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ProteomicsQuantitative proteomics study of Sideroxydans lithotrophicus grown on solid and aqueous Fe (II)
The cells were grown on Fe(II)-citrate as the aqueous Fe(II) source and Fe(II)-smectite as the solid Fe(II) source. Cells were collected on a 0.2 um filter membrane (Millipore GPWP) by filtration. Then cells on the membrane were lysed by vortex in the lysis buffer containing 100 mM Tris/HCl, 10 mM E...
ORGANISM(S): Sideroxydans Lithotrophicus Es-1 (ncbitaxon:580332) 
2022-03-29 | MSV000089149 | MassIVE
ProteomicsMechanisms of microbial magnetite oxidation by Sideroxydans lithotrophicus ES-1
Iron-oxidizing bacteria are widely found in natural and man-made environments where they influence varied biogeochemical cycles. Despite their prevalence, the mechanisms and Fe(II) substrates used by these organisms remain understudied. To date, there has been limited exploration of the ability of i...
ORGANISM(S): Sideroxydans Lithotrophicus (ncbitaxon:63745) 
2024-01-04 | MSV000093770 | MassIVE
ProteomicsPseudomonas putida membrane vesicles
Cellular and membrane vesicle proteomes from Pseudomonas putida KT2440 and engineered derivative strains. Proteomic quantification by diDO-IPTL (Waldbauer et al. 2017 Analytical Chemistry).
ORGANISM(S): Pseudomonas Putida Kt2440 (ncbitaxon:160488) 
2025-01-31 | MSV000097014 | MassIVE
ProteomicsComamonas KF-1 PET degradation
Cellular and extracellular fractions of Comamonas testosteroni KF-1 grown on PET +/- acetate, labeled via diDO-IPTL (Waldbauer et al. 2017 Analytical Chemistry) for protein expression quantitation
ORGANISM(S): Comamonas Testosteroni Kf-1 (ncbitaxon:399795) 
MSV000095794 | MassIVE
ProteomicsPseudomonas putida strains on glucose, aromatics & mixtures
Growth of Pseudomonas putida KT2440 and mt2 on glucose, coumarate, ferulate, and glucose+coumarate & glucose+ferulate mixtures. Quantitation by diDO-IPTL (Waldbauer et al. Anal Chem 2017).
ORGANISM(S): Pseudomonas Putida Kt2440 (ncbitaxon:160488) Pseudomonas Putida Group (ncbitaxon:136845) 
2023-04-21 | MSV000091772 | MassIVE
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