Zhang Ai L AL - OmicsDI

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Unknown (249)
Transcriptomics (5)
Proteomics (4)
Metabolomics (3)

Organisms

Homo sapiens (4)
Triticum aestivum (1)
Escherichia coli (1)
196114 (1)
Bos taurus (1)

Repository

biostudies-arrayexpress (5)
MetaboLights (3)
pride (2)
iProX (1)
MassIVE (1)

Tissue

Cell culture (1)

Disease

Raji Burkitt's lymphoma (1)

Technology Type

Mass spectrometry (2)
Mass Spectrometry (2)
Mass spectrometry assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Shotgun proteomics (1)

Instrument Platform

Orbitrap Fusion Lumos (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2023 (2)
2026 (2)
2016 (1)
2015 (1)
2012 (1)
2011 (1)
2008 (1)
2020 (1)
2024 (1)
2022 (1)

CHEBI ID

CHEBI:1014 (1)
CHEBI:125610 (1)
CHEBI:133343 (1)
CHEBI:133530 (1)
CHEBI:134612 (1)
CHEBI:136618 (1)
CHEBI:136623 (1)
CHEBI:137228 (1)
CHEBI:137245 (1)
CHEBI:13790 (1)
CHEBI:138367 (1)
CHEBI:138389 (1)
CHEBI:138391 (1)
CHEBI:138394 (1)
CHEBI:140768 (1)
CHEBI:141395 (1)
CHEBI:1438 (1)
CHEBI:144461 (1)
CHEBI:145593 (1)
CHEBI:15354 (1)
CHEBI:15428 (1)
CHEBI:15611 (1)
CHEBI:15698 (1)
CHEBI:15724 (1)
CHEBI:15729 (1)
CHEBI:15741 (1)
CHEBI:15756 (1)
CHEBI:157839 (1)
CHEBI:15882 (1)
CHEBI:15887 (1)

Metabolite Name

Spermidine (2)
Undecanedioic acid (2)
(+)-Prosopinine (1)
(+/-)-Bocconarborine A (1)
(+/-)-Bocconarborine B (1)
(1-((1-Methylpiperidin-2-yl)methyl)-1H-indol-3-yl)(naphthalen-1-yl)methanone (1)
(1-hexyl-5-phenyl-1H-pyrrol-3-yl)(naphthalen-1-yl)methanone (1)
(10)-Gingerol (1)
(1R,12S,16Z,24E,26E,28Z,32S)-1,18-dihydroxy-12-[1-(4-hydroxy-3-methoxycyclohexyl)propan-2-yl]-19,30-dimethoxy-15,17,21,23,29,35-hexamethyl-11,36-dioxa-4-azatricyclo[30.3.1.0,]hexatriaconta-16,24,26,28-tetraene-2,3,10,14,20-pentone (1)
(1R,16Z,24E,26E,28Z)-1,18-dihydroxy-12-[1-(4-hydroxy-3-methoxycyclohexyl)propan-2-yl]-29-(hydroxymethyl)-19,30-dimethoxy-15,17,21,23,35-pentamethyl-11,36-dioxa-4-azatricyclo[30.3.1.0,]hexatriaconta-16,24,26,28-tetraene-2,3,10,14,20-pentone (1)
(1R,2R,5Z,12R,13S,16Z)-25-(9H-pyrido[3,4-b]indol-1-yl)-11,22-diazapentacyclo[11.11.2.12,22.02,12.04,11]heptacosa-5,16,25-trien-13-ol (1)
(1R,2S,13S,16S,17S,19R,20R,22S,25S,27S)-1,2,24,24-tetramethyl-8,9-bis(3-methylbut-2-enyl)-22-(2-methylprop-1-enyl)-18,21,23,26-tetraoxa-4-azaoctacyclo[14.13.0.02,13.03,11.05,10.017,19.017,27.020,25]nonacosa-3(11),5(10),6,8-tetraen-16-ol (1)
(1R,2S,4S,6R,7S,8R,9S,12S,13S,18S)-6-methoxy-7,9,13-trimethyl-6-[(3S)-3-methyl-4-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxybutyl]-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-16-one (1)
(1R,3S,6S,7E,13S,16R,17R,21S,22S)-17-[(2R,4R,5S,6R)-5-[(2S,4R,5S,6R)-4,5-dihydroxy-6-methyloxan-2-yl]oxy-4-hydroxy-6-methyloxan-2-yl]oxy-28-hydroxy-3,22-dimethyl-23,26-dioxo-24,27-dioxapentacyclo[23.2.1.01,6.013,22.016,21]octacosa-4,7,14,25(28)-tetraene-4-carboxylic acid (1)
(1S,2R,4aR,6aS,6bR,12aS,12bR,14bR)-1,2,4a,6a,6b,9,12a-Heptamethyl-1,2,3,4,4a,5,6,6a,6b,7,8,8a,11,12,12a,12b,13,14b-octadecahydropicene (1)
(1S,2S,6R,7S,9R,10R,11R)-1,4,4-trimethyl-8,13-dioxatetracyclo[8.2.1.02,6.07,11]tridecane-9,10-diol (1)
(1S,3R)-5-[3-[4-[(1S,3R)-6,8-dihydroxy-1,3-dimethyl-1,2,3,4-tetrahydroisoquinolin-5-yl]-1-hydroxy-8-methoxy-6-methylnaphthalen-2-yl]-4-hydroxy-5-methoxy-7-methylnaphthalen-1-yl]-1,3-dimethyl-1,2,3,4-tetrahydroisoquinoline-6,8-diol (1)
(1S,3Z,5R,7R)-3-[(3,4-dihydroxyphenyl)-hydroxy-methylene]-1-[(2S)-2-isopropenyl-5-methyl-hex-4-enyl]-6,6-dimethyl-5,7-bis(3-methylbut-2-enyl)bicyclo[3.3.1]nonane-2,4,9-trione (1)
(1S,4R)-1,7,7-trimethylbicyclo[2.2.1]heptane-2,3-dione (1)
(1aR,7aS,10aS,10bS)-1a,5-dimethyl-8-methylidene-2,3,6,7,7a,8,10a,10b-octahydrooxireno[9,10]cyclodeca[1,2-b]furan-9(1aH)-one (1)
(2-Chloro-benzyl)-pyridin-3-ylmethyl-amine (1)
(2-Iodophenyl)(1-((1-methylpiperidin-2-yl)methyl)-1H-indol-3-yl)methanone (1)
(2-methoxy-4-{2-[(1R,16Z,24E,26E,28Z)-1,18,19-trihydroxy-30-methoxy-15,17,21,23,29,35-hexamethyl-2,3,10,14,20-pentaoxo-11,36-dioxa-4-azatricyclo[30.3.1.0,]hexatriaconta-16,24,26,28-tetraen-12-yl]propyl}cyclohexyl)oxidanesulfonic acid (1)
(2-{[3-(3,4-Dihydroxy-5-methoxyphenyl)prop-2-enoyl]oxy}ethyl)trimethylazanium (1)
(23S)-23,25,26-trihydroxycalciol (1)
(25S)-26-Hydroxy-24-methylenecycloartan-3-one (1)
(2R)-2-[(2R,3R,4S)-3,4-bis(2-hydroxyethoxy)oxolan-2-yl]-2-hydroxyethyl dodecanoate (1)
(2R)-2-hydroxy-N-[(2S,3R,4E,8E)-3-hydroxy-1-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhexadeca-4,8-dien-2-yl]tetracosanamide (1)
(2R)-O-phospho-3-sulfolactic acid (1)
(2R,13R,14S,15S,17S)-17-hydroxy-2,13,14,15-tetramethyl-14-propanoyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadeca-3,6-dien-5-one (1)

Study type

Transcription profiling by array (4)
RNA-seq of coding RNA (1)

Release Date

2020 (41)
2022 (36)
2025 (33)
2023 (32)
2021 (29)
2024 (27)
2018 (14)
2017 (11)
2026 (7)
2015 (5)
2013 (5)
2016 (3)
2012 (2)
2011 (2)
2019 (2)
2014 (2)
2010 (2)
2008 (1)

Lab affiliation

Dept.Pharmacology & Chemical Biology UPMC Hillman Cancer Center (1)
University of Greifswald, Institute of Microbiology, Department of Microbial Proteomics, Felix-Hausdorff-Str. 8, 17489 Greifswald, Germany (1)

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Transcription profiling of E.coli reveals indole cell signaling occurs primarily at low temperatures in Escherichia coli

We have shown the quorum-sensing signals acylhomoserine lactones (AHLs), autoinducer-2 (AI-2), and indole influence the biofilm formation of Escherichia coli. Here, we investigate how the environment, i.e., temperature, affects indole and AI-2 signaling in E. coli. We show in biofilms that indole a...

ORGANISM(S): Escherichia coli

2008-06-18 | E-GEOD-9923 | biostudies-arrayexpress

Prostatic Stromal Cell Gene Expression

We generated prostatic stromal microarray expression data for functional validation of our LOH/AI hot-/cold-spots in stroma. Stromal cells from normal peripheral zone tissue and from tumors are grown in culture, and were analyed on gene expression platform. Stromal cells cultured from normal periphe...

ORGANISM(S): Homo sapiens

2012-02-27 | E-GEOD-34312 | biostudies-arrayexpress

The organelle genomes of Hassawi rice (Oryza sativa L.) and its hybrid in saudi arabia: genome variation, rearrangement, and origins.

Not available

S-EPMC3409126 | biostudies-literature

Environment scan of generative AI infrastructure for clinical and translational science.

Not available

S-EPMC11762411 | biostudies-literature

Functional and Transcriptomic Characterization of iPSC-derived Macrophages and their Application in Modeling Mendelian Disease

Using RNA-Seq, we reported novel findings in the comparison of transcriptome profiles of isogenic HMDM and IPSDM during differentiation and polarization. First, IPSDM lost expression of pluripotency markers, had remarkably distinct gene expression profiles relative to precursor iPSCs, and had largel...

ORGANISM(S): Homo sapiens

2015-07-08 | E-GEOD-55536 | biostudies-arrayexpress

Data-driven engineering framework with AI algorithm of Ginkgo Folium tablets manufacturing

Not available

S-EPMC10213986 | biostudies-literature

Environment Scan of Generative AI Infrastructure for Clinical and Translational Science.

Not available

S-EPMC12478420 | biostudies-literature

Investigating chronic myeloid leukemia therapeutics: AI-optimized design and synthesis of 4-methylthiazole-2-amine derivatives with translocation control activity.

Not available

S-EPMC12681243 | biostudies-literature

Seasonal and day/night variations of microbial metabolic functioning in simulated cloud water

Microorganisms maintain metabolic activity in clouds, with recognized impacts on chemical reactivity by contributing to the processing of small organic compounds, radicals and their precursors. However, the conditions in clouds can be highly contrasted (temperature, light, etc), and it remains un...

2026-02-12 | MTBLS12281 | MetaboLights

Artificial Intelligence, Wearables and Remote Monitoring for Heart Failure: Current and Future Applications.

Not available

S-EPMC9777312 | biostudies-literature

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261 Results

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