Zheng Ji J - OmicsDI

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Unknown (1302)
Proteomics (29)
Transcriptomics (9)
Metabolomics (7)
Genomics (2)

Organisms

Homo sapiens (27)
Mus musculus (8)
Macaca mulatta (1)
Streptococcus suis (1)
Mus (1)
Oryza sativa (1)
Mycobacterium tuberculosis OFXR-32 (1)

Repository

pride (16)
iProX (12)
biostudies-arrayexpress (9)
MetaboLights (7)
EGA (2)
MassIVE (1)

Tissue

Early embryonic cell (6)
Cell culture (5)
Brain (1)
Embryonic stem cell (1)
HeLa cell (1)
Kidney (1)
Liver (1)
Lung (1)
Monocyte (1)
Permanent cell line cell (1)
Testis (1)

Disease

Disease free (3)

Technology Type

Mass Spectrometry (16)
Shotgun proteomics (9)
Mass spectrometry (7)
Affinity purification coupled with mass spectrometry proteomics (5)
Gel-based experiment (3)
Data-dependent acquisition (2)
Bottom-up proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (5)
Liquid Chromatography MS - positive - reverse phase (5)
Orbitrap Elite mass spectrometer(Thermo) (1)
Liquid Chromatography MS - Alternating (LC-MS (Alt)) (1)

Publication Date

2023 (16)
2025 (5)
2022 (5)
2024 (4)
2014 (3)
2021 (3)
2015 (2)
2012 (2)
2020 (2)
2011 (1)
2010 (1)
2019 (1)

CHEBI ID

CHEBI:15756 (4)
CHEBI:16610 (4)
CHEBI:16958 (4)
CHEBI:17012 (4)
CHEBI:17295 (4)
CHEBI:17368 (4)
CHEBI:17568 (4)
CHEBI:17859 (4)
CHEBI:17895 (4)
CHEBI:18344 (4)
CHEBI:27823 (4)
CHEBI:30746 (4)
CHEBI:30769 (4)
CHEBI:64563 (4)
CHEBI:7916 (4)
CHEBI:15354 (3)
CHEBI:15355 (3)
CHEBI:15741 (3)
CHEBI:15793 (3)
CHEBI:15891 (3)
CHEBI:16015 (3)
CHEBI:16020 (3)
CHEBI:16393 (3)
CHEBI:16411 (3)
CHEBI:16467 (3)
CHEBI:16566 (3)
CHEBI:16704 (3)
CHEBI:16708 (3)
CHEBI:16709 (3)
CHEBI:16856 (3)

Metabolite Name

5-Hydroxyindoleacetic acid (3)
Homovanillic acid (3)
L-Isoleucine (3)
Suberic acid (3)
Uracil (3)
(S)-Norcoclaurine (2)
3-Dehydro-2-deoxyecdysone (2)
3-Methylindole (2)
3-Methylxanthine (2)
4-Hydroxyphenylacetaldehyde (2)
4-Nitrophenol (2)
4-Pyridoxic acid (2)
5-Methoxyindoleacetate (2)
6-Hydroxymelatonin (2)
7a,12a-Dihydroxy-3-oxo-4-cholenoic acid (2)
7a-Hydroxy-cholestene-3-one (2)
Acetylcholine (2)
Adipic acid (2)
Aflatoxin B1 (2)
Aminocarb (2)
Aspartame (2)
Asymmetric dimethylarginine (2)
Benzoic acid (2)
Beta-Tyrosine (2)
Butyryl-L-carnitine (2)
Cadaverine (2)
Choline (2)
Citric acid (2)
Creatine (2)
Cyclopentolate (2)

Study type

Transcription profiling by array (3)
RNA-seq of coding RNA (2)
Comparative genomic hybridization by array (1)
Other (1)
Methylation profiling by array (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (194)
2022 (189)
2024 (155)
2021 (136)
2023 (128)
2020 (113)
2019 (59)
2017 (56)
2016 (54)
2015 (53)
2018 (47)
2014 (39)
2026 (31)
2013 (19)
2012 (14)
2011 (8)
2009 (5)
2010 (3)
2008 (3)
2007 (3)
2005 (2)

Lab affiliation

Professor and Chair of Chemical Biology, Peking-Tsinghua Center for Life Sciences Peking University, Beijing, China. Associate Editor, ACS Chemical Biology (2)
Professor and Chair of Chemical Biology, Peking-Tsinghua Center for Life Sciences Peking University, Beijing, China. Executive Editor, ACS Chemical Biology (2)
1 Shanghai Key Laboratory of Tuberculosis, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, PR China 2 Department of Microbiology and Immunology, Tongji University School of Medicine, Shanghai 200049, PR China 3 Clinical Translation Research Center, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, China. (1)
1Peking-Tsinghua Center for Life Sciences, Peking University, Beijing 100871, China 2Academy of Advanced Interdisciplinary Studies, Peking University, Beijing 100871, China 3Synthetic and Functional Biomolecules Center, Beijing National Laboratory for Molecular Sciences, Key Laboratory of Bioorganic Chemistry and Molecular Engineering of Ministry of Education, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China (1)
Biochemistry and Structural Biology Greehey Children's Cancer Research Institute University of Texas Health at San Antonio United States (1)
Department of Pathophysiology, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Rui-Jin Hospital, and State Key Laboratory of Oncogenes and Related Genes and Chinese Academy of Medical Sciences Research Unit (NO.2019RU043), Shanghai Cancer Institute, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China. (1)
Key Laboratory of Cell Proliferation and Differentiation of the Ministry of Education, School of Life Sciences, Peking-Tsinghua Center for Life Sciences, Peking University, Beijing 100871, China (1)
Key Laboratory of Imaging Diagnosis and Minimally Invasive Intervention Research, Fifth Affiliated Hospital of Wenzhou Medical University, Lishui 323000, China (1)
Key Laboratory of Molecular Epigenetics of the Ministry of Education (MOE), Northeast Normal University (1)
NHC Key Laboratory of Diagnosis and Treatment on Brain Functional Diseases, The First Affiliated Hospital of Chongqing Medical University, 1 Youyi Road, Yuzhong District, Chongqing 400016, China; (1)
Professor and Chair of Chemical Biology, Peking-Tsinghua Center for Life Sciences Peking University, Beijing, China. Exceutive Editor, ACS Chemical Biology (lab head) (1)
Sichuan university (1)
Soochow University (1)
The Fourth Affiliated Hospital of Soochow University, Institutes of Biology and Medical Sciences, Suzhou Medical College of Soochow University, Soochow University, Suzhou, China. Jiangsu Key Laboratory of Infection and Immunity, MOE Key Laboratory of Geriatric Diseases and Immunology, Soochow University, Suzhou, China. (1)

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Simulating highly disturbed vegetation distribution: the case of China's Jing-Jin-Ji region.

Not available

S-EPMC7474518 | biostudies-literature

Gut microbiota production of trimethyl-5-aminovaleric acid reduces fatty acid oxidation and accelerates cardiac hypertrophy

Numerous studies found intestinal microbiota alterations which are thought to affect the development of various diseases through the production of gut-derived metabolites. However, the specific metabolites and their pathophysiological contribution to cardiac hypertrophy or heart failure progression ...

2021-12-08 | MTBLS3174 | MetaboLights

Increased SPON1 promotes pancreatic ductal adenocarcinoma progression by enhancing IL-6 trans-signalling.

Not available

S-EPMC9136514 | biostudies-literature

Localized DNA tetrahedrons assisted catalytic hairpin assembly for the rapid and sensitive profiling of small extracellular vesicle-associated microRNAs.

Not available

S-EPMC9714172 | biostudies-literature

mRNA-Seq and microRNA-Seq whole-transcriptome analysis of rhesus monkey ESC neural differentiation revealed the potential rosette neural stem cell regulators

Rosette neural stem cells (R-NSCs) represent early stage of neural development and possess full neural differentiation and regionalization capacities. R-NSCs are considered as stem cells of neural lineage and have important implications in study of neurogenesis and cell replacement therapy. However,...

ORGANISM(S): Macaca mulatta

2014-07-03 | E-GEOD-53260 | biostudies-arrayexpress

Establishing transgenic murine esophageal organoids.

Not available

S-EPMC9048136 | biostudies-literature

Mutation Mapping of 40 Streptococcus suis strains

Streptococcus suis is an important zoonotic pathogen that can cause meningitis and sepsis in both pigs and humans. In this study,we evaluated the genetic difference of 40 Streptococcus suis strains belonging to various sequence types by comparative genomic hybridization to identify genes associated ...

ORGANISM(S): Streptococcus suis

2014-05-20 | E-GEOD-40035 | biostudies-arrayexpress

Hepatocyte Nuclear Factor 3β Plays a Suppressive Role in Colorectal Cancer Progression.

Not available

S-EPMC6817462 | biostudies-literature

A deep learning-based hybrid artificial intelligence model for the detection and severity assessment of vitiligo lesions.

Not available

S-EPMC9201159 | biostudies-literature

Exploitation and Verification of a Stroma- and Metastasis-Associated Risk Prognostic Signature in Pancreatic Adenocarcinoma.

Not available

S-EPMC9696859 | biostudies-literature