Zhang Xin X - OmicsDI

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Unknown (1607)
Proteomics (189)
Transcriptomics (38)
Genomics (31)
Metabolomics (20)
Other (2)
Models (1)
Multiomics (1)

Organisms

Homo sapiens (119)
Mus musculus (35)
Glycine max (4)
Rattus norvegicus (4)
Bemisia tabaci (2)
Arabidopsis thaliana (2)
Chlamydomonas priscui (2)
Drosophila melanogaster (2)
Rattus rattus (2)
Tardigrada (2)
(Populus tomentosa x Populus bolleana) x Populus tomentosa (1)
Manihot esculenta (1)
Lateolabrax japonicus (1)
Bombyx mori (1)
Setaria italica (1)
196114 (1)
Aeromonas hydrophila subsp. hydrophila ATCC 7966 (1)
Bartonella henselae str. Houston-1 (1)
Chaetomium globosum (1)
Escherichia coli (1)
Mus (1)
Mus sp. (1)
Mycobacterium tuberculosis variant bovis BCG (1)
Mycobacterium tuberculosis variant bovis BCG str. Frappier (1)
Mycobacterium tuberculosis variant bovis BCG str. Glaxo (1)
Mycobacterium tuberculosis variant bovis BCG str. Korea 1168P (1)
Mycobacterium tuberculosis variant bovis BCG str. Moreau (1)
Mycobacterium tuberculosis variant bovis BCG str. Pasteur 1173P2 (1)
Mycobacterium tuberculosis variant bovis BCG str. Phipps (1)
Mycobacterium tuberculosis variant bovis BCG str. Sweden (1)

Repository

iProX (118)
pride (52)
biostudies-arrayexpress (44)
EGA (25)
MetaboLights (19)
PeptideAtlas (11)
MassIVE (8)
Cell Collective (1)
GNPS (1)
GPMDB (1)
jPOST (1)

Tissue

Cell culture (14)
Plasma Non-glyco (11)
Liver (6)
Brain (4)
Epithelial cell (3)
Leaf (3)
Plant cell (3)
Blood serum (2)
Early embryonic cell (2)
Embryonic stem cell (2)
Root (2)
Stem cell (2)
Whole body (2)
Abscission zone (1)
Blood cell (1)
Blood plasma (1)
Cell suspension culture (1)
Cerebrospinal fluid (1)
Dental pulp cell (1)
Erythrocyte (1)
Esophagus (1)
Fibroblast (1)
HESC cell (1)
Hair follicle dermal papilla cell (1)
Head (1)
Heart (1)
Kidney (1)
Lung (1)
Mammary gland epithelial cell (1)
Neural progenitor cell (1)

Disease

Breast cancer (3)
Disease free (2)
Not Available (1)
Acute leukemia (1)
Alopecia (1)
Cardiovascular system disease (1)
Colon cancer (1)
Esophagus adenocarcinoma (1)
Malignant neoplasm of ovary (1)
Urinary bladder cancer (1)
Wounds and Injuries (1)
Zika fever (1)

Technology Type

Mass Spectrometry (52)
Shotgun proteomics (31)
Mass spectrometry (15)
Data-dependent acquisition (6)
Gel-based experiment (6)
Bottom-up proteomics (5)
Mass spectrometry assay (4)
MSE (2)
Mass spectrometry imaging (2)
SWATH MS (2)
Top-down proteomics (2)
Illumina HiSeq 2000, Illumina Infinium HumanMethylation450 BeadChip, Affymetrix expression array, ILLUMINA (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
Proteogenomics (1)

Instrument Platform

TripleTOF 5600 (12)
Liquid Chromatography MS - negative - reverse phase (8)
Liquid Chromatography MS - positive - reverse phase (8)
Liquid Chromatography MS - alternating - hilic (3)
LTQ XL (2)
Orbitrap Fusion Lumos (2)
Q Exactive (2)
Liquid Chromatography MS - (2)
10X Chromium Controller (1)
Illumina NovaSeq X (1)
Instrument (1)
Bruker maXis ESI Quadrupole TOF (1)
LTQ Orbitrap (1)
Liquid Chromatography MS - negative – rp (1)
Liquid Chromatography MS - positive – rp (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2025 (37)
2024 (36)
2022 (31)
2023 (28)
2021 (20)
2020 (17)
2026 (15)
2015 (15)
2013 (10)
2014 (7)
2012 (7)
2019 (7)
2016 (4)
2010 (4)
2018 (4)
2017 (4)
2011 (3)
2007 (2)
2009 (1)

UNIPROT ID/AC

A0A024RC46 (11)
B3KML9 (11)
B3KT93 (11)
B4DRV9 (11)
B4E3A4 (11)
E9PB61 (11)
G5E972 (11)
G8JLB6 (11)
H0YAR2 (11)
H0YJH7 (11)
I3L4N8 (11)
J9JID7 (11)
O00148 (11)
O00571 (11)
O15523 (11)
O43143 (11)
O43390 (11)
O60506 (11)
O60832 (11)
O94973 (11)
O95678 (11)
O95782 (11)
O95782-2 (11)
P02533 (11)
P02538 (11)
P02545 (11)
P02545-2 (11)
P02545-3 (11)
P02786 (11)
P04259 (11)

ENSEMBL ID

ENSG00000170477 (9)
ENSG00000247315 (4)
ENSG00000147251 (1)

CHEBI ID

CHEBI:28499 (4)
CHEBI:75095 (3)
CHEBI:69187 (3)
CHEBI:26271 (3)
CHEBI:73067 (3)
CHEBI:15882 (3)
CHEBI:17964 (3)
CHEBI:27897 (3)
CHEBI:15354 (3)
CHEBI:167780 (2)
CHEBI:10353 (2)
CHEBI:86534 (2)
CHEBI:38833 (2)
CHEBI:28157 (2)
CHEBI:28235 (2)
CHEBI:2716 (2)
CHEBI:4109 (2)
CHEBI:87429 (2)
CHEBI:47925 (2)
CHEBI:17521 (2)
CHEBI:49584 (2)
CHEBI:16101 (2)
CHEBI:17243 (2)
CHEBI:30778 (2)
CHEBI:80790 (2)
CHEBI:38747 (2)
CHEBI:77131 (2)
CHEBI:3908 (2)
CHEBI:17890 (2)
CHEBI:34687 (2)

Metabolite Name

Phenol (6)
Gallic acid (5)
Quinoline (5)
Pantothenic acid (5)
Adenosine (5)
Spermidine (5)
L-Leucine (5)
Hypoxanthine (5)
Epinephrine (4)
Pyrrole-2-carboxylic acid (4)
Tetradecanoylcarnitine (4)
Vanillic acid (4)
Lumichrome (4)
Xanthurenic acid (4)
Benzyl alcohol (4)
Pyridoxine (4)
Acetylcholine (4)
Choline (4)
Sebacic acid (4)
Indole-3-acetamide (4)
2-Hydroxycinnamic acid (4)
Azelaic acid (4)
Thymidine (4)
L-Tyrosine (4)
Inosine (4)
TG(14:0/15:0/18:1(11Z)) (3)
Isokaempferide (3)
1-Docosanoyl-sn-glycero-3-phosphocholine (3)
DL-alpha-Tocopherol (3)
1,2-Dipentadecanoyl-sn-glycero-3-phosphocholine (3)

Study type

Transcription profiling by array (18)
RNA-seq of coding RNA (12)
ChIP-seq (4)
RNA-seq of non coding RNA (3)
Unknown experiment type (2)
Comparative genomic hybridization by array (2)
Methylation profiling by high throughput sequencing (2)
RNA-seq of coding RNA from single cells (1)

Release Date

2022 (271)
2025 (222)
2023 (212)
2024 (206)
2021 (172)
2020 (127)
2019 (90)
2018 (80)
2017 (55)
2026 (38)
2016 (38)
2015 (38)
2014 (31)
2013 (28)
2012 (16)
2010 (8)
2011 (7)
2009 (3)
2007 (3)
2008 (3)
2006 (2)
2000 (1)

Lab affiliation

Department of Cardiovascular Medicine, Center for Circadian Metabolism and Cardiovascular Disease, Southwest Hospital, Army Medical University; Chongqing, China. (4)
Beijing Key Laboratory for Dairy Cow Nutrition, Beijing University of Agriculture (2)
Department of Medicine, Columbia University Irving Medical Center (2)
Northwest University (2)
1Department of Hematology, Xiangya Hospital, Central South University, Changsha 410080, China 2NHC Key Laboratory of Carcinogenesis, Department of Microbiology, School of Basic Medical Science, Central South University, Changsha 410078, China (1)
Assistant Professor Department of Microbiology Miami University (1)
Bioinformatics Solutions Inc., Waterloo, Ontario, Canada (1)
Brain Tumor Center, Division of Experimental Hematology and Cancer Biology, Cincinnati Children’s Hospital Medical Center, Cincinnati, OH 45229, USA (1)
CAS Center for Excellence in Molecular Plant Science, Chinese Academic on Science (1)
Center for Addiction Research Department of Pharmacology and Toxicology The University of Texas Medical Branch Galveston, TX 77555 (1)
Center for RNA Biology: From Genome to Therapeutics Department of Biochemistry and Biophysics University of Rochester Medical Center Rochester, NY, 14642, USA (1)
Centre for Proteomic Research, B85, Life Sciences Building, University of Southampton, University Road Highfield, Southampton, Hants. SO17 1BJ United Kingdom (1)
China Agricultural University (1)
China-Japan Union Hospital of Jilin University (1)
College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University (1)
College of Horticulture, Nanjing Agricultural University, China (1)
College of Marine Science and Engineering, Nanjing Normal University, Nanjing 210023, China (1)
Department of Biology, Case Western Reserve University, USA Center for Global Health and Disease,Case Western Reserve University, USA (1)
Department of Biomedical Engineering, College of Life Science and Technology, Huazhong University of Science and Technology, N0. 1037 Luoyudong Road, Hongshan District, Wuhan 430074, China. (1)
Department of Ophthalmology, Yangpu Hospital, School of Medicine, Tongji University, Shanghai 200090, China (1)
Department of Pharmaceutical Sciences, University at Buffalo, Buffalo, NY, USA (1)
Department of Stomatology, Nanfang Hospital, Southern Medical University, Guangzhou, China, 510515 (1)
Departments of Critical Care Medicine, the First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, 150001, China. (1)
Fudan University, Huashan Hospital (1)
Harbin medical university (1)
Insilico Meidicine Shanghai Ltd. (1)
Institute for Immunology, School of Medicine, Tsinghua University, Beijing, China. (1)
Institute of Botany, Chinese Academy of Sciences, Beijing, China (1)
Intercollegiate Faculty of Biotechnology, University of Gdansk and Medical University of Gdansk, 58 Abrahama St., 80-307 Gdansk, Poland (1)
Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University, Guangzhou 510632, China (1)

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Research on the quality markers of antioxidant activity of Kai-Xin-San based on spectrum-effect relationship

Kai-Xin-San (KXS) is one of the classic famous traditional Chinese medicine prescriptions for amnesia, which has been applied for thousands of years. Modern pharmacological research has found that KXS has significant therapeutic efficacy on nervous system diseases, which is related to its antioxidan...

2023-12-21 | MTBLS8806 | MetaboLights

Expression data from leaf of (P. tomentosa x P. bolleana) x P. tomentosa under elevated CO2 concentrations

The atmosphere CO2 concentration keeps increasing every year. Use the Affymetrix poplar gene chip to confirm the expression changes in key genes in the triploid white poplar due to the influence of elevated CO2 concentrations. We used microarrays to detail the global programme of gene expression und...

ORGANISM(S): (Populus tomentosa x Populus bolleana) x Populus tomentosa

2014-05-24 | E-GEOD-55216 | biostudies-arrayexpress

Toyoncin, a Novel Leaderless Bacteriocin That Is Produced by Bacillus toyonensis XIN-YC13 and Specifically Targets B. cereus and Listeria monocytogenes.

Not available

S-EPMC8174769 | biostudies-literature

Identification of protein targets for the antidepressant effects of Kai-Xin-San in Chinese medicine using isobaric tags for relative and absolute quantitation.

Not available

S-EPMC6905330 | biostudies-literature

Kai-Xin-San protects against mitochondrial dysfunction in Alzheimer's disease through SIRT3/NLRP3 pathway.

Not available

S-EPMC10012453 | biostudies-literature

Zhang EPESE Extracellular Vesicles Discovery Proteomics

Quantitative LC/MS/MS was performed on 2 uL (1 ug) of each sample, using a nanoAcquity UPLC system (Waters Corp) coupled to a Thermo Orbitrap Fusion Lumos high resolution accurate mass tandem mass spectrometer (Thermo) equipped with a FAIMSPro device via a nanoelectrospray ionization source. Briefly...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2023-07-24 | MSV000092512 | MassIVE

Yi-xin-shu Capsule Ameliorates Cardiac Hypertrophy by Regulating RB/HDAC1/GATA4 Signaling Pathway in Abdominal Aorta Coarctation-Induced Rat Model

Background: Cardiac hypertrophy (CH) is the main pathological basis of malignant cadiovascular diseases such as chronic heart failure (CHF). Mitigating and preventing CH is the key strategy for the treatment of ventricular remodeling in CHF. Yi-Xin-Shu capsule (YXS) is highly applied in clinical tre...

ORGANISM(S): Rattus Rattus

2021-05-26 | PXD026267 |

Kang Le Xin Reduces Blood Pressure Through Inducing Endothelial-Dependent Vasodilation by Activating the AMPK-eNOS Pathway.

Not available

S-EPMC6990110 | biostudies-literature

Zhang Plasma Extracellular Vesicle Proteomics in Healthy Donors

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2023-11-27 | MSV000093511 | MassIVE

Protective effects of GPR37 via regulation of inflammation and multiple cell death pathways after ischemic stroke in mice.

Not available

S-EPMC6766648 | biostudies-literature