Zhang Xu X - OmicsDI

Show results for

Unknown (31654)
Proteomics (782)
Transcriptomics (128)
Metabolomics (99)
Genomics (58)
Multiomics (6)
Other (4)

Organisms

Homo sapiens (243)
Mus musculus (122)
Arabidopsis thaliana (12)
Rattus norvegicus (7)
Zea mays (6)
Oryza sativa (5)
Gallus gallus (5)
Rattus rattus (5)
Drosophila melanogaster (4)
Ovis aries (3)
Danio rerio (3)
Schizosaccharomyces pombe (2)
Saccharomyces cerevisiae (2)
Dugesia japonica (1)
Rhodococcus opacus (1)
Brassica oleracea (1)
Pyropia yezoensis (1)
Capra hircus (1)
Bemisia tabaci (1)
Synechocystis sp. PCC 6803 (1)
Macaca mulatta (1)
Clonorchis sinensis (1)
Oryza sativa Indica Group (1)
Streptococcus suis (1)
Neisseria meningitidis (1)
Setaria italica (1)
Solanum lycopersicum (1)
Oryza sativa Japonica Group (1)
Caenorhabditis elegans (1)
Sus scrofa (1)

Organisms

Sus scrofa (1)
Mus musculus (1)

Repository

pride (467)
iProX (284)
biostudies-arrayexpress (160)
MetaboLights (94)
EGA (24)
MassIVE (24)
GNPS (5)
PeptideAtlas (5)
GPMDB (3)
PAXDB (3)
ENA (2)

Tissue

Cell culture (111)
Epithelial cell (39)
Liver (28)
Brain (24)
Whole body (18)
Plant cell (15)
Blood plasma (12)
Permanent cell line cell (12)
Blood (11)
Blood cell (11)
Leaf (11)
Heart (10)
Testis (10)
Lung (9)
Colon (8)
Embryo (7)
Hepatocyte (7)
Kidney (7)
B cell (6)
Bone marrow (6)
Cell suspension culture (6)
Stem cell (6)
T cell (6)
Blood serum (5)
Macrophage (5)
Neutrophil (5)
Pancreas (5)
Spleen (5)
Others (3)
Male Reproductive System (2)

Disease

Breast cancer (11)
Disease free (11)
Colon cancer (7)
Acute leukemia (6)
Cervix carcinoma (5)
Brain cancer (4)
Cardiovascular system disease (4)
Pancreatic ductal carcinoma (4)
Wounds and Injuries (4)
Not Available (3)
Hepatocellular carcinoma (3)
Liver cancer (3)
Non-alcoholic steatohepatitis (3)
Type 2 diabetes mellitus (3)
Autism spectrum disorder (2)
Cholangiocarcinoma (2)
Dentin caries (2)
Lung adenocarcinoma (2)
Lung cancer (2)
Lymphoma (2)
Malaria (2)
Malignant neoplasm of ovary (2)
Prostate cancer (2)
VSV infection (1)
2-aminoadipic 2-oxoadipic aciduria (1)
Alopecia (1)
Alzheimer's disease (1)
Aortic dissection (1)
Bacterial infectious disease (1)
Chronic myeloid leukemia (1)

Technology Type

Mass Spectrometry (467)
Shotgun proteomics (222)
Mass spectrometry (82)
Bottom-up proteomics (77)
Data-dependent acquisition (44)
Affinity purification coupled with mass spectrometry proteomics (43)
Gel-based experiment (38)
Data-independent acquisition (22)
SWATH MS (18)
Top-down proteomics (14)
Mass spectrometry assay (12)
MSE (6)
Chemical cross-linking coupled with mass spectrometry proteomics (5)
Mass spectrometry imaging (5)
SRM/MRM (5)
Proteogenomics (4)
Affinity proteomics (3)
All-ion fragmentation (2)
Olink affinity proteomics (2)
RNA mass spectrometry (2)
Complete Genomics (COMPLETE_GENOMICS) (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
DiaPASEF (1)
Metaproteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (53)
Liquid Chromatography MS - negative - reverse phase (49)
Liquid Chromatography MS - positive - hilic (8)
Liquid Chromatography MS - negative - hilic (6)
Orbitrap Fusion Lumos (5)
LTQ Orbitrap Velos (5)
Gas Chromatography MS - positive (5)
Q Exactive HF (4)
Liquid Chromatography MS - (4)
Liquid Chromatography MS - positive (4)
Liquid Chromatography MS - alternating - hilic (4)
Instrument (3)
MS:1000031 (3)
Q Exactive (3)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (3)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (3)
Liquid Chromatography MS - negative (3)
Illumina HiSeq 2500 (2)
Illumina NovaSeq 6000 (2)
Illumina HiSeq 2000 (2)
LTQ Orbitrap Velos Pro (2)
TimsTOF Pro (2)
TripleTOF 6600 (2)
Q Exactive HF-X (2)
Illumina HiSeq 1000 (1)
NextSeq 550 (1)
NextSeq 500 (1)
Exactive Plus (1)
LTQ Orbitrap (1)
Orbitrap Elite mass spectrometer(Thermo) (1)

Publication Date

2022 (152)
2025 (130)
2023 (116)
2024 (112)
2021 (103)
2026 (90)
2020 (58)
2019 (55)
2014 (33)
2016 (29)
2015 (29)
2013 (28)
2018 (27)
2010 (24)
2017 (18)
2012 (17)
2011 (11)
2009 (3)
2007 (3)
2008 (2)
2006 (1)
2005 (1)

UNIPROT ID/AC

128UP_DROME (1)
140U_DROME (1)
14331_SOLTU (1)
14332_SOLTU (1)
14335_SOLTU (1)
1433E_DROME (1)
1433Z_DROME (1)
18C_DROME (1)
2AAA_DROME (1)
2ABA_DROME (1)
3HIDH_DROME (1)
4113.PGSC0003DMT400001418 (1)
4113.PGSC0003DMT400002078 (1)
4113.PGSC0003DMT400003947 (1)
4113.PGSC0003DMT400005135 (1)
4113.PGSC0003DMT400005136 (1)
4113.PGSC0003DMT400005427 (1)
4113.PGSC0003DMT400009647 (1)
4113.PGSC0003DMT400009751 (1)
4113.PGSC0003DMT400013958 (1)
4113.PGSC0003DMT400015957 (1)
4113.PGSC0003DMT400016201 (1)
4113.PGSC0003DMT400022438 (1)
4113.PGSC0003DMT400027147 (1)
4113.PGSC0003DMT400027379 (1)
4113.PGSC0003DMT400029003 (1)
4113.PGSC0003DMT400031900 (1)
4113.PGSC0003DMT400034164 (1)
4113.PGSC0003DMT400034190 (1)
4113.PGSC0003DMT400035006 (1)

ENSEMBL ID

ENSG00000170477 (5)
ENSG00000247315 (5)
ENSG00000147251 (4)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:16704 (33)
CHEBI:17596 (30)
CHEBI:17368 (30)
CHEBI:17568 (29)
CHEBI:16750 (29)
CHEBI:17154 (29)
CHEBI:30769 (29)
CHEBI:16708 (28)
CHEBI:16335 (27)
CHEBI:16919 (27)
CHEBI:15354 (27)
CHEBI:17895 (27)
CHEBI:15756 (27)
CHEBI:17295 (26)
CHEBI:15891 (25)
CHEBI:7916 (25)
CHEBI:55328 (24)
CHEBI:16015 (24)
CHEBI:16027 (24)
CHEBI:16828 (24)
CHEBI:17351 (24)
CHEBI:15971 (23)
CHEBI:16040 (23)
CHEBI:17405 (22)
CHEBI:6650 (22)
CHEBI:16196 (22)
CHEBI:17509 (22)
CHEBI:15741 (22)
CHEBI:30915 (22)
CHEBI:16737 (22)

Metabolite Name

Uridine (22)
Uracil (20)
Adenosine (20)
Creatine (19)
L-Arginine (17)
Guanosine (17)
Inosine (17)
Hypoxanthine (17)
L-Histidine (16)
L-Tyrosine (16)
Choline (15)
Taurine (15)
Cytosine (15)
L-Tryptophan (15)
Adenine (15)
Creatinine (15)
Kynurenic acid (14)
Spermidine (14)
Guanine (14)
Palmitic acid (14)
L-Phenylalanine (14)
4-Pyridoxic acid (13)
Azelaic acid (13)
Uric acid (13)
Nicotinamide (12)
Indole (12)
Cholic acid (12)
Cytidine (12)
Xanthine (12)
Thymidine (12)

First Public Date

2022 (1)
2018 (1)

Modification

Not available (1)

Study type

Transcription profiling by array (45)
RNA-seq of coding RNA (43)
ChIP-seq (22)
ChIP-chip by tiling array (10)
Methylation profiling by high throughput sequencing (10)
RNA-seq of non coding RNA (10)
Comparative genomic hybridization by array (6)
Other (3)
Unknown experiment type (2)
Transcription profiling by RT-PCR (2)
Transcription profiling by SAGE (1)
Transcription profiling by tiling array (1)
ATAC-seq (1)
MicroRNA profiling by array (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of total RNA (1)

Release Date

2025 (5294)
2022 (4589)
2023 (4132)
2024 (4080)
2021 (3402)
2020 (2428)
2019 (1604)
2018 (1274)
2017 (1134)
2016 (930)
2026 (714)
2015 (694)
2014 (545)
2013 (300)
2012 (231)
2011 (157)
2010 (107)
2009 (80)
2008 (35)
2007 (25)
2006 (21)
2005 (14)
2004 (13)
2002 (4)
2003 (3)
2001 (3)
2000 (1)

Lab affiliation

University of Ottawa (10)
BMI, Faculty of Medicine, University of Ottawa, Canada (6)
Beijing proteome research center (5)
Zhejiang University (5)
Soochow University (4)
Yangzhou University (4)
Affiliation of Qiutao Xu: State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Agriculture, Guangxi University, Nanning 530004, China (3)
BGI Research (3)
Carnegie Mass Spectrometry Facility (3)
China Agricultural University (3)
Department of Endocrinology, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, China. (3)
School of Life Sciences, Tsinghua University, China (3)
Shanghai Institute of Hematology, State Key Laboratory of Medical Genomics, Collaborative Innovation Center of Hematology, National Research Center for Translational Medicine at Shanghai, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200000, China (3)
Sichuan university (3)
State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, No.1 West Beichen Rd., Beijing 100101, China. (3)
State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, Beijing Proteome Research Center, Beijing Institute of Radiation Medicine, Beijing 102206, China (3)
The Fifth Affiliated Hospital of Guangzhou Medical University (3)
Central South University (2)
Centre for Inflammation Research, Institute for Regeneration and Repair, University of Edinburgh, Edinburgh, UK. (2)
College of Pharmaceutical Sciences Soochow University Yunxuan Building 1328 199 Ren'ai Road, Suzhou, Jiangsu 215123, China (2)
Department of Biochemistry and Department of Metabolic Medicine of the Fourth Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310058, China (2)
Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center (2)
Department of Cardiology, Renmin Hospital of Wuhan University, Wuhan 430060, China (2)
Department of Radiation and Medical Oncology, Zhongnan Hospital of Wuhan University (2)
ETH Zurich (2)
Faculty of Health Sciences, University of Macau, Macau, China (2)
Fudan University (2)
Human Phenome Institute,Zhangjiang FudanInternational Innovation Center, Fudan UniversityShanghai, 201203, China. (2)
Institut Pasteur of Shanghai (2)
Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China (2)

Tags

xref:PubMed:23747202 (1)
xref:PubMed:30457566 (1)
xref:PubMed:32055844 (1)
xref:PubMed:34412677 (1)
xref:PubMed:31903125 (1)

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Diagnostic Potential of Plasma IgG N-glycans in Discriminating Thyroid Cancer from Benign Thyroid Nodules and Healthy Controls

BACKGROUND: Novel biomarkers are urgently needed to distinguish between benign and malignant thyroid nodules and detect thyroid cancer in the early stage. The associations between serum IgG N-glycosylation and thyroid cancer risk have been revealed. We aimed to explore the potent...

2021-09-01 | MTBLS2935 | MetaboLights

Recent insights into farnesoid X receptor in non-alcoholic fatty liver disease.

Not available

S-EPMC4188900 | biostudies-literature

One-step triplex reverse-transcription PCR detection of porcine epidemic diarrhea virus, porcine sapelovirus, and porcine sapovirus.

Not available

S-EPMC6900713 | biostudies-literature

Three new species of the primitively segmented spider genus Songthela (Mesothelae, Liphistiidae, Heptathelinae) from Hunan Province, China

Not available

S-EPMC10194079 | biostudies-literature

The subfamily Xerocomoideae (Boletaceae, Boletales) in China.

Not available

S-EPMC10825750 | biostudies-literature

Xiao-Xu-Ming decoction extract regulates differentially expressed proteins in the hippocampus after chronic cerebral hypoperfusion.

Not available

S-EPMC6334616 | biostudies-literature

Trapdoor spiders of the genus Cyclocosmia Ausserer, 1871 from China and Vietnam (Araneae, Ctenizidae).

Not available

S-EPMC5242268 | biostudies-literature

The complete mitogenome of <i>Eriocrania semipurpurella alpina</i> Xu, 1990 (Lepidoptera: Eriocraniidae).

Not available

S-EPMC12777926 | biostudies-literature

ZIPK mediates endothelial cell contraction through myosin light chain phosphorylation and is required for ischemic-reperfusion injury.

Not available

S-EPMC6662964 | biostudies-literature

Plasma metabolome alteration in dairy cows with left displaced abomasum before and after surgical correction

Left displaced abomasum (LDA) leads to substantial changes in the metabolism of dairy cows. Surgical correction of LDA can rapidly improve the health of cows; however, changes in metabolism following surgery are rarely described. To investigate the changes of plasma metabolome in cows with LDA befor...

2022-08-17 | MTBLS4126 | MetaboLights

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32725 Results

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Organisms

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CHEBI ID

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