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ProteomicsFGF13 in septic lung injury: A regulator of the ERK/aerobic glycolysis axis in the inflammatory state
HEK293T cells were transfected with Flag-FGF13 plasmids, and cells were performed with immunoprecipitation by Flag antibody or IgG (CST, 3900, USA) with protein A/G beads (Meck, LSKMAGAG10, USA). Coimmunoprecipitation was carried out in HEK293T cells and visualized with silver staining by using the ...
ORGANISM(S): Homo sapiens (Human) 
2025-12-17 | PXD057743 | Pride
MetabolomicsTranscriptome and metabolome changes in Chinese cedar during cold acclimation reveal the roles of flavonoids in needle discoloration and cold resistance

Cryptomeria fortunei growth and development are usually affected by low temperatures. Despite the evergreen nature of this species, most needles turn yellowish-brown in cold winters. The underlying discoloration mechanisms that cause this phenomenon in response to cold acclimation remain...

2022-08-12 | MTBLS3184 | MetaboLights
UnknownAltered Cellular White Matter But Not Extracellular Free Water on Diffusion MRI in Individuals at Clinical High Risk for Psychosis.
Not available
S-EPMC7142275 | biostudies-literature
ProteomicsNeofusiccocum parvum mycelium LC-MS/MS
TMT quantitative proteome of BH01 and BH03 of two Neofusiccocum parvum strains under different culture conditions
ORGANISM(S): Neofusicoccum Parvum 
2022-06-03 | PXD034277 |
TranscriptomicsmiR-222 is necessary for exercise-induced cardiac growth and protects against pathological cardiac remodeling.
miR-222 overexpression leads to promotion of proliferation and hypertrophy and inhibition of apoptosis in in primary neonatal rat ventricular cardiomyocytes (NRVMs). Isolated primary neonatal rat ventricular cardiomyocytes were plated in 6 cm BD Primaria tissue culture dishes. Transfection of microR...
ORGANISM(S): Rattus norvegicus 
2016-03-03 | E-GEOD-59641 | biostudies-arrayexpress
ProteomicsRice OsFIE2-FLAG IP-MS analysis
To analyze the interaction proteins of Polycomb complex PRC2 in rice, we used the FIE2-FLAG transgenic material to perform IP-MS analysis.
ORGANISM(S): Oryza Sativa 
2022-04-22 | PXD033370 |
ProteomicsIdentifying interaction proteins of METTL3 and METTL14 using APEX2-based labeling and mass spectroscopy
During translation, protein quality control systems play an active role in ensuring the proper folding and assembly of proteins. To investigate the auxiliary factors that facilitate the folding and assembly of METTL3-METTL14, we employed proximity labeling technology using the split APEX2 system
ORGANISM(S): Homo Sapiens 
2025-12-05 | PXD071685 |
ProteomicsProteomic Antibacterial Characterization of Flavonoid Xanthohumol and probiotic Clostridium butyricum on Pathogenic Clostridioides difficile
In this study, we evaluated the antimicrobial properties of XN and C. butyricum culture supernatant (CBs) against C. difficile, focusing on their ability to reduce C. difficile adhesion, inhibit growth, and restrict toxin production. Using a dextran sulfate sodium (DSS)-induced Caco-2 intestinal epi...
ORGANISM(S): Clostridioides Difficile 70-100-2010 Clostridioides Difficile Atcc 9689 = Dsm 1296 
2025-10-21 | PXD069714 |
ProteomicsOTUD6A promotes prostate tumorigenesis via deubiquitinating Brg1 and AR
To explore the underlying mechanism by which OTUD6A induces PCa progression, we identified its binding proteins with an immunoprecipitation (IP)-mass spectrometry (MS) approach in two CRPC cell lines.
ORGANISM(S): Homo Sapiens 
2022-01-28 | PXD031307 |
ProteomicsAnalysis of the structure of the MTA1 complex using chemical cross-linking mass spectrometry
Analysis of the structure of the MTA1 complex using chemical cross-linking mass spectrometry
ORGANISM(S): Tetrahymena Thermophila Sb210 
2022-11-30 | PXD038459 |
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