC/MS (Agilent) (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - negative - HILIC (1)

Publication Date

2015 (12)
2014 (10)
2023 (8)
2025 (7)
2021 (7)
2022 (5)
2016 (4)
2024 (4)
2020 (3)
2018 (3)
2026 (3)
2013 (2)
2012 (2)
2011 (2)
2010 (1)
2017 (1)
2019 (1)

UNIPROT ID/AC

A0A024R563 (2)
A0A024R8H9 (2)
A0A024RAN2 (2)
A0A024RC46 (2)
A0A075B6P5 (2)
A0A087WT59 (2)
A0A087WTX5 (2)
A0A087WVW2 (2)
A0A087WVZ5 (2)
A0A087WWA5 (2)
A0A087WXI0 (2)
A0A087WYL9 (2)
A0A087X130 (2)
A0A087X1S3 (2)
A0A087X1V9 (2)
A0A087X232 (2)
A0A0A0MS07 (2)
A0A0A0MS51 (2)
A0A0A0MSA7 (2)
A0A0B4J1V0 (2)
A0A0C4DG89 (2)
A0AV96 (2)
A0AVF1 (2)
A0AVT1 (2)
A0FGR8 (2)
A0FGR8-2 (2)
A0FGR8-6 (2)
A0M8Q6 (2)
A0MZ66 (2)
A0N5G5 (2)

ENSEMBL ID

ENSG00000170477 (2)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000247315 (2)
ENSG00000147251 (1)
ENSG00000204131 (1)

CHEBI ID

CHEBI:16040 (4)
CHEBI:16196 (4)
CHEBI:16704 (4)
CHEBI:17895 (4)
CHEBI:15354 (3)
CHEBI:15741 (3)
CHEBI:15843 (3)
CHEBI:15956 (3)
CHEBI:15971 (3)
CHEBI:16015 (3)
CHEBI:16259 (3)
CHEBI:16335 (3)
CHEBI:16393 (3)
CHEBI:16467 (3)
CHEBI:16543 (3)
CHEBI:16827 (3)
CHEBI:16828 (3)
CHEBI:16857 (3)
CHEBI:16914 (3)
CHEBI:16927 (3)
CHEBI:17154 (3)
CHEBI:17191 (3)
CHEBI:17203 (3)
CHEBI:17295 (3)
CHEBI:17311 (3)
CHEBI:17405 (3)
CHEBI:17562 (3)
CHEBI:17568 (3)
CHEBI:17596 (3)
CHEBI:27432 (3)

Metabolite Name

Adenosine (3)
Caffeic acid (3)
L-tyrosine (3)
Salicylic acid (3)
Succinic acid (3)
Uric acid (3)
Uridine (3)
1-Monomyristin (2)
1-methyladenosine (2)
1-methylnicotinamide (2)
3-O-p-Coumaroylquinic acid (2)
3-methoxytyramine (2)
3-methoxytyrosine (2)
4-Oxoretinol (2)
4-Pyridoxic acid (2)
Abscisic acid (2)
Adenine (2)
Azelaic acid (2)
Benzoic acid (2)
Betaine (2)
Blumenol C glucoside (2)
Cafestol (2)
Caffeine (2)
Cannabidiolic acid (2)
Cantharidin (2)
Catechin (2)
Choline (2)
Chrysin (2)
Citric acid (2)
Cortisone (2)

Study type

Transcription profiling by array (18)
RNA-seq of coding RNA (9)
Other (2)
ChIP-seq (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (165)
2022 (133)
2023 (131)
2024 (123)
2021 (103)
2020 (73)
2019 (62)
2017 (48)
2018 (45)
2016 (43)
2015 (34)
2014 (34)
2026 (26)
2013 (14)
2011 (10)
2010 (8)
2012 (7)
2009 (7)
2007 (1)
2002 (1)

Lab affiliation

Central South University (2)
The Cancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Institutes of Basic Medicine and Cancer (IBMC), Chinese Academy of Sciences, Hangzhou 310022, China (2)
Department of Health Technology and Informatics, The Hong Kong Polytechnic University, Hong Kong (1)
Department of Obstetrics/Gynecology, Joint Laboratory of Reproductive Medicine (SCU-CUHK), Key Laboratory of Obstetric, Gynecologic and Pediatric Diseases and Birth Defects of Ministry of Education, West China Second University Hospital, Sichuan University, Chengdu 610041, China. (1)
Department of Orthopedics, The Fourth Medical Centre, Chinese PLA General Hospital, Beijing, China National Clinical Research Center for Orthopedics, Sports Medicine & Rehabilitation, Beijing, China (1)
Department of Plant Pathology and Microbiology, Texas A&M University (1)
Department of Radiation Oncology, Zhongshan Hospital, Fudan University (1)
Departments of Critical Care Medicine, the First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, 150001, China. (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Harbin Medical University Cancer Hospital (1)
Institute of Plant Virology, Ningbo University, Ningbo, China (1)
Jilin University (1)
Key Laboratory of Regenerative Biology and Guangdong Provincial Key Laboratory of Stem Cells and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, China (1)
Program for Cancer and Cell Biology, Department of Human Anatomy, Histology and Embryology, and PKU International Cancer Institute, Peking University Health Science Center, #38 Xue Yuan Road, Beijing 100191, China. (1)
School of Biomedical Sciences, The University of Hong Kong (1)
Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong University, Shanghai, China. (1)
The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, China. (1)

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Molecular Cloning and Characterization of a New Family VI Esterase from an Activated Sludge Metagenome.

Not available

S-EPMC9786865 | biostudies-literature

Will Sofosbuvir/Ledipasvir (Harvoni) Be Cost-Effective and Affordable for Chinese Patients Infected with Hepatitis C Virus? An Economic Analysis Using Real-World Data.

Not available

S-EPMC4898683 | biostudies-literature

Peptides mimicking viral proteins of porcine circovirus type 2 were profiled by the spectrum of mouse anti-PCV2 antibodies.

Not available

S-EPMC5433044 | biostudies-literature

Multiple biochemical indices and metabolomics of Clonorchis sinensis provide a novel interpretation of biomarkers

BACKGROUND: Clonorchiasis, an infectious disease caused by the liver fluke Clonorchis sinensis, may lead to the development of liver and gallbladder diseases, and even cholangiocarcinoma (CCA). However, the pathogenesis, host-pathogen interaction, and diagnostic markers ...

2022-06-24 | MTBLS3306 | MetaboLights

Efficacy and safety of 3-week response-guided triple direct-acting antiviral therapy for chronic hepatitis C infection: a phase 2, open-label, proof-of-concept study.

Not available

S-EPMC5131925 | biostudies-literature

Transcriptomic and metabolomic analyses reveal the differential accumulation of phenylpropanoids and terpenoids in hemp autotetraploid and its diploid progenitor

Background

Cannabis sativa, a dioecious plant that has been cultivated worldwide for thousands of years, is known for its secondary metabolites, especially cannabinoids, which possess several medicinal effects. In this study, we investigated the autopolyploidization effects on the biosynthes...

2023-09-21 | MTBLS6032 | MetaboLights

The plastome and phylogenetic status of Cotoneaster rosiflorus (Rosaceae).

Not available

S-EPMC11299456 | biostudies-literature

C/EBP homologous protein promotes Sonic Hedgehog secretion from type II alveolar epithelial cells and activates Hedgehog signaling pathway of fibroblast in pulmonary fibrosis.

Not available

S-EPMC8991723 | biostudies-literature

RNA-seq analysis of flg22-induced gene expression changes in wild type, asr3-1 mutant and OX9 overexpression line

The correlation coefficient (R) for the expression profile of all transcripts between WT and asr3-1, and between WT and OX9 without flg22 treatment is close to linear, suggesting that ASR3 does not affect general gene transcription. Hierarchical clustering analysis flg22-induced genes in any of the ...

ORGANISM(S): Arabidopsis thaliana

2015-08-26 | E-GEOD-63603 | biostudies-arrayexpress

Endoplasmic reticulum stress modulates the fate of lung resident mesenchymal stem cell to myofibroblast via C/EBP homologous protein during pulmonary fibrosis.

Not available

S-EPMC9241222 | biostudies-literature

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1115 Results

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OmicsDI is part of the ELIXIR infrastructure

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