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TranscriptomicsRNA sequencing to assess the transcriptional dynamics of infection when Fusarium oxysporum f. sp. lycopersici (Fol) WT and erc3 (Early Root Colonisation 3) knock out strain infect Marchantia polymorpha Tak-1 thalli
21 DPI Marchantia polymorpha Tak-1 thalli were infected with Fol WT and erc3 knock out alongside mock(water) control and axenically grown Fol WT culture. At 3 days post infection, thalli were harvested and RNA was extracted. After polyA enrichment, and library preparation, sequencing was carried on...
ORGANISM(S): Marchantia polymorpha subsp. polymorpha 
2026-05-04 | E-MTAB-15091 | biostudies-arrayexpress
TranscriptomicsRNA sequencing for axenically grown Fol and Fo47 fungal cultures as well as Marchantia polymorpha Tak1 thalli infected with these strains
RNA was extracted from axenically grown Fo47 and Fol cultures and Marchantia polymorpha Tak1 thalli infected with these strains at 3DPI. There are 3 biological replicates in each set. Sequencing was carried out using NovaSeq 6000 platform using SP flowcell with 2x100bp sequencing read length.
ORGANISM(S): Fusarium oxysporum 
2026-05-04 | E-MTAB-15092 | biostudies-arrayexpress
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