Zhang C-C CC - OmicsDI

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Unknown (2436)
Proteomics (87)
Transcriptomics (68)
Genomics (65)
Metabolomics (25)
Multiomics (1)

Organisms

Homo sapiens (144)
Mus musculus (30)
Arabidopsis thaliana (9)
Rattus norvegicus (7)
Ovis aries (3)
Mycobacterium tuberculosis (2)
Saccharomyces cerevisiae (2)
Pteropus alecto (1)
Manihot esculenta (1)
uncultured bacterium (1)
Danio rerio (1)
Aspergillus oryzae RIB40 (1)
Chlorocebus aethiops (1)
Citrullus lanatus (1)
Dendrobium huoshanense (1)
Equus caballus (1)
Escherichia coli (1)
Escherichia coli str. K-12 substr. W3110 (1)
Granulicella sp. (1)
Myotis pilosus (1)
Oryza sativa (1)
Plasmodium falciparum 3D7 (1)
Plutella xylostella (1)
Pseudomonas aeruginosa PAO1 (1)
Rhodococcus sp. DN22 (1)
Sus scrofa domesticus (1)
Xenopus laevis (1)
uncultured Clostridium sp. (1)

Organisms

Homo sapiens (1)

Repository

pride (78)
biostudies-arrayexpress (74)
EGA (57)
MetaboLights (24)
MassIVE (4)
iProX (3)
PanoramaPublic (2)
geo (1)
GNPS (1)
ENA (1)

Tissue

Cell culture (15)
Brain (6)
Epithelial cell (5)
Liver (5)
Neutrophil (5)
Heart (4)
Whole body (4)
Blood (3)
Kidney (3)
Whole plant (3)
Blood serum (2)
Plant cell (2)
Root (2)
Seedling (2)
T cell (2)
Testis (2)
B cell (1)
Blood cancer cell (1)
Blood cell (1)
Blood plasma (1)
Bone cancer cell line (1)
Brain cancer cell line (1)
Breast cancer cell (1)
Breast cancer cell line (1)
Bursa copulatrix (1)
Cardiac gastric gland (1)
Cardiac muscle cell (1)
Cartilage (1)
Cecum cancer cell line (1)
Schwann cell (1)

Disease

Colon cancer (4)
Breast cancer (3)
Disease free (3)
Malignant neoplasm of ovary (3)
Acute leukemia (2)
Brain cancer (2)
Prostate adenocarcinoma (2)
Temporal lobe epilepsy (2)
HPV positive (1)
Adult respiratory distress syndrome (1)
Alzheimer's disease (1)
Breast abscess (1)
Cancer (1)
Cardiovascular system disease (1)
Cervix carcinoma (1)
Congenital heart disease (1)
Heart disease (1)
Hepatocellular carcinoma (1)
Inflammation (1)
Kidney cancer (1)
Lung cancer (1)
Lung mixed small cell and squamous cell carcinoma (1)
Malaria (1)
Mixed disorder as reaction to stress (1)
Osteoarthritis (1)
Parkinson's disease (1)
Prostate cancer (1)
Renal cell carcinoma (1)
Secondary progressive multiple sclerosis (1)
Skin amelanotic melanoma (1)

Technology Type

Mass Spectrometry (78)
Shotgun proteomics (48)
Mass spectrometry (21)
Bottom-up proteomics (11)
Affinity purification coupled with mass spectrometry proteomics (7)
Data-dependent acquisition (6)
Gel-based experiment (5)
Top-down proteomics (3)
Mass spectrometry assay (2)
Affinity proteomics (2)
Mass spectrometry imaging (2)
SWATH MS (2)
Affymetrix 6.0 (1)
Illumina 1.2M, Affymetrix 6.0 (1)
Illumina HiSeq 2500 (1)
NMR spectroscopy (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
Proteogenomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (12)
Liquid Chromatography MS - negative - reverse phase (5)
Liquid Chromatography MS - negative - hilic (3)
Chemostat (2)
Illumina HiSeq 2500 (2)
Gas Chromatography MS - (2)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - positive - hilic (2)
Microsyringe for intraperitoneal injection (1)
Computational server/cluster, Software: R (v4.3.x), Seurat package (v5.1.0) (1)
Biological safety cabinet, Centrifuge, Cell strainer, Automated cell counter/Hemocytometer (1)
Surgical dissection tools (1)
BD Rhapsody system (1)
Agilent Surescan High Resolution DNA microarray Scanner (1)
Agilent microarray Scanner (1)
Agilent Microarray Hybridization Chamber Kit and Hybridization oven rotator (1)
Agilent miRNA Complete Labeling and Hyb Kit (1)
Extraction kit (1)
Illumina iScan (1)
Illumina NovaSeq X (1)
Illumina MiSeq (1)
LTQ FT (1)
MaXis (1)
LTQ Orbitrap Elite (1)
Orbitrap Fusion ETD (1)
Q Exactive (1)
TripleTOF 5600 (1)
Bruker (1)
LMJ-SSP/ESI MS (Imaging MS) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)

Publication Date

2023 (24)
2012 (15)
2021 (14)
2020 (14)
2015 (13)
2022 (13)
2013 (12)
2024 (12)
2014 (11)
2025 (10)
2017 (9)
2026 (6)
2019 (6)
2018 (6)
2016 (5)
2010 (5)
2009 (5)
2011 (4)
2007 (2)
2006 (1)

CHEBI ID

CHEBI:30769 (6)
CHEBI:15428 (4)
CHEBI:15741 (4)
CHEBI:16196 (4)
CHEBI:16359 (4)
CHEBI:16977 (4)
CHEBI:17148 (4)
CHEBI:17596 (4)
CHEBI:17895 (4)
CHEBI:18012 (4)
CHEBI:35038 (4)
CHEBI:422 (4)
CHEBI:75342 (4)
CHEBI:15603 (3)
CHEBI:15756 (3)
CHEBI:15971 (3)
CHEBI:16002 (3)
CHEBI:16015 (3)
CHEBI:16199 (3)
CHEBI:16335 (3)
CHEBI:16414 (3)
CHEBI:16610 (3)
CHEBI:16643 (3)
CHEBI:16995 (3)
CHEBI:17191 (3)
CHEBI:17203 (3)
CHEBI:17351 (3)
CHEBI:17561 (3)
CHEBI:17697 (3)
CHEBI:17859 (3)

Metabolite Name

Cholic acid (4)
Inosine (4)
Glycine (3)
L-Ornithine (3)
L-alanine (3)
L-histidine (3)
L-leucine (3)
L-methionine (3)
L-proline (3)
L-valine (3)
PS(18:1(9Z)/0:0) (3)
Spermidine (3)
Succinate (3)
Trans-EKODE-(E)-Ib (3)
Tris(2-butoxyethyl) phosphate (3)
(1'S)-Averantin (2)
(2R,3R)-3-Methylglutamyl-5-semialdehyde-N6-lysine (2)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
(2S,4S)-Monatin (2)
(9R,10S,12Z)-9,10-Dihydroxy-8-oxo-12-octadecenoic acid (2)
(E)-2-Methyl-2-buten-1-ol O-beta-D-Glucopyranoside (2)
(R)-2,3-Dihydroxy-3-methylbutanoate (2)
(R)-Ruxolitinib (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
1-Acetoxy-2-hydroxy-16-heptadecyn-4-one (2)
1-Heneicosanoyl-glycero-3-phosphoserine (2)
1-O-Hexadecyl-sn-glycero-3-phosphocholine (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
11-Dehydro-thromboxane B2 (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)

First Public Date

2019 (1)

Modification

Heavy form (1)
Heavy form - site K (1)
Medium form - site K (1)
Medium form - site N-term (1)

Study type

Transcription profiling by array (48)
RNA-seq of coding RNA (10)
Unknown experiment type (2)
ChIP-seq (2)
MicroRNA profiling by array (2)
DNA-seq (2)
Methylation profiling by array (2)
Methylation profiling by high throughput sequencing (2)
Comparative genomic hybridization by array (1)
Ribo-seq (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (263)
2020 (223)
2023 (216)
2021 (205)
2025 (197)
2018 (185)
2024 (174)
2017 (171)
2019 (161)
2015 (139)
2016 (131)
2014 (115)
2013 (90)
2012 (76)
2011 (56)
2010 (39)
2009 (21)
2026 (19)
2008 (14)
2007 (5)
2006 (4)
2003 (2)
2001 (2)
1999 (1)
1995 (1)

Lab affiliation

Carnegie Mass Spectrometry Facility (2)
Icahn School of Medicine at Mount Sinai (2)
National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, 5 Dong Dan San Tiao, Dongcheng District, Beijing 100005, China. (2)
National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China (2)
Shanghai Center for Plant Stress Biology (2)
"Institute of Biomedical and Pharmaceutical Sciences, Guangdong University of Technology, Guangzhou 510006, China" (1)
1 Department of Genetics, Harvard Medical School, Boston, MA 02115 (1)
1, Department of Biology, Institute of Molecular Systems Biology, ETH, Zurich, Switzerland 2, Faculty of Science, University of Zurich, Zurich, Switzerland (1)
1Department of Hematology, Xiangya Hospital, Central South University, Changsha 410080, China 2NHC Key Laboratory of Carcinogenesis, Department of Microbiology, School of Basic Medical Science, Central South University, Changsha 410078, China (1)
1Department of Pharmacology, University of Colorado School of Medicine, Aurora, CO 80045, USA (1)
2 Yuanmingyuan West Road, Haidian District, Beijing, P.R. China 100193Yuanmingyuan West Road, Haidian District, Beijing, P.R. China 100193 (1)
2011 Collaborative Innovation Center of Tianjin for Medical Epigenetics, Tianjin Key Laboratory of Medical Epigenetics, Key Laboratory of Immune Microenvironment and Disease (Ministry of Education), Department of Biochemistry and Molecular Biology, Tianjin Medical University, Tianjin 300070, China (1)
2Division of Pharmaceutical Sciences, School of Pharmacy, University of Wisconsin-Madison, Madison, Madison, WI 53705, USA (1)
Adelaide Proteomics Centre (1)
Beijing Academy of Agriculture and Forestry Sciences (1)
Brigham and Women's Hospital, Harvard Medical School (1)
CIR, Queen’s Medical Research Institute, University of Edinburgh (1)
Cell Biology Department Harvard Medical School (1)
China agricultural university, preventive veterinary medicine (1)
College of Biology and the Environment, Nanjing Forestry University (1)
College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University (1)
College of Pharmacy, Anhui University of Chinese Medicine, Hefei 230012, China (1)
College of Plant Protection, Northwest A&F University (1)
Department of Andrology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, China (1)
Department of Biochemistry, Purdue University (1)
Department of Bioloigcal Science, National University of Singapore (1)
Department of Cancer Biology, Wake Forest Baptist Hospital (1)
Department of Forensic Medicine, Faculty of Basic Medical Sciences, Chongqing Medical University (1)
Department of Genetics, Harvard Medical School, Boston, MA 02115 (1)
Department of Genome Sciences, University of Washington, Seatte, WA, USA (1)

Tags

xref:PubMed:33398433 (1)

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Metabolomics to elucidate the effects of novel sustainable feed additives in the feed of farmed salmon (HoloFood Trial C - blue mussel ensilage-dose response)

Testing the effect of blue mussel ensilage as a novel cost-efficient protein feed source for Atlantic salmon feed. Fermentation of novel raw materials for fish feed is a new practice with little prior experience of direct relevance to aquaculture and fish farming. In Trial C, alternative processi...

2023-06-13 | MTBLS4384 | MetaboLights

Survival effect of PDGF-CC rescues neurons from apoptosis in both brain and retina by regulating GSK3b phosphorylation

Platelet-derived growth factor-CC (PDGF-CC) is the third member of the PDGF family discovered after more than two decades of studies on the original members of the family, PDGF-AA and PDGF-BB. The biological function of PDGF-CC remains largely to be explored. We report here a novel finding that PDGF...

ORGANISM(S): Mus musculus

2010-06-24 | E-GEOD-19207 | biostudies-arrayexpress

Association of TM6SF2 rs58542926 T/C gene polymorphism with hepatocellular carcinoma: a meta-analysis.

Not available

S-EPMC6868855 | biostudies-literature

Association of PNPLA3 rs738409 G/C gene polymorphism with nonalcoholic fatty liver disease in children: a meta-analysis.

Not available

S-EPMC7433068 | biostudies-literature

Apolipoprotein C3 (-455T>C) polymorphism confers susceptibility to nonalcoholic fatty liver disease in the Southern Han Chinese population.

Not available

S-EPMC4194587 | biostudies-literature

Oligomeric cystatin C supports the immunosuppressive activity of myeloid cells through interaction with inhibitory receptors.

Not available

S-EPMC12615798 | biostudies-literature

Identification of potential interactors of COMPANION OF CELLULOSE SYNTHASE (CC) 1

Salt stress is one of the most detrimental abiotic stresses for plants. The plant cell wall, which encases plant cells and functions as a cellular exoskeleton, is an important structure to cope with such stresses. One of the main components of the cell wall is cellulose, which is synthesized by cell...

ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress)

2024-08-30 | PXD047667 | Pride

Association of the pri-miR-34b/c rs4938723 T > C polymorphism with hepatoblastoma susceptibility in Eastern Chinese children: A five-center case-control study.

Not available

S-EPMC12211766 | biostudies-literature

Heterogeneous nuclear ribonucleoprotein G regulates splice site selection by binding to CC(A/C)-rich regions in pre-mRNA.

Not available

S-EPMC2682879 | biostudies-literature

Upregulation of FAM83F by c-Myc promotes cervical cancer growth and aerobic glycolysis via Wnt/β-catenin signaling activation.

Not available

S-EPMC10725447 | biostudies-literature

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2681 Results

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