Zhu Xue X - OmicsDI

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Unknown (1433)
Proteomics (129)
Metabolomics (24)
Transcriptomics (4)
Multiomics (3)
Genomics (2)
Other (1)

Organisms

Homo sapiens (82)
Schizophyllum commune H4-8 (22)
Mycobacterium tuberculosis SP7 (22)
Oryza sativa Japonica Group (22)
Candidatus Endoriftia persephonae (22)
Mycobacterium tuberculosis SP10 (22)
Mycobacterium tuberculosis SP13 (22)
Mycobacterium tuberculosis SP22 (22)
Enterobacter ludwigii (22)
Chlamydomonas reinhardtii (22)
Lama (22)
Pyricularia oryzae P131 (22)
Enterococcus mundtii CRL35 (22)
Oncorhynchus tshawytscha (22)
Pseudomonas canadensis (22)
Strongylocentrotus purpuratus (22)
Influenza A virus (A/California/04/2009(H1N1)) (22)
Homo (22)
Pseudomonas aeruginosa PAO1H2O (22)
Human alphaherpesvirus 1 strain 17 (22)
Quercus petraea (22)
Canis lupus (22)
Mus musculus (12)
Saccharomyces cerevisiae (4)
Scutellaria baicalensis (2)
Rattus norvegicus (1)
Aeromonas veronii (1)
Arabidopsis thaliana (1)
Escherichia coli (1)
Halobacterium salinarum NRC-1 (1)

Repository

PeptideAtlas (63)
iProX (42)
pride (22)
MetaboLights (20)
biostudies-arrayexpress (5)
GNPS (4)
MassIVE (3)
EGA (1)

Tissue

Liver (44)
Epithelial cell (4)
Liver (4)
Others (3)
Cell culture (3)
Plasma Non-glyco (2)
Testis (2)
Sperm (2)
Thyroid nodule (1)
Prostate adenocarcinoma cell (1)
Pancreatic ductal cell (1)
Adipocyte (1)
Cell suspension culture (1)
Plant cell (1)
Pancreas (1)
Brain (1)
Leaf (1)

Disease

Pancreatic cancer (3)
Thyroid cancer (1)
Non-small cell lung carcinoma (1)
Prostate adenocarcinoma (1)
Breast cancer (1)
Disease free (1)

Technology Type

Mass Spectrometry (22)
Mass spectrometry (18)
Shotgun proteomics (11)
Bottom-up proteomics (4)
SWATH MS (4)
Mass spectrometry assay (2)
Gel-based experiment (2)
DiaPASEF (1)
SRM/MRM (1)
Data-dependent acquisition (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)

Instrument Platform

Unknown (29)
LCQ DECA XP PLUS (15)
Liquid Chromatography MS - positive - reverse phase (9)
Liquid Chromatography MS - negative - reverse phase (8)
LCQ Classic (6)
LTQ (6)
Q Exactive (3)
LCQ DECA XP (3)
TripleTOF 6600 (2)
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6530 Q-TOF LC/MS (Agilent) (2)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
Micromass Q-ToF (2)
LCQ DECA (2)
Wates I-Class/XEVO-G2 XS QTOF (1)
Quattro micro API (Waters) (1)
Agilent 5975E GC/MSD (Agilent) (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Xevo G2 QTOF (Waters) (1)
API 4000 QTRAP (AB Sciex) (1)
Liquid Chromatography MS - negative - HILIC (1)

Publication Date

2021 (14)
2023 (12)
2020 (11)
2019 (10)
2025 (9)
2022 (9)
2026 (4)
2024 (4)
2017 (4)
2004 (3)
2014 (2)
2006 (2)
2015 (1)
2012 (1)
2009 (1)
2018 (1)
2005 (1)
2002 (1)
2001 (1)

UNIPROT ID/AC

P31327 (38)
P63261 (34)
P60709 (34)
B4E3A4 (34)
P25705 (33)
A5A3E0 (32)
P06576 (32)
Q9BYX7 (30)
P68133 (29)
P68032 (29)
P04264 (29)
P07477 (28)
P63267 (28)
P62736 (28)
I3L4N8 (28)
P69892 (28)
P69891 (28)
P00367 (28)
Q13707 (27)
P35908 (27)
Q9BQE3 (27)
P68363 (27)
Q7Z794 (26)
P13645 (26)
P0CG38 (26)
P05787 (26)
P02792 (26)
Q562R1 (26)
P49448 (26)
P0CG39 (25)

ENSEMBL ID

ENSG00000170477 (4)

CHEBI ID

CHEBI:27897 (7)
CHEBI:17368 (7)
CHEBI:30769 (6)
CHEBI:16704 (6)
CHEBI:17521 (6)
CHEBI:16708 (6)
CHEBI:16811 (5)
CHEBI:28875 (5)
CHEBI:28790 (5)
CHEBI:28997 (5)
CHEBI:55328 (5)
CHEBI:17895 (5)
CHEBI:15756 (5)
CHEBI:17295 (5)
CHEBI:64563 (5)
CHEBI:16828 (5)
CHEBI:17191 (5)
CHEBI:17620 (5)
CHEBI:17596 (5)
CHEBI:16566 (5)
CHEBI:16335 (5)
CHEBI:16750 (5)
CHEBI:29016 (4)
CHEBI:28834 (4)
CHEBI:22652 (4)
CHEBI:16525 (4)
CHEBI:15843 (4)
CHEBI:27226 (4)
CHEBI:16610 (4)
CHEBI:18295 (4)

Metabolite Name

Adenine (6)
Guanosine (5)
Uracil (4)
L-Tyrosine (4)
Hypoxanthine (4)
L-Isoleucine (4)
Citric acid (4)
Taurine (4)
Adenosine (4)
Thymidine (4)
Inosine (4)
Uridine (4)
Sucrose (4)
Gingerol (3)
N-Acetyl-L-methionine (3)
Deoxycholic acid (3)
Benzyl alcohol (3)
Histamine (3)
L-Arginine (3)
Xanthosine (3)
Hydroxyprolyl-Lysine (3)
1,11-Undecanedicarboxylic acid (3)
Yucalexin P15 (3)
2-Hydroxy-desipramine glucuronide (3)
Phthalic acid (3)
N-Acetyl-9-O-acetylneuraminic acid (3)
L-Histidine (3)
2'-O-Methyladenosine (3)
Vanillic acid (3)
Glyceryl 5-hydroxydecanoate (3)

Study type

Transcription profiling by array (2)
RNA-seq of coding RNA (2)
Methylation profiling by high throughput sequencing (1)

Release Date

2025 (240)
2022 (223)
2024 (203)
2023 (193)
2021 (146)
2020 (108)
2019 (63)
2016 (51)
2018 (50)
2026 (39)
2017 (39)
2014 (25)
2015 (21)
2013 (11)
2012 (6)
2009 (4)
2010 (4)
2011 (3)
2008 (3)
2002 (2)
2007 (1)
2006 (1)
2005 (1)
2003 (1)

Lab affiliation

University at buffalo, SUNY (3)
Department of Clinical Laboratory, Shanghai Tenth People’s Hospital of Tongji University, Shanghai, 200072, China (3)
Abbvie Bioresearch Center (2)
School of Medicine, School of Life Sciences, Westlake University, Hangzhou, Zhejiang, China. (1)
MOE Key Laboratory of Bioinformatics, Center for Synthetic and Systematic Biology, School of Life Sciences, Tsinghua University, Beijing 100084, ChinaMOE Key Laboratory of Bioinformatics, Center for Synthetic and Systematic Biology, School of Life Sciences, Tsinghua University, Beijing 100084, China (1)
Cancer Stem Cell and Translation Medicine Lab, Innovative Cancer Drug Research and Development Engineering Center of Liaoning Province, Department of Oncology, Shengjing Hospital of China Medical University, Shenyang, 110004, China (1)
Department of General Surgery, Pancreatic Disease Center, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China. (1)
Department of Immunology, School of Basic Medical Sciences, Peking University (1)
Department of Pharmaceutical Sciences, University at Buffalo, Buffalo, New York, United State (1)
School of Life Sciences, Westlake University, Hangzhou, Zhejiang Province, China (1)
Florence and Herbert Irving Endowed Professor of Medicine Columbia University Irving Medical Center (1)
Beijing proteome research center (1)
Westlake University (1)
Department of Biology, Institute of Molecular Systems Biology, ETH, Zurich, Switzerland (1)
Huazhong Agricultural University (1)
Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops, Key Laboratory of Plant Functional Genomics of the Ministry of Education, Yangzhou University, Yangzhou 225009,China (1)
Northwest University (1)

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Ameliorative effects of Xue-Fu-Zhu-Yu decoction, Tian-Ma-Gou-Teng-Yin and Wen-Dan decoction on myocardial fibrosis in a hypertensive rat mode.

Not available

S-EPMC4744408 | biostudies-literature

PTB CLIP-seq

Recent transcriptome analysis indicates that >90% of human genes undergoes alternative splicing, underscoring the contribution of differential RNA processing to diverse proteomes in higher eukaryotic cells. The polypyrimidine tract binding protein PTB is a well-characterized splicing repressor, but ...

ORGANISM(S): Homo sapiens

2009-12-24 | E-GEOD-19323 | biostudies-arrayexpress

Multimethodological and multiscale investigation of the therapeutic mechanism of Qian Ji Sheng Xue Pian in treating primary immune thrombocytopenia.

Not available

S-EPMC12797464 | biostudies-literature

Shen-Ling-Bai-Zhu-San (SL) and SL Derived-Polysaccharide (PL) Ameliorate the Severity of Diarrhea-Induced by High Lactose via Modification of Colonic Fermentation.

Not available

S-EPMC9273845 | biostudies-literature

Predict potential pharmacological mechanisms of Ling-gui-Zhu-gan Decoction in treating unstable angina pectoris using liquid chromatography-mass spectrometry and network pharmacology.

Not available

S-EPMC12358372 | biostudies-literature

The analgesic effects of Yu-Xue-Bi tablet (YXB) on mice with inflammatory pain by regulating LXA4-FPR2-TRPA1 pathway.

Not available

S-EPMC11302111 | biostudies-literature

Expression profile in Overexpression of GST,GST-Med3

We have used microarrays to study the gene expression changes in Overexpression of GST,GST-Med3 of yeast cells to detect how the overexpressioin may affect global gene expression. RNA samples were taken from yeast cells overexpressed GST or GST-med3 and hybridized to affymetrix microarrays: GST an...

ORGANISM(S): Saccharomyces cerevisiae

2015-08-06 | E-GEOD-65666 | biostudies-arrayexpress

Multienergy x-ray imaging enabled by unipolar perovskite detector for intelligent substance identification.

Not available

S-EPMC12758516 | biostudies-literature

Dysregulated CRMP Mediates Circadian Deficits in a Drosophila Model of Fragile X Syndrome.

Not available

S-EPMC8275672 | biostudies-literature

Liver X Receptor Agonism Sensitizes a Subset of Hepatocellular Carcinoma to Sorafenib by Dual-Inhibiting MET and EGFR.

Not available

S-EPMC6911865 | biostudies-literature