Zhu Ji J - OmicsDI

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Unknown (1964)
Proteomics (55)
Transcriptomics (15)
Metabolomics (8)
Multiomics (3)
Genomics (2)
Other (2)
Genomic (1)

Organisms

Bombyx mori (28)
Onchocerca volvulus (28)
Klebsiella pneumoniae (28)
Musca domestica (28)
Brugia malayi (28)
Schizosaccharomyces pombe (28)
Cnidaria (28)
Streptomyces coelicolor A3(2) (28)
Sus scrofa (28)
Human immunodeficiency virus 1 (28)
Oryza sativa Indica Group (28)
Sinorhizobium meliloti BL225C (28)
Vitis (28)
Sus scrofa domesticus (28)
Ostreococcus tauri (28)
Saccharomyces cerevisiae (28)
Synechocystis sp. PCC 6803 (28)
Olavius algarvensis Gamma 1 endosymbiont (28)
Vitis vinifera (28)
Saccharopolyspora erythraea (28)
Staphylococcus aureus (28)
Homo sapiens (25)
Mus musculus (8)
Arabidopsis thaliana (3)
Macaca mulatta (1)
Zea mays (1)
Plasmodium falciparum (1)
Pyricularia oryzae 70-15 (1)
Rattus norvegicus (1)
Mus (1)

Repository

pride (28)
iProX (22)
biostudies-arrayexpress (15)
MassIVE (6)
MetaboLights (6)
EGA (2)
GNPS (2)
dbGaP (1)
GPMDB (1)

Tissue

Cell culture (10)
Early embryonic cell (6)
Liver (6)
Skin (2)
Prostate adenocarcinoma cell (1)
Mesenchymal stem cell of the bone marrow (1)
Osteoblast (1)
Bone cell (1)
Stomach (1)
Embryonic stem cell (1)
Plant cell (1)
Blood serum (1)
Stem cell (1)
HeLa cell (1)
Rosette (1)
Erythrocyte (1)
Hepatocyte (1)
Permanent cell line cell (1)
Epithelial cell (1)
T cell (1)

Disease

Disease free (5)
Non-alcoholic steatohepatitis (2)
Not Available (1)
Bone giant cell tumor (1)
Stomach cancer (1)
Brain glioblastoma multiforme (1)
Osteosarcoma (1)
Prostate adenocarcinoma (1)
Cervical cancer (1)
Acute leukemia (1)

Technology Type

Mass Spectrometry (28)
Shotgun proteomics (15)
Mass spectrometry (6)
Gel-based experiment (6)
Affinity purification coupled with mass spectrometry proteomics (4)
SWATH MS (3)
Bottom-up proteomics (2)
Proteogenomics (1)
All-ion fragmentation (1)
SRM/MRM (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Q Exactive (4)
LTQ Orbitrap Elite (4)
Liquid Chromatography MS - positive - reverse phase (2)
Instrument (1)
Quattro micro API (Waters) (1)
GCMS-QP2010 Plus (Shimadzu) (1)
Agilent 5975E GC/MSD (Agilent) (1)
Gas Chromatography MS - (1)
API 4000 QTRAP (AB Sciex) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2023 (11)
2022 (11)
2021 (8)
2019 (7)
2024 (7)
2015 (5)
2010 (5)
2026 (5)
2025 (5)
2017 (3)
2013 (2)
2020 (2)
2011 (1)
2009 (1)
2008 (1)
2018 (1)

CHEBI ID

CHEBI:30531 (3)
CHEBI:28053 (3)
CHEBI:28842 (3)
CHEBI:18101 (3)
CHEBI:30746 (3)
CHEBI:17620 (3)
CHEBI:15756 (3)
CHEBI:17992 (3)
CHEBI:17351 (3)
CHEBI:55328 (3)
CHEBI:16411 (3)
CHEBI:15940 (3)
CHEBI:17596 (3)
CHEBI:165589 (2)
CHEBI:18198 (2)
CHEBI:27722 (2)
CHEBI:15963 (2)
CHEBI:28412 (2)
CHEBI:490095 (2)
CHEBI:1883 (2)
CHEBI:15584 (2)
CHEBI:15547 (2)
CHEBI:17025 (2)
CHEBI:18385 (2)
CHEBI:15864 (2)
CHEBI:12936 (2)
CHEBI:78697 (2)
CHEBI:36219 (2)
CHEBI:17505 (2)
CHEBI:18305 (2)

Metabolite Name

Pentadecanoyl-EA (2)
C17 Sphinganine (2)
C16 Sphinganine (2)
Glycerol (2)
Phytosphingosine (2)
Mannitol (2)
Cellobiose (2)
Sucrose (2)
Phosphatidylcholine (16:0/18:1) (1)
2-(6-hydroxy-6-methyloctyl)-2H-furan-5-one (1)
[3-[2-aminoethoxy(hydroxy)phosphoryl]oxy-2-[(4Z,7Z)-octadeca-4,7-dienoyl]oxypropyl] octadecanoate (1)
PS(P-18:0/12:0) (1)
2-(1-Methylpropyl)-4,6-dinitrophenol (1)
Glycerol-3-Phosphate (1)
Alpha-Linolenate (1)
(9E)-Octadecenoic Acid (1)
PI-Cer(t18:0/20:0(2OH)) (1)
4-vinylphenol dimer (1)
5-hydroxy-3-indoleacetic acid (1)
Indole-3-lactate (1)
Indol-3-acetic acid (1)
Talose (1)
3-3-hydroxyphenylpropionic acid (1)
1,2-cyclohexanedione (1)
Benzoylformic acid (1)
Trans-3-hexenedioic acid (1)
L-allothronine (1)
M-cresol (1)
Eicosanoic Acid (1)
Hexadecanoic Acid (1)

Study type

Transcription profiling by array (9)
RNA-seq of non coding RNA (4)
RNA-seq of coding RNA (2)

Release Date

2025 (303)
2022 (263)
2024 (234)
2023 (233)
2021 (214)
2020 (187)
2019 (113)
2018 (72)
2017 (68)
2016 (60)
2015 (57)
2026 (54)
2014 (34)
2013 (28)
2011 (14)
2012 (14)
2010 (12)
2009 (7)
2008 (6)
2003 (3)
2007 (2)
2006 (1)

Lab affiliation

Beijing Key Laboratory of Protein Posttranslational Modifications and Cell Function, Department of Biochemistry and Biophysics, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, 100191, China. (2)
Professor and Chair of Chemical Biology, Peking-Tsinghua Center for Life Sciences Peking University, Beijing, China. Associate Editor, ACS Chemical Biology (2)
SIMM (2)
Professor and Chair of Chemical Biology, Peking-Tsinghua Center for Life Sciences Peking University, Beijing, China. Executive Editor, ACS Chemical Biology (2)
Department of Cardiology, Renmin Hospital of Wuhan University, Wuhan 430060, China (2)
Institute of Model Animal of Wuhan University, Wuhan, China. (1)
Department of Burn Surgery, the First Affiliated Hospital of Naval Medical University, Shanghai, People’s Republic of China; Research Unit of key techniques for treatment of burns and combined burns and trauma injury, Chinese Academy of Medical Sciences, Shanghai, China. (1)
1Peking-Tsinghua Center for Life Sciences, Peking University, Beijing 100871, China 2Academy of Advanced Interdisciplinary Studies, Peking University, Beijing 100871, China 3Synthetic and Functional Biomolecules Center, Beijing National Laboratory for Molecular Sciences, Key Laboratory of Bioorganic Chemistry and Molecular Engineering of Ministry of Education, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China (1)
School of Life Sciences, Westlake University, Hangzhou, Zhejiang Province, China (1)
Ning Lab, Life Science Division of HKUST， China (1)
Department of General Practice, The Third Affiliated Hospital of Guangzhou Medical University, Guangzhou Medical University (1)
Nanjing Medical University (1)
Professor and Chair of Chemical Biology, Peking-Tsinghua Center for Life Sciences Peking University, Beijing, China. Exceutive Editor, ACS Chemical Biology (lab head) (1)
Department of Surgery, University of Michigan, USA (1)
Institute of Molecular Systems Biology, ETH Zurich, Switzerland (1)
The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China; The First Affiliated Hospital of Harbin Medical University (1)
State Key Laboratory of Natural Medicines, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing 210009, China (1)
Shanghai Institute of Materia Medica, Chinese Academy of Sciences (1)
Department of Biology, Institute of Molecular Systems Biology, ETH, Zurich, Switzerland (1)
National Center for Protein Sciences (The PHOENIX center, Beijing) (1)
Molecular Medicine Partnership Unit (MMPU), Heidelberg University, Heidelberg, Germany Department of Pediatric Oncology, Hematology and Immunology, Heidelberg University Hospital, Heidelberg, Germany (1)
1Division of Hematology/Oncology, Boston Children’s Hospital and Department of Pediatric Oncology, Dana-Farber Cancer Institute (DFCI), Harvard Stem Cell Institute, Harvard Medical School, Howard Hughes Medical Institute, Boston, MA 02115, USA (1)
Zhejiang University, China (1)

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The histone methyltransferase Setd2 is indispensable for V(D)J recombination.

Not available

S-EPMC6659703 | biostudies-literature

Quantitative time-course profiling of Plasmodium falciparum transcripts and proteins throughout the 48-hour intraerythrocytic developmental cycle

Quantitative studies of the P. falciparum transcriptome have shown that the tightly controlled progression of the parasite through the intraerythrocytic developmental cycle (IDC) is accompanied by a continuous gene expression cascade where most expressed genes exhibit a single transcriptional peak. ...

ORGANISM(S): Plasmodium falciparum

2011-06-07 | E-GEOD-24416 | biostudies-arrayexpress

Gan-jiang-ling-zhu decoction improves steatohepatitis by regulating gut microbiota-mediated 12-tridecenoic acid inhibition.

Not available

S-EPMC11377346 | biostudies-literature

Identification of potential anti-pneumonia pharmacological components of Glycyrrhizae Radix et Rhizoma after the treatment with Gan An He Ji oral liquid.

Not available

S-EPMC9805948 | biostudies-literature

GPAA1 promotes gastric cancer progression via upregulation of GPI-anchored protein and enhancement of ERBB signalling pathway.

Not available

S-EPMC6532258 | biostudies-literature

Targeting the CCL5/CCR5 axis in tumor-stromal crosstalk to overcome cisplatin resistance in neuroendocrine prostate cancer.

Not available

S-EPMC12570517 | biostudies-literature

Reconstruction Methods and Complications of Esophagogastrostomy and Jejunal Interposition in Proximal Gastrectomy for Gastric Cancer: A Meta-Analysis.

Not available

S-EPMC7201443 | biostudies-literature

Explaining combinatorial effects of mycotoxins Deoxynivalenol and Zearalenone in mice with urinary metabolomic profiling

Urine metabolic profiling of mice was conducted utilizing gas chromatography-mass spectrometry (GC-MS) to investigate the combinatory effect of mycotoxins deoxynivalenol (DON) and zearalenone (ZEN) on the metabolism of the mice. Experiments were conducted by means of five-week-old mice which were in...

2021-02-11 | MTBLS580 | MetaboLights

Long-Term Results of Pediatric Liver Transplantation for Progressive Familial Intrahepatic Cholestasis.

Not available

S-EPMC9410346 | biostudies-literature

Randomized controlled trial: moxibustion and acupuncture for the treatment of Crohn's disease.

Not available

S-EPMC4138481 | biostudies-literature