Zhou Yuan Y - OmicsDI

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Unknown (4011)
Proteomics (118)
Metabolomics (23)
Transcriptomics (21)
Genomics (5)
Other (1)
Multiomics (1)

Organisms

Andropogon gerardi (60)
Bacteria (60)
Bartonella quintana JK 31 (60)
Canis lupus familiaris (60)
Clavibacter nebraskensis NCPPB 2581 (60)
Cnidaria (60)
Homo sapiens (36)
Mus musculus (19)
Drosophila melanogaster (3)
Danio rerio (2)
Escherichia coli (2)
Yersinia pestis CO92 (2)
Oryza sativa (2)
Acromyrmex echinatior (1)
Deinococcus gobiensis (1)
Tetrahymena thermophila (1)
502593 (1)
Brassica rapa subsp. chinensis (1)
Bubalus bubalis (1)
Cucumis sativus (1)
Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 (1)
Gryllinae (1)
Hierodula patellifera (1)
Lamprigera yunnana (1)
Locusta migratoria (1)
Periplaneta americana (1)
Rattus norvegicus (1)
Rhipicephalus haemaphysaloides (1)
Saccharomyces cerevisiae (1)
Yersinia pestis biovar Microtus str. 91001 (1)

Repository

pride (60)
iProX (47)
biostudies-arrayexpress (24)
MetaboLights (22)
MassIVE (7)
PeptideAtlas (3)
EGA (2)
GNPS (1)
GPMDB (1)
jPOST (1)

Tissue

Cell culture (15)
Epithelial cell (8)
Permanent cell line cell (5)
Kidney (4)
Heart (3)
Testis (3)
Male Reproductive System (2)
Blood cell (2)
Blood plasma (2)
Brain (2)
HEK-293T cell (2)
Liver (2)
Lung (2)
Sperm (2)
Others (1)
Blood (1)
Blood serum (1)
Early embryonic cell (1)
Electrically active cell (1)
Embryo (1)
Embryonic stem cell (1)
Fibroblast (1)
Follicular fluid (1)
HeLa cell (1)
Hepatocyte (1)
Macrophage (1)
Quadriceps (1)
Regulation of gastric acid secretion (1)
Spleen (1)
Stem cell (1)

Disease

Disease free (6)
Prostate adenocarcinoma (3)
Acute leukemia (2)
Cardiovascular system disease (2)
Not Available (1)
Bone osteosarcoma (1)
Cervix carcinoma (1)
Diffuse gastric cancer (1)
Lemierre's syndrome (1)
Mixed disorder as reaction to stress (1)
Osteoarthritis (1)
Severe acute respiratory syndrome (1)
Stomach cancer (1)
Wiskott-Aldrich syndrome (1)

Technology Type

Mass Spectrometry (60)
Shotgun proteomics (30)
Mass spectrometry (17)
Bottom-up proteomics (12)
Affinity purification coupled with mass spectrometry proteomics (8)
Gel-based experiment (5)
Mass spectrometry assay (3)
Data-dependent acquisition (3)
NMR spectroscopy (2)
Top-down proteomics (2)
Data-independent acquisition (1)
DiaPASEF (1)
Proteogenomics (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
Liquid Chromatography MS - negative - reverse phase (6)
Q Exactive (3)
LTQ Orbitrap Velos (3)
Liquid Chromatography MS - (3)
Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - positive - hilic (3)
Orbitrap Fusion Lumos (2)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (2)
Instrument (1)
Exactive Plus (1)
LTQ Orbitrap (1)
Orbitrap Exploris 480 (1)
6530 Q-TOF LC/MS (Agilent) (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Nuclear Magnetic Resonance (NMR) (1)
Xevo QTof MS (Waters) (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - alternating - hilic (1)
Xevo G2 QTOF (Waters) (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)
LTQ FT (1)

Publication Date

2022 (18)
2025 (17)
2024 (16)
2023 (15)
2021 (11)
2020 (11)
2026 (10)
2015 (9)
2018 (8)
2019 (6)
2016 (5)
2014 (5)
2017 (4)
2013 (3)
2012 (3)
2011 (1)
2010 (1)
2007 (1)

UNIPROT ID/AC

A0A024R563 (3)
A0A087WTX5 (3)
A0A087WYL9 (3)
A0A087X130 (3)
A0A087X1V9 (3)
A0A0A0MS07 (3)
A0A0A0MSA7 (3)
A0M8Q6 (3)
A0MZ66 (3)
A2NUT2 (3)
A5A3E0 (3)
A6NNZ2 (3)
B4DPR2 (3)
B4E3A4 (3)
B7Z2G3 (3)
B7Z2U2 (3)
B7Z9B7 (3)
B7ZME8 (3)
B9A064 (3)
C9JM50 (3)
C9JSZ1 (3)
C9JZR2 (3)
D6RE86 (3)
E5RK69 (3)
E7EVA0 (3)
E9PFZ2 (3)
E9PRE2 (3)
H0Y2V6 (3)
H0Y5B0 (3)
H0Y5C6 (3)

ENSEMBL ID

ENSG00000170477 (3)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000247315 (2)
ENSG00000147251 (1)
ENSG00000204131 (1)

CHEBI ID

CHEBI:17154 (9)
CHEBI:16040 (9)
CHEBI:17568 (9)
CHEBI:17368 (9)
CHEBI:7916 (8)
CHEBI:16704 (8)
CHEBI:16543 (8)
CHEBI:16737 (8)
CHEBI:15354 (8)
CHEBI:17895 (8)
CHEBI:30769 (8)
CHEBI:17597 (7)
CHEBI:17405 (7)
CHEBI:16359 (7)
CHEBI:15891 (7)
CHEBI:17748 (7)
CHEBI:17562 (7)
CHEBI:16235 (7)
CHEBI:18132 (7)
CHEBI:32816 (7)
CHEBI:16450 (7)
CHEBI:17533 (7)
CHEBI:55328 (7)
CHEBI:16919 (7)
CHEBI:15603 (7)
CHEBI:17596 (7)
CHEBI:18344 (7)
CHEBI:16927 (6)
CHEBI:16610 (6)
CHEBI:17203 (6)

Metabolite Name

Creatinine (8)
Uric acid (7)
Cytosine (6)
Uracil (6)
L-Tyrosine (6)
Inosine (6)
Hypoxanthine (6)
Phenol (5)
L-Proline (5)
Xanthurenic acid (5)
N6-Acetyl-L-lysine (5)
4-Pyridoxic acid (5)
Kynurenic acid (5)
Nicotinamide (5)
Adenosine (5)
Guanine (5)
L-Glutamine (5)
Adenine (5)
Cytidine (5)
Uridine (5)
Creatine (5)
L-Valine (5)
DCTP (4)
Leucine (4)
L-Citrulline (4)
Valine (4)
Betaine (4)
L-Lysine (4)
Pyroglutamic acid (4)
Phenylacetaldehyde (4)

Modification

15.994915 (1)
57.021464 (1)

Study type

Transcription profiling by array (11)
RNA-seq of coding RNA (9)
Methylation profiling by high throughput sequencing (2)
Other (1)
ChIP-seq (1)

Release Date

2025 (692)
2022 (604)
2024 (532)
2023 (509)
2021 (439)
2020 (326)
2019 (185)
2018 (171)
2017 (142)
2016 (91)
2026 (91)
2015 (88)
2014 (55)
2013 (39)
2012 (26)
2011 (17)
2009 (10)
2010 (9)
2008 (3)
2007 (3)
2005 (2)
2006 (1)

Lab affiliation

BGI Research (3)
Departments of Surgery and Biomedical Sciences Cedars-Sinai Medical Center Los Angeles, CA 90048 (3)
Department of Biochemistry and Structural Biology and Center for Innovative Drug Discovery School of Medicine, University of Texas Health Science Center at San Antonio, 7703 Floyd Curl Drive, San Antonio, TX 78229, United States (2)
Huazhong University of Science and Technology (2)
Anonymity for double-blind review (1)
BGI-Shenzhen (1)
Beijing Advanced Innovation Center for Soft Matter Science and Engineering, Beijing University of Chemical Technology (1)
Beijing Key Laboratory for Prevention and Control of Infectious Diseases in Livestock and Poultry, Institute of Animal Husbandry and Veterinary Medicine, Beijing Academy of Agriculture and Forestry Sciences, Haidian District, Beijing, China. (1)
Bioscience Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Kingdom of Saudi Arabia (1)
Center for Cell Lineage and Development, CAS Key Laboratory of Regenerative Biology, Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, GIBH-HKU Guangdong-Hong Kong Stem Cell and Regenerative Medicine Research Centre, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, China. (1)
Center for Proteomics & Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (1)
Centre for Membrane Interactions and Dynamics, Department of Biomedical Science, University of Sheffield, Sheffield (1)
College of Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China (1)
Daping Hospital of AMU (1)
Department of Chemical Biology College of Chemistry and Molecular Engineering Peking University (1)
Department of Nephrology, the First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, China (1)
Department of Pharmacodynamics, College of Pharmacy, University of Florida, Gainesville, FL, USA (1)
Department of Pharmacodynamics, University of Florida (1)
Department of Physiology and Biophysics University of Mississippi Medical Cente (1)
Department of Physiology and Biophysics University of Mississippi Medical Center (1)
Department of pathophysiology, School of Basic Medical Sciences, Wuhan University, Wuhan 430071, China (1)
Departments of Cancer Genetics and Epigenetics Beckman Research Institute, City of Hope, Duarte, CA 91007, USA (1)
Departments of Critical Care Medicine, the First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, 150001, China. (1)
Dept. of Orthopaedics and Traumatology The Chinese University of Hong Kong, Hong Kong, China (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Experimental Radiation Oncology, The University of Texas, MD Anderson Cancer Center (1)
Guizhou University (1)
HHubei Academy of Agricultural Sciences, Wuhan, China ubei Academy of Agricultural Sciences, Wuhan, China (1)
Huazhong Agricultural University (1)
Institute of Reproductive Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan 430030, China. (1)

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Identification of kinship and occupant status in Mongolian noble burials of the Yuan Dynasty through a multidisciplinary approach.

Not available

S-EPMC4275886 | biostudies-literature

Differentially expressed proteins between WT Y. pestis and ΔhmwC

ORGANISM(S): Yersinia Pestis Co92

PXD042928 |

Comprehensive profiling of lysine acetylome in Yersinia pestis

Yersinia pestis is a lethal pathogen responsible for millions of human deaths in three worldwide pandemics.The global acetylome analyses of Y. pestis grown under conditions mimicking two typical niches, i.e., the mammalian host (Mh) and the flea vector (Fv), were performed.

ORGANISM(S): Yersinia Pestis Biovar Microtus Str. 91001

2023-07-06 | PXD038124 |

Repair of Adult Mammalian Heart After Damages by Oral Intake of Gu Ben Pei Yuan San.

Not available

S-EPMC6541202 | biostudies-literature

Comparative metabolomic analysis of exudates of microcystin-producing and microcystin-free Microcystis aeruginosa strains

Cyanobacterial harmful algal blooms (cHABs) dominated by Microcystis aeruginosa threaten the ecological integrity and beneficial uses of lakes globally. In addition to producing hepatotoxic microcystins (MC), M. aeruginosa exudates (MaE) contain various compounds with demonstrat...

2023-01-16 | MTBLS6603 | MetaboLights

Shen-Yuan-Dan Capsule Attenuates Verapamil-Induced Zebrafish Heart Failure and Exerts Antiapoptotic and Anti-Inflammatory Effects via Reactive Oxygen Species-Induced NF-κB Pathway.

Not available

S-EPMC7959770 | biostudies-literature

Decreased temporal variabilities of functional connectivities in insula and lingual gyrus are associated with better early treatment response in patients with panic disorder.

Not available

S-EPMC11573430 | biostudies-literature

A Novel Bispecific Antibody Targeting CD3 and Lewis Y with Potent Therapeutic Efficacy against Gastric Cancer.

Not available

S-EPMC8393954 | biostudies-literature

Therapeutic potential of living donor liver transplantation from heterozygous carrier donors in children with propionic acidemia.

Not available